Literature DB >> 27892769

CircRNAs in the brain.

Mor Hanan1, Hermona Soreq1,2, Sebastian Kadener1.   

Abstract

Circular RNAs (circRNAs) are highly abundant and evolutionarily conserved non-coding RNAs produced by circularization of specific exons. Since their re-discovery as potential regulators of gene expression, thousands of circRNAs were detected in different tissues and cell types across most organisms. Accumulating data suggest key roles for them in the central nervous system. Neuronal-expressed RNAs are diverted to yield highly enriched CircRNAs in human, mouse, pig and flies, with many of them enriched in neuronal tissues. CircRNA levels are dynamically modulated in neurons, both during differentiation and following bursts of electrical activity, and accumulate with age, and many of them are enriched in synapses. Together, available data suggest that circRNAs have important roles in synaptic plasticity and neuronal function. This review covers current advances in the field and lays out hypotheses regarding functions of circRNAs in the brain as well as their putative involvement in initiation and progression of neurodegenerative processes.

Entities:  

Keywords:  Brain; circRNA; development; neurodegeneration; neuronal-function; synapse

Mesh:

Substances:

Year:  2016        PMID: 27892769      PMCID: PMC5680707          DOI: 10.1080/15476286.2016.1255398

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  49 in total

Review 1.  Local RNA translation at the synapse and in disease.

Authors:  Liqun Liu-Yesucevitz; Gary J Bassell; Aaron D Gitler; Anne C Hart; Eric Klann; Joel D Richter; Stephen T Warren; Benjamin Wolozin
Journal:  J Neurosci       Date:  2011-11-09       Impact factor: 6.167

Review 2.  Neuronal regulation of alternative pre-mRNA splicing.

Authors:  Qin Li; Ji-Ann Lee; Douglas L Black
Journal:  Nat Rev Neurosci       Date:  2007-11       Impact factor: 34.870

Review 3.  Pre-mRNA processing reaches back to transcription and ahead to translation.

Authors:  Melissa J Moore; Nick J Proudfoot
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

Review 4.  Circular RNA and miR-7 in cancer.

Authors:  Thomas B Hansen; Jørgen Kjems; Christian K Damgaard
Journal:  Cancer Res       Date:  2013-09-06       Impact factor: 12.701

5.  Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.

Authors:  Agnieszka Rybak-Wolf; Christin Stottmeister; Petar Glažar; Marvin Jens; Natalia Pino; Sebastian Giusti; Mor Hanan; Mikaela Behm; Osnat Bartok; Reut Ashwal-Fluss; Margareta Herzog; Luisa Schreyer; Panagiotis Papavasileiou; Andranik Ivanov; Marie Öhman; Damian Refojo; Sebastian Kadener; Nikolaus Rajewsky
Journal:  Mol Cell       Date:  2015-04-23       Impact factor: 17.970

6.  Detecting and characterizing circular RNAs.

Authors:  William R Jeck; Norman E Sharpless
Journal:  Nat Biotechnol       Date:  2014-05       Impact factor: 54.908

7.  Circular RNAs are a large class of animal RNAs with regulatory potency.

Authors:  Sebastian Memczak; Marvin Jens; Antigoni Elefsinioti; Francesca Torti; Janna Krueger; Agnieszka Rybak; Luisa Maier; Sebastian D Mackowiak; Lea H Gregersen; Mathias Munschauer; Alexander Loewer; Ulrike Ziebold; Markus Landthaler; Christine Kocks; Ferdinand le Noble; Nikolaus Rajewsky
Journal:  Nature       Date:  2013-02-27       Impact factor: 49.962

Review 8.  Long noncoding RNAs: Central to nervous system development.

Authors:  Ronald P Hart; Loyal A Goff
Journal:  Int J Dev Neurosci       Date:  2016-06-11       Impact factor: 2.457

9.  Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.

Authors:  Qiupeng Zheng; Chunyang Bao; Weijie Guo; Shuyi Li; Jie Chen; Bing Chen; Yanting Luo; Dongbin Lyu; Yan Li; Guohai Shi; Linhui Liang; Jianren Gu; Xianghuo He; Shenglin Huang
Journal:  Nat Commun       Date:  2016-04-06       Impact factor: 14.919

10.  Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins.

Authors:  Marianne C Kramer; Dongming Liang; Deirdre C Tatomer; Beth Gold; Zachary M March; Sara Cherry; Jeremy E Wilusz
Journal:  Genes Dev       Date:  2015-10-08       Impact factor: 11.361

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  54 in total

1.  Overexpression of circARF3 mitigates TNF-α-induced inflammatory damage by up-regulating miR-125b.

Authors:  Yingying Zhang; Binghui Hou; Chunxiao Li; Hong Li
Journal:  Cell Cycle       Date:  2020-04-24       Impact factor: 4.534

Review 2.  Past, present, and future of circRNAs.

Authors:  Ines Lucia Patop; Stas Wüst; Sebastian Kadener
Journal:  EMBO J       Date:  2019-07-25       Impact factor: 11.598

3.  Analysis of pig transcriptomes suggests a global regulation mechanism enabling temporary bursts of circular RNAs.

Authors:  Annie Robic; Thomas Faraut; Sarah Djebali; Rosemarie Weikard; Katia Feve; Sarah Maman; Christa Kuehn
Journal:  RNA Biol       Date:  2019-06-03       Impact factor: 4.652

Review 4.  Exploring the secrets of brain transcriptional regulation: developing methodologies, recent significant findings, and perspectives.

Authors:  Zhe Ding; Luyun Sun; Cen Yang; Aihua Liu; Fukai Bao
Journal:  Brain Struct Funct       Date:  2021-02-05       Impact factor: 3.270

Review 5.  CircRNAs: novel therapeutic targets in multiple myeloma.

Authors:  Xinyi Zhou; Juan Du
Journal:  Mol Biol Rep       Date:  2022-06-21       Impact factor: 2.316

6.  Knockdown of circ_0007290 alleviates oxygen-glucose deprivation-induced neuronal injury by regulating miR-496/PDCD4 axis.

Authors:  Fengjuan Wang; Jie Liu; Dan Wang; Yu Yao; Xuhua Jiao
Journal:  Metab Brain Dis       Date:  2022-01-15       Impact factor: 3.584

Review 7.  Overview of noncoding RNAs involved in the osteogenic differentiation of periodontal ligament stem cells.

Authors:  Wei Qiu; Bu-Ling Wu; Fu-Chun Fang
Journal:  World J Stem Cells       Date:  2020-04-26       Impact factor: 5.326

8.  Differential Expression of Hippocampal Circular RNAs in the BTBR Mouse Model for Autism Spectrum Disorder.

Authors:  Silvia Gasparini; Giorgia Del Vecchio; Silvia Gioiosa; Tiziano Flati; Tiziana Castrignano; Ivano Legnini; Valerio Licursi; Laura Ricceri; Maria Luisa Scattoni; Arianna Rinaldi; Carlo Presutti; Cecilia Mannironi
Journal:  Mol Neurobiol       Date:  2020-02-04       Impact factor: 5.590

Review 9.  Functions and mechanisms of circular RNAs in regulating stem cell differentiation.

Authors:  Zhengjun Lin; Xianzhe Tang; Jia Wan; Xianghong Zhang; Chunfeng Liu; Tang Liu
Journal:  RNA Biol       Date:  2021-04-26       Impact factor: 4.652

Review 10.  Using Drosophila to uncover molecular and physiological functions of circRNAs.

Authors:  Aishwarya Krishnamoorthy; Sebastian Kadener
Journal:  Methods       Date:  2021-04-24       Impact factor: 3.608

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