Literature DB >> 22463576

Intermediate filaments in small configuration spaces.

Bernd Nöding1, Sarah Köster.   

Abstract

Intermediate filaments play a key role in cell mechanics. Apart from their great importance from a biomedical point of view, they also act as a very suitable micrometer-sized model system for semiflexible polymers. We perform a statistical analysis of the thermal fluctuations of individual filaments confined in microchannels. The small channel width and the resulting deflections at the walls give rise to a reduction of the configuration space by about 2 orders of magnitude. This circumstance enables us to precisely measure the intrinsic persistence length of vimentin intermediate filaments and to show that they behave as ideal wormlike chains; we observe that small fluctuations in perpendicular planes decouple. Furthermore, the inclusion of results for confined actin filaments demonstrates that the Odijk confinement regime is valid over at least 1 order of magnitude in persistence length.

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Year:  2012        PMID: 22463576     DOI: 10.1103/PhysRevLett.108.088101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  16 in total

1.  Mechanical heterogeneity favors fragmentation of strained actin filaments.

Authors:  Enrique M De La Cruz; Jean-Louis Martiel; Laurent Blanchoin
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

2.  Squeezed helical elastica.

Authors:  Lila Bouzar; Martin Michael Müller; Pierre Gosselin; Igor M Kulić; Hervé Mohrbach
Journal:  Eur Phys J E Soft Matter       Date:  2016-11-29       Impact factor: 1.890

3.  Optical detection of nanometric thermal fluctuations to measure the stiffness of rigid superparamagnetic microrods.

Authors:  Fabien Gerbal; Yuan Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-22       Impact factor: 11.205

4.  Errors in Energy Landscapes Measured with Particle Tracking.

Authors:  Michał J Bogdan; Thierry Savin
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

Review 5.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

6.  The filament forming reactions of vimentin tetramers studied in a serial-inlet microflow device by small angle x-ray scattering.

Authors:  Oliva Saldanha; Martha E Brennich; Manfred Burghammer; Harald Herrmann; Sarah Köster
Journal:  Biomicrofluidics       Date:  2016-03-16       Impact factor: 2.800

Review 7.  Intermediate filament mechanics in vitro and in the cell: from coiled coils to filaments, fibers and networks.

Authors:  Sarah Köster; David A Weitz; Robert D Goldman; Ueli Aebi; Harald Herrmann
Journal:  Curr Opin Cell Biol       Date:  2015-01-23       Impact factor: 8.382

8.  Vimentin networks at tunable ion-concentration in microfluidic drops.

Authors:  Christian Dammann; Bernd Nöding; Sarah Köster
Journal:  Biomicrofluidics       Date:  2012-04-18       Impact factor: 2.800

9.  Lateral association and elongation of vimentin intermediate filament proteins: A time-resolved light-scattering study.

Authors:  Carlos G Lopez; Oliva Saldanha; Klaus Huber; Sarah Köster
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-21       Impact factor: 11.205

10.  Evidence for the extended de Gennes regime of a semiflexible polymer in slit confinement.

Authors:  Guo Kang Cheong; Xiaolan Li; Kevin D Dorfman
Journal:  Phys Rev E       Date:  2018-02-08       Impact factor: 2.529

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