Literature DB >> 27911801

Mechanical bounds to transcriptional noise.

Stuart A Sevier1,2, David A Kessler3, Herbert Levine1,2,4.   

Abstract

Over the past several decades it has been increasingly recognized that stochastic processes play a central role in transcription. Although many stochastic effects have been explained, the source of transcriptional bursting (one of the most well-known sources of stochasticity) has continued to evade understanding. Recent results have pointed to mechanical feedback as the source of transcriptional bursting, but a reconciliation of this perspective with preexisting views of transcriptional regulation is lacking. In this article, we present a simple phenomenological model that is able to incorporate the traditional view of gene expression within a framework with mechanical limits to transcription. By introducing a simple competition between mechanical arrest and relaxation copy number probability distributions collapse onto a shared universal curve under shifting and rescaling and a lower limit of intrinsic noise for any mean expression level is found.

Keywords:  bursting noise; supercoiling; topoisomerase; transcription

Mesh:

Substances:

Year:  2016        PMID: 27911801      PMCID: PMC5150389          DOI: 10.1073/pnas.1612651113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

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