Literature DB >> 27855486

Yin-yang actions of histone methylation regulatory complexes in the brain.

Patricia Marie Garay1, Margarete Aryanka Wallner2, Shigeki Iwase1,3.   

Abstract

Dysregulation of histone methylation has emerged as a major driver of neurodevelopmental disorders including intellectual disabilities and autism spectrum disorders. Histone methyl writer and eraser enzymes generally act within multisubunit complexes rather than in isolation. However, it remains largely elusive how such complexes cooperate to achieve the precise spatiotemporal gene expression in the developing brain. Histone H3K4 methylation (H3K4me) is a chromatin signature associated with active gene-regulatory elements. We review a body of literature that supports a model in which the RAI1-containing H3K4me writer complex counterbalances the LSD1-containing H3K4me eraser complex to ensure normal brain development. This model predicts H3K4me as the nexus of previously unrelated neurodevelopmental disorders.

Entities:  

Keywords:  LSD1; PHF21A; RAI1; activity-dependent gene expression; autism spectrum disorders; chromatin regulatory complex; circadian gene expression; histone methylation; intellectual disability; neurodevelopmental disorders

Mesh:

Substances:

Year:  2016        PMID: 27855486      PMCID: PMC5289040          DOI: 10.2217/epi-2016-0090

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  126 in total

1.  Functional interplay between histone demethylase and deacetylase enzymes.

Authors:  Min Gyu Lee; Christopher Wynder; Daniel A Bochar; Mohamed-Ali Hakimi; Neil Cooch; Ramin Shiekhattar
Journal:  Mol Cell Biol       Date:  2006-09       Impact factor: 4.272

2.  Histone methylation regulates memory formation.

Authors:  Swati Gupta; Se Y Kim; Sonja Artis; David L Molfese; Armin Schumacher; J David Sweatt; Richard E Paylor; Farah D Lubin
Journal:  J Neurosci       Date:  2010-03-10       Impact factor: 6.167

3.  How pervasive are circadian oscillations?

Authors:  V R Patel; K Eckel-Mahan; P Sassone-Corsi; P Baldi
Journal:  Trends Cell Biol       Date:  2014-05-02       Impact factor: 20.808

4.  Alternative splicing of the histone demethylase LSD1/KDM1 contributes to the modulation of neurite morphogenesis in the mammalian nervous system.

Authors:  Cristina Zibetti; Antonio Adamo; Claudia Binda; Federico Forneris; Emanuela Toffolo; Chiara Verpelli; Enrico Ginelli; Andrea Mattevi; Carlo Sala; Elena Battaglioli
Journal:  J Neurosci       Date:  2010-02-17       Impact factor: 6.167

Review 5.  Chromatin modifiers and remodellers: regulators of cellular differentiation.

Authors:  Taiping Chen; Sharon Y R Dent
Journal:  Nat Rev Genet       Date:  2013-12-24       Impact factor: 53.242

Review 6.  DNA methylation and hydroxymethylation in hematologic differentiation and transformation.

Authors:  Myunggon Ko; Jungeun An; Anjana Rao
Journal:  Curr Opin Cell Biol       Date:  2015-11-18       Impact factor: 8.382

Review 7.  Handpicking epigenetic marks with PHD fingers.

Authors:  Catherine A Musselman; Tatiana G Kutateladze
Journal:  Nucleic Acids Res       Date:  2011-08-03       Impact factor: 16.971

Review 8.  Targeting histone deacetylases: a novel approach in Parkinson's disease.

Authors:  Sorabh Sharma; Rajeev Taliyan
Journal:  Parkinsons Dis       Date:  2015-01-28

9.  De novo and rare inherited mutations implicate the transcriptional coregulator TCF20/SPBP in autism spectrum disorder.

Authors:  Christian Babbs; Deborah Lloyd; Alistair T Pagnamenta; Stephen R F Twigg; Joanne Green; Simon J McGowan; Ghazala Mirza; Rebecca Naples; Vikram P Sharma; Emanuela V Volpi; Veronica J Buckle; Steven A Wall; Samantha J L Knight; Jeremy R Parr; Andrew O M Wilkie
Journal:  J Med Genet       Date:  2014-09-16       Impact factor: 6.318

10.  LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control.

Authors:  Jianxun Wang; Francesca Telese; Yuliang Tan; Wenbo Li; Chunyu Jin; Xin He; Harihar Basnet; Qi Ma; Daria Merkurjev; Xiaoyan Zhu; Zhijie Liu; Jie Zhang; Kenny Ohgi; Havilah Taylor; Ryan R White; Cagdas Tazearslan; Yousin Suh; Todd S Macfarlan; Samuel L Pfaff; Michael G Rosenfeld
Journal:  Nat Neurosci       Date:  2015-07-27       Impact factor: 24.884

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  12 in total

Review 1.  Proteins and Proteoforms: New Separation Challenges.

Authors:  Fred E Regnier; JinHee Kim
Journal:  Anal Chem       Date:  2017-12-18       Impact factor: 6.986

Review 2.  Epigenetic Etiology of Intellectual Disability.

Authors:  Shigeki Iwase; Nathalie G Bérubé; Zhaolan Zhou; Nael Nadif Kasri; Elena Battaglioli; Marilyn Scandaglia; Angel Barco
Journal:  J Neurosci       Date:  2017-11-08       Impact factor: 6.167

3.  Differential DNA methylation in experienced meditators after an intensive day of mindfulness-based practice: Implications for immune-related pathways.

Authors:  R Chaix; M Fagny; M Cosin-Tomás; M Alvarez-López; L Lemee; B Regnault; R J Davidson; A Lutz; P Kaliman
Journal:  Brain Behav Immun       Date:  2019-11-13       Impact factor: 7.217

Review 4.  Soma-to-germline transformation in chromatin-linked neurodevelopmental disorders?

Authors:  Katherine M Bonefas; Shigeki Iwase
Journal:  FEBS J       Date:  2021-10-08       Impact factor: 5.622

5.  Novel Pathogenic Variant (c.1171A>T) in PHF21A in a Female with Intellectual Disability and Craniofacial Anomalies.

Authors:  Cheonghwa Lee; Jung Yoon; Borae G Park; Baik-Lin Eun; Jung Ah Kwon
Journal:  Mol Syndromol       Date:  2022-03-09

6.  Safety, pharmacokinetics and pharmacodynamics of TAK-418, a novel inhibitor of the epigenetic modulator lysine-specific demethylase 1A.

Authors:  Wei Yin; Dimitrios Arkilo; Polyna Khudyakov; Jim Hazel; Saurabh Gupta; Maria S Quinton; Jie Lin; Deborah S Hartman; Martin M Bednar; Laura Rosen; Jens R Wendland
Journal:  Br J Clin Pharmacol       Date:  2021-06-10       Impact factor: 3.716

Review 7.  The histone variant H2A.Z in gene regulation.

Authors:  Benedetto Daniele Giaimo; Francesca Ferrante; Andreas Herchenröther; Sandra B Hake; Tilman Borggrefe
Journal:  Epigenetics Chromatin       Date:  2019-06-14       Impact factor: 4.954

8.  A Genome Model to Explain Major Features of Neurodevelopmental Disorders in Newborns.

Authors:  Bernard Friedenson
Journal:  Biomed Inform Insights       Date:  2019-07-31

9.  Integrated analysis of H2A.Z isoforms function reveals a complex interplay in gene regulation.

Authors:  Assala Lamaa; Jonathan Humbert; Marion Aguirrebengoa; Xue Cheng; Estelle Nicolas; Jacques Côté; Didier Trouche
Journal:  Elife       Date:  2020-02-28       Impact factor: 8.140

10.  The metabesity factor HMG20A potentiates astrocyte survival and reactive astrogliosis preserving neuronal integrity.

Authors:  Petra I Lorenzo; Eugenia Martin Vazquez; Livia López-Noriega; Esther Fuente-Martín; José M Mellado-Gil; Jaime M Franco; Nadia Cobo-Vuilleumier; José A Guerrero Martínez; Silvana Y Romero-Zerbo; Jesús A Perez-Cabello; Sabrina Rivero Canalejo; Antonio Campos-Caro; Christian Claude Lachaud; Alejandra Crespo Barreda; Manuel Aguilar-Diosdado; Eduardo García Fuentes; Alejandro Martin-Montalvo; Manuel Álvarez Dolado; Franz Martin; Gemma Rojo-Martinez; David Pozo; Francisco J Bérmudez-Silva; Valentine Comaills; José C Reyes; Benoit R Gauthier
Journal:  Theranostics       Date:  2021-05-12       Impact factor: 11.556

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