Literature DB >> 28009170

Modulation of Molecular Flux Using a Graphene Nanopore Capacitor.

Manish Shankla1, Aleksei Aksimentiev.   

Abstract

Modulation of ionic current flowing through nanoscale pores is one of the fundamental biological processes. Inspired by nature, nanopores in synthetic solid-state membranes are being developed to enable rapid analysis of biological macromolecules and to serve as elements of nanofludic circuits. Here, we theoretically investigate ion and water transport through a graphene-insulator-graphene membrane containing a single, electrolyte-filled nanopore. By means of all-atom molecular dynamics simulations, we show that the charge state of such a graphene nanopore capacitor can regulate both the selectivity and the magnitude of the nanopore ionic current. At a fixed transmembrane bias, the ionic current can be switched from being carried by an equal mixture of cations and anions to being carried almost exclusively by either cationic or anionic species, depending on the sign of the charge assigned to both plates of the capacitor. Assigning the plates of the capacitor opposite sign charges can either increase the nanopore current or reduce it substantially, depending on the polarity of the bias driving the transmembrane current. Facilitated by the changes of the nanopore surface charge, such ionic current modulations are found to occur despite the physical dimensions of the nanopore being an order of magnitude larger than the screening length of the electrolyte. The ionic current rectification is accompanied by a pronounced electro-osmotic effect that can transport neutral molecules such as proteins and drugs across the solid-state membrane and thereby serve as an interface between electronic and chemical signals.

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Year:  2017        PMID: 28009170      PMCID: PMC5523142          DOI: 10.1021/acs.jpcb.6b10574

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  70 in total

1.  Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics.

Authors:  P S Crozier; D Henderson; R L Rowley; D D Busath
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

3.  Charge- and size-based separation of macromolecules using ultrathin silicon membranes.

Authors:  Christopher C Striemer; Thomas R Gaborski; James L McGrath; Philippe M Fauchet
Journal:  Nature       Date:  2007-02-15       Impact factor: 49.962

4.  Effect of salt concentration on the electrophoretic speed of a polyelectrolyte through a nanopore.

Authors:  Sandip Ghosal
Journal:  Phys Rev Lett       Date:  2007-06-07       Impact factor: 9.161

5.  Concentration polarization and nonlinear electrokinetic flow near a nanofluidic channel.

Authors:  Sung Jae Kim; Ying-Chih Wang; Jeong Hoon Lee; Hongchul Jang; Jongyoon Han
Journal:  Phys Rev Lett       Date:  2007-07-25       Impact factor: 9.161

6.  Noise in solid-state nanopores.

Authors:  R M M Smeets; U F Keyser; N H Dekker; C Dekker
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-09       Impact factor: 11.205

Review 7.  Membrane transporters in drug development.

Authors:  Kathleen M Giacomini; Shiew-Mei Huang; Donald J Tweedie; Leslie Z Benet; Kim L R Brouwer; Xiaoyan Chu; Amber Dahlin; Raymond Evers; Volker Fischer; Kathleen M Hillgren; Keith A Hoffmaster; Toshihisa Ishikawa; Dietrich Keppler; Richard B Kim; Caroline A Lee; Mikko Niemi; Joseph W Polli; Yuichi Sugiyama; Peter W Swaan; Joseph A Ware; Stephen H Wright; Sook Wah Yee; Maciej J Zamek-Gliszczynski; Lei Zhang
Journal:  Nat Rev Drug Discov       Date:  2010-03       Impact factor: 84.694

Review 8.  Modeling and simulation of ion channels.

Authors:  Christopher Maffeo; Swati Bhattacharya; Jejoong Yoo; David Wells; Aleksei Aksimentiev
Journal:  Chem Rev       Date:  2012-10-04       Impact factor: 60.622

9.  Ion selection of charge-modified large nanopores in a graphene sheet.

Authors:  Shijun Zhao; Jianming Xue; Wei Kang
Journal:  J Chem Phys       Date:  2013-09-21       Impact factor: 3.488

10.  Electrochemistry at the edge of a single graphene layer in a nanopore.

Authors:  Shouvik Banerjee; Jiwook Shim; Jose Rivera; Xiaozhong Jin; David Estrada; Vita Solovyeva; Xueqiu You; James Pak; Eric Pop; Narayana Aluru; Rashid Bashir
Journal:  ACS Nano       Date:  2012-12-28       Impact factor: 15.881

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  4 in total

1.  SDS-assisted protein transport through solid-state nanopores.

Authors:  Laura Restrepo-Pérez; Shalini John; Aleksei Aksimentiev; Chirlmin Joo; Cees Dekker
Journal:  Nanoscale       Date:  2017-08-17       Impact factor: 7.790

2.  Electro-Mechanical Conductance Modulation of a Nanopore Using a Removable Gate.

Authors:  Shidi Zhao; Laura Restrepo-Pérez; Misha Soskine; Giovanni Maglia; Chirlmin Joo; Cees Dekker; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2019-02-08       Impact factor: 15.881

3.  Nanoscale Ion Pump Derived from a Biological Water Channel.

Authors:  Karl Decker; Martin Page; Aleksei Aksimentiev
Journal:  J Phys Chem B       Date:  2017-08-09       Impact factor: 2.991

4.  Ionic Transport in Electrostatic Janus Membranes. An Explicit Solvent Molecular Dynamic Simulation.

Authors:  Joan M Montes de Oca; Johnson Dhanasekaran; Andrés Córdoba; Seth B Darling; Juan J de Pablo
Journal:  ACS Nano       Date:  2022-03-01       Impact factor: 15.881

  4 in total

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