| Literature DB >> 27929383 |
Rui-Xi Hua1,2, Zhen-Jian Zhuo3, Jinhong Zhu4, Dan-Hua Jiang5, Wen-Qiong Xue1, Shao-Dan Zhang1, Jiang-Bo Zhang1, Xi-Zhao Li1, Pei-Fen Zhang1, Wei-Hua Jia1, Guo-Ping Shen1,6, Jing He1,7.
Abstract
Xeroderma pigmentosum group G (XPG) recognizes and excises DNA damage on the 3' side during the DNA repair process. Previous studies indicated that XPG gene polymorphisms may associate with gastric cancer susceptibility, but results were inconsistent. We evaluated the association of five potentially functional XPG polymorphisms (rs2094258 C>T, rs751402 C>T, rs2296147 T>C, rs1047768 T>C, and rs873601 G>A) with gastric cancer susceptibility in 1142 gastric cancer cases and 1173 controls. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated using logistic regression models. Overall, no significant association was detected between any of selected polymorphism and gastric cancer risk. However, we found that individuals carrying 3-4 risk genotypes were at significantly higher risk of gastric cancer than those with 0-2 risk genotypes (OR=1.32, 95% CI=1.04-1.68, P=0.021). The stratification analysis revealed that the cumulative effect of risk genotypes (3-4 vs. 0-2) on gastric cancer were more prominent among subgroups older than 58 years and men. In conclusion, our results indicated that none of the selected XPG polymorphism could significantly alter gastric cancer susceptibility alone. These polymorphisms might collectively confer increased gastric cancer susceptibility. These findings would be strengthened by larger prospective multicenter studies involving different ethnic populations.Entities:
Keywords: XPG; gastric cancer; genetic susceptibility; polymorphism
Mesh:
Substances:
Year: 2016 PMID: 27929383 PMCID: PMC5270670 DOI: 10.18632/aging.101119
Source DB: PubMed Journal: Aging (Albany NY) ISSN: 1945-4589 Impact factor: 5.682
Logistic regression analysis of associations between XPG and gastric cancer risk
| Genotypes | Cases | Controls | Crude OR | Adjusted OR | |||
|---|---|---|---|---|---|---|---|
| rs2094258 | |||||||
| CC | 499 (43.70) | 527 (44.93) | 1.00 | 1.00 | |||
| CT | 508 (44.48) | 524 (44.67) | 1.02 (0.86-1.22) | 0.789 | 0.99 (0.82-1.21) | 0.938 | |
| TT | 135 (11.82) | 122 (10.40) | 1.17 (0.89-1.54) | 0.265 | 1.17 (0.86-1.59) | 0.329 | |
| Dominant | 643 (56.30) | 646 (55.07) | 0.551 | 1.05 (0.89-1.24) | 0.551 | 1.03 (0.85-1.24) | 0.794 |
| Additive model | 0.534 | 1.06 (0.94-1.20) | 0.338 | 1.05 (0.91-1.21) | 0.488 | ||
| Recessive | 1007 (88.18) | 1051 (89.60) | 0.277 | 1.16 (0.89-1.50) | 0.277 | 1.17 (0.87-1.57) | 0.291 |
| rs751402 | |||||||
| CC | 426 (37.30) | 433 (36.91) | 1.00 | 1.00 | |||
| CT | 555 (48.60) | 551 (46.97) | 1.02 (0.86-1.22) | 0.796 | 1.09 (0.89-1.34) | 0.397 | |
| TT | 161 (14.10) | 189 (16.11) | 0.87 (0.68-1.11) | 0.258 | 0.87 (0.65-1.15) | 0.328 | |
| Dominant | 716 (62.70) | 740 (63.09) | 0.846 | 0.98 (0.83-1.16) | 0.846 | 1.03 (0.85-1.25) | 0.740 |
| Additive model | 0.387 | 0.95 (0.84-1.07) | 0.401 | 0.97 (0.84-1.10) | 0.606 | ||
| Recessive | 981 (85.90) | 984 (83.89) | 0.176 | 0.86 (0.68-1.07) | 0.177 | 0.83 (0.64-1.07) | 0.150 |
| rs2296147 | |||||||
| TT | 725 (63.49) | 746(63.60) | 1.00 | 1.00 | |||
| CT | 364 (31.87) | 388 (33.08) | 0.97 (0.81-1.15) | 0.694 | 0.98 (0.80-1.20) | 0.856 | |
| CC | 53 (4.64) | 39 (3.32) | 1.40 (0.91-2.14) | 0.123 | 1.28 (0.78-2.08) | 0.329 | |
| Dominant | 417 (36.51) | 427 (36.40) | 0.955 | 1.01 (0.85-1.19) | 0.955 | 1.01 (0.83-1.22) | 0.927 |
| Additive model | 0.249 | 1.05 (0.91-1.21) | 0.544 | 1.04 (0.88-1.22) | 0.672 | ||
| Recessive | 1089 (95.36) | 1134 (96.68) | 0.105 | 1.42 (0.93-2.16) | 0.107 | 1.28 (0.79-2.09) | 0.312 |
| rs1047768 | |||||||
| TT | 607 (53.15) | 625 (53.28) | 1.00 | 1.00 | |||
| TC | 445 (38.97) | 461 (39.30) | 0.99 (0.84-1.18) | 0.944 | 0.96 (0.79-1.17) | 0.706 | |
| CC | 90 (7.88) | 87 (7.42) | 1.07 (0.78-1.46) | 0.695 | 1.10 (0.77-1.58) | 0.591 | |
| Dominant | 535 (46.85) | 548 (46.72) | 0.950 | 1.01 (0.85-1.18) | 0.950 | 0.98 (0.82-1.19) | 0.869 |
| Additive model | 0.913 | 1.02 (0.89-1.15) | 0.822 | 1.01 (0.87-1.17) | 0.891 | ||
| Recessive | 1052 (92.12) | 1086 (92.58) | 0.674 | 1.07 (0.79-1.45) | 0.675 | 1.12 (0.79-1.59) | 0.521 |
| rs873601 | |||||||
| GG | 311 (27.23) | 323 (27.54) | 1.00 | 1.00 | |||
| AG | 557 (48.77) | 598 (50.98) | 0.97 (0.80-1.17) | 0.738 | 0.97 (0.78-1.21) | 0.796 | |
| AA | 274 (23.99) | 252 (21.48) | 1.13 (0.90-1.42) | 0.303 | 1.11 (0.85-1.44) | 0.448 | |
| Dominant | 831 (72.77) | 850 (72.46) | 0.870 | 1.02 (0.85-1.22) | 0.870 | 1.01 (0.82-1.25) | 0.909 |
| Additive model | 0.335 | 1.06 (0.94-1.19) | 0.338 | 1.05 (0.92-1.20) | 0.480 | ||
| Recessive | 868 (76.01) | 921 (78.52) | 0.150 | 1.15 (0.95-1.40) | 0.150 | 1.13 (0.91-1.41) | 0.286 |
| Risk genotypes | |||||||
| 0 | 158 (13.84) | 184 (15.69) | 0.185 | 1.00 | 1.00 | ||
| 1 | 613 (53.68) | 638 (54.39) | 1.12 (0.88-1.42) | 0.358 | 1.16 (0.88-1.52) | 0.295 | |
| 2 | 194 (16.99) | 208 (17.73) | 1.09 (0.81-1.45) | 0.575 | 1.13 (0.81-1.57) | 0.471 | |
| 3 | 176 (15.41) | 142 (12.11) | |||||
| 4 | 1 (0.09) | 1 (0.09) | 1.17 (0.07-18.77) | 0.915 | 2.61 (0.06-107.90) | 0.614 | |
| 0-2 | 965 (84.50) | 1030 (87.81) | 1.00 | 1.00 | |||
| 3-4 | 177 (15.50) | 143 (12.19) | 0.021 | 1.29 (0.99-1.69) | 0.062 | ||
CI, confidence interval; OR, odds ratio.
Chi square test for genotype distributions between cases and controls.
Adjusted for age, gender, pack-years, smoking and drinking status in logistic regress models.
Stratification analysis for associations between the three XPG variant genotypes and gastric cancer risk in Chinese population
| Variables | rs751402 | Adjusted OR | rs873601 | Adjusted OR | Risk genotype | Adjusted OR | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC/CT | TT | GG/AG | AA | 0-2 | 3-4 | |||||||
| Median age, yr | ||||||||||||
| ≤58 | 508/850 | 90/166 | 0.89 (0.67-1.20) | 0.454 | 448/796 | 150/220 | 1.19 (0.93-1.53) | 0.163 | 511/888 | 87/128 | 1.14 (0.84-1.55) | 0.407 |
| >58 | 473/134 | 71/23 | 0.82 (0.49-1.36) | 0.436 | 420/125 | 124/32 | 1.12 (0.72-1.75) | 0.604 | 454/142 | 90/15 | ||
| Gender | ||||||||||||
| Males | 637/655 | 112/134 | 0.84 (0.61-1.15) | 0.264 | 567/625 | 182/164 | 1.17 (0.89-1.55) | 0.267 | 629/695 | 120/94 | ||
| Females | 344/329 | 49/55 | 0.83 (0.53-1.31) | 0.431 | 301/296 | 92/88 | 1.07 (0.74-1.55) | 0.708 | 336/335 | 57/49 | 0.98 (0.63-1.54) | 0.940 |
| Smoking status | ||||||||||||
| Never | 633/559 | 102/103 | 0.77 (0.55-1.08) | 0.131 | 555/521 | 180/141 | 1.27 (0.94-1.68) | 0.123 | 616/582 | 119/80 | 1.28 (0.90-1.82) | 0.167 |
| Ever | 348/425 | 59/86 | 0.89 (0.60-1.34) | 0.590 | 313/400 | 94/111 | 0.98 (0.68-1.40) | 0.896 | 349/448 | 58/63 | 1.24 (0.80-1.92) | 0.330 |
| Pack-year | ||||||||||||
| 0 | 633/559 | 102/103 | 0.77 (0.55-1.08) | 0.131 | 555/521 | 180/141 | 1.27 (0.94-1.68) | 0.123 | 616/582 | 119/80 | 1.28 (0.90-1.82) | 0.167 |
| ≤ 30 | 231/322 | 41/61 | 1.04 (0.63-1.71) | 0.891 | 211/295 | 61/88 | 0.93 (0.60-1.44) | 0.750 | 232/331 | 40/52 | 1.04 (0.62-1.75) | 0.894 |
| > 30 | 117/103 | 18/25 | 0.70 (0.35-1.41) | 0.313 | 102/105 | 33/23 | 1.06 (0.56-2.03) | 0.857 | 117/117 | 18/11 | 1.73 (0.73-4.09) | 0.211 |
| Drinking status | ||||||||||||
| Never | 795/499 | 139/101 | 0.84 (0.62-1.13) | 0.237 | 708/470 | 226/130 | 1.16 (0.89-1.50) | 0.280 | 790/522 | 144/78 | 1.17 (0.85-1.61) | 0.326 |
| Ever | 186/485 | 22/88 | 0.77 (0.44-1.35) | 0.357 | 160/451 | 48/122 | 1.11 (0.71-1.74) | 0.659 | 175/508 | 33/65 | 1.46 (0.85-2.50) | 0.169 |
| Tumor site | ||||||||||||
| Cardia | 205/984 | 35/189 | 0.88 (0.57-1.36) | 0.554 | 185/921 | 55/252 | 1.14 (0.78-1.66) | 0.500 | 205/1030 | 35/143 | 1.39 (0.88-2.18) | 0.156 |
| Non-cardia | 776/984 | 126/189 | 0.81 (0.62-1.07) | 0.141 | 683/921 | 219/252 | 1.14 (0.90-1.43) | 0.279 | 760/1030 | 142/143 | 1.31 (0.99-1.74) | 0.059 |
| Duke stage | ||||||||||||
| I/II | 405/984 | 64/189 | 0.75 (0.53-1.06) | 0.106 | 360/921 | 109/252 | 1.13 (0.85-1.51) | 0.407 | 397/1030 | 72/143 | 1.31 (0.92-1.86) | 0.130 |
| III/IV | 576/984 | 97/189 | 0.88 (0.65-1.18) | 0.397 | 508/921 | 165/252 | 1.16 (0.90-1.48) | 0.261 | 568/1030 | 105/143 | 1.33 (0.98-1.81) | 0.066 |
CI, confidence interval; OR, odds ratio.
Obtained in logistic regression models with adjustment for age, gender, pack-years, smoking and drinking status with omitting the corresponding stratification factor.
The frequency of inferred haplotypes of XPG gene based on observed genotypes and their association with the risk of gastric cancer
| Haplotypes | Cases (n=2284) | Controls (n=2346) | Crude OR (95% CI) | Adjusted OR | ||
|---|---|---|---|---|---|---|
| CTTTG | 747 (32.71) | 802 (34.19) | 1.00 | 1.00 | ||
| CTTTA | 123 (5.39) | 122 (5.20) | 1.08 (0.83-1.42) | 0.565 | 1.06 (0.78-1.44) | 0.694 |
| CTTCG | 4 (0.18) | 5 (0.21) | 0.86 (0.23-3.21) | 0.821 | 0.64 (0.15-2.75) | 0.547 |
| CTTCA | 1 (0.04) | 0 | / | 0.978 | / | 0.981 |
| CTCTA | 1 (0.04) | 0 | / | 0.978 | / | 0.980 |
| CCTTG | 140 (6.13) | 150 (6.39) | 1.00 (0.78-1.29) | 0.987 | 0.92 (0.70-1.23) | 0.584 |
| CCTTA | 67 (2.93) | 80 (3.41) | 0.90 (0.64-1.26) | 0.540 | 0.80 (0.54-1.18) | 0.253 |
| CCTCG | 31 (1.36) | 48 (2.05) | 0.69 (0.44-1.10) | 0.121 | 0.82 (0.49-1.40) | 0.468 |
| CCTCA | 73 (3.20) | 66 (2.81) | 1.19 (0.84-1.68) | 0.332 | 1.17 (0.79-1.72) | 0.443 |
| CCCTG | 5 (0.22) | 8 (0.34) | 0.67 (0.22-2.06) | 0.486 | 0.76 (0.21-2.76) | 0.679 |
| CCCTA | 2 (0.09) | 2 (0.09) | 1.07 (0.15-7.64) | 0.943 | 1.58 (0.19-13.31) | 0.674 |
| CCCCG | 194 (8.49) | 177 (7.54) | 1.18 (0.94-1.48) | 0.160 | 1.14 (0.88-1.47) | 0.330 |
| CCCCA | 118 (5.17) | 118 (5.03) | 1.07 (0.82-1.41) | 0.611 | 1.16 (0.85-1.58) | 0.358 |
| TTTTG | 1 (0.04) | 0 | / | 0.978 | / | 0.976 |
| TCTTG | 40 (1.75) | 43 (1.83) | 1.00 (0.64-1.55) | 0.996 | 1.02 (0.62-1.68) | 0.925 |
| TCTTA | 528 (23.12) | 498 (21.23) | 1.14 (0.97-1.33) | 0.108 | 1.13 (0.95-1.36) | 0.169 |
| TCTCG | 6 (0.26) | 2 (0.09) | 3.22 (0.65-16.01) | 0.153 | 2.10 (0.40-11.05) | 0.383 |
| TCTCA | 53 (2.32) | 64 (2.73) | 0.89 (0.61-1.30) | 0.542 | 0.87 (0.57-1.34) | 0.538 |
| TCCTA | 5 (0.22) | 6 (0.26) | 0.90 (0.27-2.94) | 0.855 | 1.07 (0.30-3.83) | 0.918 |
| TCCCG | 11 (0.48) | 9 (0.38) | 1.31 (0.54-3.18) | 0.548 | 1.41 (0.51-3.91) | 0.504 |
| TCCCA | 134 (5.87) | 146 (6.22) | 0.99 (0.76-1.27) | 0.910 | 0.89 (0.66-1.18) | 0.411 |
The haplotypes order were rs2094258, rs751402, rs2296147, rs1047768, and rs873601.
Obtained in logistic regression models with adjustment for age, gender, pack‐years, smoking and drinking status.