| Literature DB >> 28009985 |
Yunhe Gao1, Kecheng Zhang1, Hongqing Xi1, Aizhen Cai1, Xiaosong Wu1, Jianxin Cui1, Jiyang Li1, Zhi Qiao1, Bo Wei1, Lin Chen1.
Abstract
BACKGROUND: Circulating tumor DNA (ctDNA) has offered a minimally invasive approach for detection and measurement of gastric cancer (GC). However, its diagnostic and prognostic value in gastric cancer still remains unclear.Entities:
Keywords: ctDNA; diagnosis; gastric cancer; meta-analysis; prognosis
Mesh:
Substances:
Year: 2017 PMID: 28009985 PMCID: PMC5351635 DOI: 10.18632/oncotarget.14064
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow chart of selection process to enroll eligible studies
Major characteristics of enrolled studies
| No. | Study | Number | Sex (M/F) | region | Detection method | Target gene | HR | Follow up | AT | SS | ST | BV (ml) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | WK Leung8 | 60 | / | Hongkong | MSP | APC/E-cadherin | OS:3.38(1.42-8.05) (F) | 8 (0–40) | Methylation | Serum | BS | 0.8 |
| 2 | Mohammad R.A.9 | 52 | 38/14 | Iran | MSP | P16 | / | / | Hypermethylation | Serum | BS | / |
| 3 | Wang YC10 | 47 | 29/18 | China | MSP | RASSF1A | / | / | Hypermethylation | serum | BS | 5 |
| 4 | Chouhei.S11 | 65 | 37/28 | Japan | qMSP | RUNX3 | / | / | Methylation | Serum | BS | / |
| 5 | Kenji H.12 | 73 | 57/16 | Japan | qMSP | TFPI2 | / | / | Methylation | Serum | TOS | / |
| 6 | Ioanna B.13 | 73 | 51/22 | Greece | MSP | SOX17 | OS:1.60 (1.0–2.55) (F) | 56 (20–111) | Methylation | Serum | BS | / |
| 7 | Yang QF14 | 40 | 33/7 | China | BGS | BCL6B | OS:1.86 (0.68–5.10) (K) | / | Hypermethylation | Plasma | BS | 1 |
| 8 | Zhi QL15 | 202 | 120/82 | China | MSP | XAF1 | DFS:5.71 (3.474–9.383) (K) | / | Methylation | Serum | BS | / |
| 9 | Han J16 | 92 | 53/39 | China | qMSP | MINT2 | DFS:3.362 (1.779–5.981) (D) | / | Methylation | Serum | BS | / |
| 10 | Wu YC | 92 | 53/39 | China | qMSP | P16 | DFS: 2.31 (1.00–5.37) (K) | / | Methylation | Serum | BS | / |
| 11 | Yu JL17 | 92 | 54/38 | China | MSP | TIMP-3 | DFS:97.376 (8.388–1130.378) (D) | / | Methylation | Serum | BS | / |
| 12 | Zhang H18 | 41 | 30/11 | China | MSP | Spastic paraplegia-20 | / | / | Hypermethylation | BS | 2 | |
| 13 | Chang L19 | 42 | 30/12 | China | MSP | SFRP1 | / | / | Methylation | Serum | BS | 5 |
| 14 | Ioanna B. (APC)20 | 73 | 51/22 | Greece | MSP | APC | OS: 2.94(1.33-6.53) (F) | 56 (12–111) | Methylation | Serum | BS | / |
| Ioanna B.(RASSF1A)20 | 73 | 51/22 | Greece | MSP | RASSF1A | OS: | 56 (12–111) | Methylation | Serum | BS | / | |
| 15 | Charinya P (PCDH10)21 | 101 | 44/57 | Tailand | MSP | PCDH10 | OS:3.47(1.69-7.11) (F) | / | Methylation | plasma | BS | / |
| Charinya P (RASSF1A) 21 | 101 | 44/57 | Thailand | MSP | RASSF1A | OS:1.66(0.98-2.83) (F) | / | Methylation | plasma | BS | / | |
| 16 | Li WH22 | 48 (25) | 39/9 | China | MSP | OSR2:VAV3:PPFIA3 | / | / | Methylation | Serum | BS | 0.4 |
K: extracted and calculated from the Kaplan-Meier curves in the studies; F: calculated by the formula provided by Parmar et al37. D: directly extracted by the authors in the studies; HR: hazard ratio; AT: alteration type; SS: sample source; ST: sample time; BV: blood volume; MSP: methylation-specific PCR; qMSP: quantitative methylation-specific PCR; BS: before surgery; TOS: time of surgery; OS: overall survival; DFS: disease-free survival.
Figure 2Summarized genetic alterations arranged by main gene function
Figure 3Diagnosis quality assessments of included studies using the QUADAS-2 tool criteria
Figure 4Diagnostic accuracy forest plots
(A) Forest plots of overall sensitivity. (B) Forest plots of overall specificity. (C) Forest plots of positive likelihood ratio. (D) Forest plots of negative likelihood ratio.
Subgroup analysis of diagnosis measures
| Subgroup | Sensitivity | Specificity | Diagnostic ratios | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Value | Value | Value | |||||||
| Method | |||||||||
| MSP | 0.66 (0.63–0.69) | 93.3 | 0.000 | 0.96 (0.95–0.97) | 70.6 | 0.0001 | 58.16 (23.44–144.29) | 69.3 | 0.0001 |
| qPCR | 0.46 (0.39–0.52) | 98.4 | 0.000 | 0.85 (0.79–0.90) | 94.5 | 0.000 | 21.82 (9.38–50.76) | 0.0 | 0.413 |
| Race | |||||||||
| Mongolian | 0.62 (0.59–0.65) | 96.0 | 0.000 | 0.94 (0.92–0.95) | 86.9 | 0.000 | 39.82 (17.02–93.15) | 72.5 | 0.000 |
| Caucasian | 0.62 (0.56–0.68) | 93.2 | 0.000 | 1.00 (0.97–1.00) | 0.0 | 1.000 | 79.01 (18.97–328.98) | 0.0 | 0.870 |
| Size | |||||||||
| < 65 | 0.46 (0.41–0.52) | 86.9 | 0.000 | 0.96 (0.93–0.98) | 61.4 | 0.017 | 15.43 (7.89–30.19) | 0.0 | 0.431 |
| ≥ 65 | 0.67 (0.64–0.70) | 96.4 | 0.000 | 0.94 (0.92–0.96) | 89.8 | 0.000 | 80.92 (32.86–199.28) | 61.3 | 0.006 |
| Gene target | |||||||||
| Single | 0.68 (0.58–0.76) | 90.2 | 0.001 | 0.87 (0.74–0.95) | 0.0 | 0.867 | 16.45 (3.57–75.79) | 59.6 | 0.116 |
| Combined | 0.61 (0.59–0.64) | 95.8 | 0.000 | 0.95 (0.93–0.96) | 86.1 | 0.000 | 53.31 (24.26–117.13) | 61.8 | 0.0008 |
I2 = inconsistency index; MSP = methylation-specific PCR; qMSP = quantitative methylation-specific PCR.
Meta-regression results of diagnostic value
| Parameter | Sensitivity | Specificity | ||||
|---|---|---|---|---|---|---|
| Coef | Z | Coef | Z | |||
| Method | –0.03 | –0.70 | 0.49 | 3.65 | –0.21 | 0.83 |
| Race | 0.44 | –0.04 | 0.97 | 30.10 | 0.00 | 1.00 |
| Size | 1.21 | 0.88 | 0.38 | 4.42 | 0.31 | 0.76 |
| Gene target | 2.07 | 2.37 | 0.02 | 2.74 | –1.09 | 0.27 |
Meta-analysis results of prognostic significance
Figure 6Forest plot of the HRs for survival in ctDNA detection of GC patients
(A) Association with overall survival; (B) Association with disease free survival.
Figure 7Heterogeneity exploration in DFS analysis
(A) Galbraith blot of association between ctDNA and disease free survival; (B) Forest plot of HRs for disease free survival after omission of Yu JL's study.
Meta-analysis of the association between ctDNA presence and clinicopathological features of GC patients
| Stratification | No. of studies | No. of patients | Pooled OR | 95% CI of pooled OR | Heterogeneity | ||
|---|---|---|---|---|---|---|---|
| I2 (%) | |||||||
| SEX (M/F) | 12 | 876 | 0.97 | 0.72-1.31 | 0.849 | 0 | 0.763 |
| pT (I + II/III + IV) | 8 | 545 | 0.18 | 0.07-0.45 | 0.001 | 79.6 | 0.000 |
| Lymph node metastasis (N0/N1-3) | 7 | 744 | 0.19 | 0.06-0.64 | 0.008 | 90.2 | 0.000 |
| Distant metastasis (M0/M1) | 7 | 606 | 0.32 | 0.20-0.53 | 0..000 | 41.5 | 0.072 |
| TNM stage(I + II/III + IV) a | 6 | 561 | 0.11 | 0.07-0.17 | 0.000 | 90.4 | 0.000 |
| Tumor size (< 5 cm/< 5 cm) | 4 | 665 | 0.26 | 0.11-0.61 | 0.002 | 79.9 | 0.002 |
| Lauren's classification (Intestinal/Diffuse) | 2 | 317 | 0.89 | 0.57-1.4 | 0.628 | 0.000 | 0.808 |
| H. pylori infection (Negative/positive) | 3 | 386 | 0.57 | 0.36-0.91 | 0.018 | 10.2 | 0.328 |
a: All the enrolled studies applied AJCC/UICC 7th TNM staging system, except Wang YC's and Chouhei S’ studies using the 6th edition. OR: odds ratio; I2: inconsistency index; MSP: methylation-specific PCR; qMSP: quantitative methylation-specific PCR; H. pylori: Helicobacter pylori.
Figure 8Funnel plot for the evaluation of potential publication bias in the impact of ctDNA on overall survival of GC patients
(A) Begg's funnel plot; (B) Egger's funnel plot.
Figure 5Summary receiver operating characteristic plot for the included studies with the associated 95% confidence region