Literature DB >> 27888445

Squeezed helical elastica.

Lila Bouzar1,2, Martin Michael Müller3,4, Pierre Gosselin5, Igor M Kulić6, Hervé Mohrbach7,6.   

Abstract

We theoretically study the conformations of a helical semi-flexible filament confined to a flat surface. This squeezed helix exhibits a variety of unexpected shapes resembling circles, waves or spirals depending on the material parameters. We explore the conformation space in detail and show that the shapes can be understood as the mutual elastic interaction of conformational quasi-particles. Our theoretical results are potentially useful to determine the material parameters of such helical filaments in an experimental setting.

Keywords:  Living systems: Biological Matter

Year:  2016        PMID: 27888445     DOI: 10.1140/epje/i2016-16114-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  16 in total

1.  Straight and curved conformations of FtsZ are regulated by GTP hydrolysis.

Authors:  C Lu; M Reedy; H P Erickson
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

2.  Intermediate filaments in small configuration spaces.

Authors:  Bernd Nöding; Sarah Köster
Journal:  Phys Rev Lett       Date:  2012-02-22       Impact factor: 9.161

3.  Helices.

Authors:  Nadia Chouaieb; Alain Goriely; John H Maddocks
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

4.  DNA-nanotube-induced alignment of membrane proteins for NMR structure determination.

Authors:  Shawn M Douglas; James J Chou; William M Shih
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-02       Impact factor: 11.205

5.  Equation of state of looped DNA.

Authors:  Igor M Kulić; Hervé Mohrbach; Rochish Thaokar; Helmut Schiessel
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-01-16

6.  Tubulin bistability and polymorphic dynamics of microtubules.

Authors:  Hervé Mohrbach; Albert Johner; Igor M Kulić
Journal:  Phys Rev Lett       Date:  2010-12-28       Impact factor: 9.161

7.  Salmonella flagella: in vitro reconstruction and over-all shapes of flagellar filaments.

Authors:  S Asakura; G Eguchi; T Iino
Journal:  J Mol Biol       Date:  1966-04       Impact factor: 5.469

8.  Confinement of semiflexible polymers.

Authors:  Jemal Guven; Pablo Vázquez-Montejo
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-02-16

9.  Cooperative lattice dynamics and anomalous fluctuations of microtubules.

Authors:  Hervé Mohrbach; Albert Johner; Igor M Kulić
Journal:  Eur Biophys J       Date:  2011-12-16       Impact factor: 1.733

10.  Polymers confined between two parallel plane walls.

Authors:  Hsiao-Ping Hsu; Peter Grassberger
Journal:  J Chem Phys       Date:  2004-01-22       Impact factor: 3.488

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  1 in total

1.  Adsorption of a Helical Filament Subject to Thermal Fluctuations.

Authors:  M-K Chae; Y Kim; A Johner; N-K Lee
Journal:  Polymers (Basel)       Date:  2020-01-10       Impact factor: 4.329

  1 in total

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