Literature DB >> 23003996

Universal protein fluctuations in populations of microorganisms.

Hanna Salman1, Naama Brenner, Chih-kuan Tung, Noa Elyahu, Elad Stolovicki, Lindsay Moore, Albert Libchaber, Erez Braun.   

Abstract

The copy number of any protein fluctuates among cells in a population; characterizing and understanding these fluctuations is a fundamental problem in biophysics. We show here that protein distributions measured under a broad range of biological realizations collapse to a single non-gaussian curve under scaling by the first two moments. Moreover, in all experiments the variance is found to depend quadratically on the mean, showing that a single degree of freedom determines the entire distribution. Our results imply that protein fluctuations do not reflect any specific molecular or cellular mechanism, and suggest that some buffering process masks these details and induces universality.

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Year:  2012        PMID: 23003996     DOI: 10.1103/PhysRevLett.108.238105

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  24 in total

1.  Single-cell protein dynamics reproduce universal fluctuations in cell populations.

Authors:  Naama Brenner; Erez Braun; Anna Yoney; Lee Susman; James Rotella; Hanna Salman
Journal:  Eur Phys J E Soft Matter       Date:  2015-09-28       Impact factor: 1.890

2.  Cell-cell contacts confine public goods diffusion inside Pseudomonas aeruginosa clonal microcolonies.

Authors:  Thomas Julou; Thierry Mora; Laurent Guillon; Vincent Croquette; Isabelle J Schalk; David Bensimon; Nicolas Desprat
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-15       Impact factor: 11.205

3.  Cell responses only partially shape cell-to-cell variations in protein abundances in Escherichia coli chemotaxis.

Authors:  Sayak Mukherjee; Sang-Cheol Seok; Veronica J Vieland; Jayajit Das
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

4.  Mechanical bounds to transcriptional noise.

Authors:  Stuart A Sevier; David A Kessler; Herbert Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-22       Impact factor: 11.205

5.  Statistical thermodynamics of transcription profiles in normal development and tumorigeneses in cohorts of patients.

Authors:  F Remacle; R D Levine
Journal:  Eur Biophys J       Date:  2015-08-20       Impact factor: 1.733

6.  Synaptic size dynamics as an effectively stochastic process.

Authors:  Adiel Statman; Maya Kaufman; Amir Minerbi; Noam E Ziv; Naama Brenner
Journal:  PLoS Comput Biol       Date:  2014-10-02       Impact factor: 4.475

Review 7.  Genetic determinants and cellular constraints in noisy gene expression.

Authors:  Alvaro Sanchez; Ido Golding
Journal:  Science       Date:  2013-12-06       Impact factor: 47.728

8.  Promoter architecture dictates cell-to-cell variability in gene expression.

Authors:  Daniel L Jones; Robert C Brewster; Rob Phillips
Journal:  Science       Date:  2014-12-18       Impact factor: 47.728

9.  Metabolic variability in micro-populations.

Authors:  Yuval Elhanati; Naama Brenner
Journal:  PLoS One       Date:  2012-12-27       Impact factor: 3.240

10.  Effects of post-transcriptional regulation on phenotypic noise in Escherichia coli.

Authors:  Rinat Arbel-Goren; Asaf Tal; Tamar Friedlander; Shiri Meshner; Nina Costantino; Donald L Court; Joel Stavans
Journal:  Nucleic Acids Res       Date:  2013-03-21       Impact factor: 16.971

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