Literature DB >> 27866370

Perspective: revisiting the field dependence of TROSY sensitivity.

Koh Takeuchi1,2, Haribabu Arthanari3,4, Gerhard Wagner5.   

Abstract

The discovery of the TROSY effect (Pervushin et al. in Proc Natl Acad Sci USA 94:12366-12371, 1997) for reducing transverse relaxation and line sharpening through selecting pathways in which dipole-dipole and CSA Hamiltonians partially cancel each other had a tremendous impact on solution NMR studies of macromolecules. Together with the methyl TROSY (Tugarinov and Kay in J Biomol NMR 28:165-172, 2004) it enabled structural and functional studies of significantly larger systems. The optimal field strengths for TROSY have been estimated to be on spectrometers operating around 900 MHz (21.14 T) for the 1HN TROSY (Pervushin et al. in Proc Natl Acad Sci USA 94:12366-12371, 1997) while the aromatic 13C (13Caro) TROSY is posited to be optimal at around 600 MHz (14.09 T) (Pervushin et al. in J Am Chem Soc 120:6394-6400, 1998b; Pervushin in Q Rev Biophys 33:161-197, 2000). The initial rational was based on the consideration of where the quadratic B0 field dependences of the TROSY relaxation rates reach a minimum. For sensitivity consideration, however, it is interesting to estimate which field strengths yield the tallest peaks. Recent studies of 15N-detected TROSYs suggested that maximal peak heights are expected at 1.15 GHz (27.01 T) although the slowest relaxation rates or longest transverse relaxation times T2 are indeed expected around 900 MHz (21.14 T) (Takeuchi in J Biomol NMR 63:323-331, 2015; Takeuchi et al. in J Biomol NMR 64:143-151, 2016). This was based on the fact that the heights of Lorentzian lines are proportional to B o3/2 * T2 (Bo). Thus, multiplying the parabolic T2(Bo) dependence with the increasing function of B o3/2 shifts the maxima of peak-height field dependence from the T2 maximum at 900 MHz to higher fields. Moreover, besides shifting the peak height maximum for 15N TROSY, this analysis yields estimates for optimal peak heights for 1HN detected TROSY to 1.5 GHz, and to 900 MHz for 13C-detected 13CaroTROSY as is detailed below. To our knowledge, this aspect of field dependence of TROSY sensitivity has not been in the attention of the NMR community but may affect perspectives of NMR at ultra-high fields.

Entities:  

Keywords:  13C detection; 15N detection; Aromatic TROSY; CSA; Field dependence; Sensitivity; TROSY

Mesh:

Year:  2016        PMID: 27866370      PMCID: PMC5218892          DOI: 10.1007/s10858-016-0075-4

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  23 in total

1.  Transverse-relaxation-optimized (TROSY) gradient-enhanced triple-resonance NMR spectroscopy.

Authors:  J P Loria; M Rance; A G Palmer
Journal:  J Magn Reson       Date:  1999-11       Impact factor: 2.229

Review 2.  Impact of transverse relaxation optimized spectroscopy (TROSY) on NMR as a technique in structural biology.

Authors:  K Pervushin
Journal:  Q Rev Biophys       Date:  2000-05       Impact factor: 5.318

3.  An isotope labeling strategy for methyl TROSY spectroscopy.

Authors:  Vitali Tugarinov; Lewis E Kay
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

4.  Deuteration in protein proton magnetic resonance.

Authors:  D M LeMaster
Journal:  Methods Enzymol       Date:  1989       Impact factor: 1.600

5.  Assignment of aliphatic side-chain 1HN/15N resonances in perdeuterated proteins.

Authors:  B T Farmer; R A Venters
Journal:  J Biomol NMR       Date:  1996-01       Impact factor: 2.835

6.  Effect of deuteration on the amide proton relaxation rates in proteins. Heteronuclear NMR experiments on villin 14T.

Authors:  M A Markus; K T Dayie; P Matsudaira; G Wagner
Journal:  J Magn Reson B       Date:  1994-10

7.  Single Transition-to-single Transition Polarization Transfer (ST2-PT) in [15N,1H]-TROSY.

Authors:  K V Pervushin; G Wider; K Wüthrich
Journal:  J Biomol NMR       Date:  1998-08       Impact factor: 2.835

8.  Solution NMR techniques for large molecular and supramolecular structures.

Authors:  Roland Riek; Jocelyne Fiaux; Eric B Bertelsen; Arthur L Horwich; Kurt Wuthrich
Journal:  J Am Chem Soc       Date:  2002-10-16       Impact factor: 15.419

9.  Nitrogen-detected CAN and CON experiments as alternative experiments for main chain NMR resonance assignments.

Authors:  Koh Takeuchi; Gregory Heffron; Zhen-Yu J Sun; Dominique P Frueh; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2010-06-17       Impact factor: 2.835

10.  Cross-correlated relaxation enhanced 1H[bond]13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes.

Authors:  Vitali Tugarinov; Peter M Hwang; Jason E Ollerenshaw; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2003-08-27       Impact factor: 15.419

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Authors:  Marco Schiavina; Maria Grazia Murrali; Letizia Pontoriero; Valerio Sainati; Rainer Kümmerle; Wolfgang Bermel; Roberta Pierattelli; Isabella C Felli
Journal:  Biophys J       Date:  2019-05-23       Impact factor: 4.033

2.  Evaluation of 15N-detected H-N correlation experiments on increasingly large RNAs.

Authors:  Robbin Schnieders; Christian Richter; Sven Warhaut; Vanessa de Jesus; Sara Keyhani; Elke Duchardt-Ferner; Heiko Keller; Jens Wöhnert; Lars T Kuhn; Alexander L Breeze; Wolfgang Bermel; Harald Schwalbe; Boris Fürtig
Journal:  J Biomol NMR       Date:  2017-09-06       Impact factor: 2.835

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Authors:  Robbins Puthenveetil; Olga Vinogradova
Journal:  J Biol Chem       Date:  2019-09-24       Impact factor: 5.157

4.  15N-Detected TROSY NMR experiments to study large disordered proteins in high-field magnets.

Authors:  Abhinav Dubey; Thibault Viennet; Sandeep Chhabra; Koh Takeuchi; Hee-Chan Seo; Wolfgang Bermel; Dominique P Frueh; Haribabu Arthanari
Journal:  Chem Commun (Camb)       Date:  2022-08-23       Impact factor: 6.065

5.  Robust and transferable quantification of NMR spectral quality using IROC analysis.

Authors:  Matthew A Zambrello; Mark W Maciejewski; Adam D Schuyler; Gerard Weatherby; Jeffrey C Hoch
Journal:  J Magn Reson       Date:  2017-10-16       Impact factor: 2.229

Review 6.  Radio Signals from Live Cells: The Coming of Age of In-Cell Solution NMR.

Authors:  Enrico Luchinat; Matteo Cremonini; Lucia Banci
Journal:  Chem Rev       Date:  2022-01-21       Impact factor: 72.087

Review 7.  More than Proton Detection-New Avenues for NMR Spectroscopy of RNA.

Authors:  Robbin Schnieders; Sara Keyhani; Harald Schwalbe; Boris Fürtig
Journal:  Chemistry       Date:  2019-10-22       Impact factor: 5.236

8.  Perspective: next generation isotope-aided methods for protein NMR spectroscopy.

Authors:  Masatsune Kainosho; Yohei Miyanoiri; Tsutomu Terauchi; Mitsuhiro Takeda
Journal:  J Biomol NMR       Date:  2018-06-22       Impact factor: 2.835

Review 9.  Spotlight on the Ballet of Proteins: The Structural Dynamic Properties of Proteins Illuminated by Solution NMR.

Authors:  Yuji Tokunaga; Thibault Viennet; Haribabu Arthanari; Koh Takeuchi
Journal:  Int J Mol Sci       Date:  2020-03-06       Impact factor: 5.923

  9 in total

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