Literature DB >> 27846491

Going global by adapting local: A review of recent human adaptation.

Shaohua Fan1, Matthew E B Hansen1, Yancy Lo1,2, Sarah A Tishkoff3,4.   

Abstract

The spread of modern humans across the globe has led to genetic adaptations to diverse local environments. Recent developments in genomic technologies, statistical analyses, and expanded sampled populations have led to improved identification and fine-mapping of genetic variants associated with adaptations to regional living conditions and dietary practices. Ongoing efforts in sequencing genomes of indigenous populations, accompanied by the growing availability of "-omics" and ancient DNA data, promises a new era in our understanding of recent human evolution and the origins of variable traits and disease risks.
Copyright © 2016, American Association for the Advancement of Science.

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Year:  2016        PMID: 27846491      PMCID: PMC5154245          DOI: 10.1126/science.aaf5098

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  55 in total

1.  Soft shoulders ahead: spurious signatures of soft and partial selective sweeps result from linked hard sweeps.

Authors:  Daniel R Schrider; Fábio K Mendes; Matthew W Hahn; Andrew D Kern
Journal:  Genetics       Date:  2015-02-25       Impact factor: 4.562

Review 2.  Positive natural selection in the human lineage.

Authors:  P C Sabeti; S F Schaffner; B Fry; J Lohmueller; P Varilly; O Shamovsky; A Palma; T S Mikkelsen; D Altshuler; E S Lander
Journal:  Science       Date:  2006-06-16       Impact factor: 47.728

3.  Human adaptation to arsenic-rich environments.

Authors:  Carina M Schlebusch; Lucie M Gattepaille; Karin Engström; Marie Vahter; Mattias Jakobsson; Karin Broberg
Journal:  Mol Biol Evol       Date:  2015-03-03       Impact factor: 16.240

4.  Diet and the evolution of human amylase gene copy number variation.

Authors:  George H Perry; Nathaniel J Dominy; Katrina G Claw; Arthur S Lee; Heike Fiegler; Richard Redon; John Werner; Fernando A Villanea; Joanna L Mountain; Rajeev Misra; Nigel P Carter; Charles Lee; Anne C Stone
Journal:  Nat Genet       Date:  2007-09-09       Impact factor: 38.330

5.  A thrifty variant in CREBRF strongly influences body mass index in Samoans.

Authors:  Ryan L Minster; Nicola L Hawley; Chi-Ting Su; Guangyun Sun; Erin E Kershaw; Hong Cheng; Olive D Buhule; Jerome Lin; Muagututi'a Sefuiva Reupena; Satupa'itea Viali; John Tuitele; Take Naseri; Zsolt Urban; Ranjan Deka; Daniel E Weeks; Stephen T McGarvey
Journal:  Nat Genet       Date:  2016-07-25       Impact factor: 38.330

6.  Constructing genomic maps of positive selection in humans: where do we go from here?

Authors:  Joshua M Akey
Journal:  Genome Res       Date:  2009-05       Impact factor: 9.043

7.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

8.  The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation.

Authors:  Jonathan K Pritchard; Joseph K Pickrell; Graham Coop
Journal:  Curr Biol       Date:  2010-02-23       Impact factor: 10.834

Review 9.  Human pigmentation genes under environmental selection.

Authors:  Richard A Sturm; David L Duffy
Journal:  Genome Biol       Date:  2012-09-26       Impact factor: 13.583

10.  A population genetic signal of polygenic adaptation.

Authors:  Jeremy J Berg; Graham Coop
Journal:  PLoS Genet       Date:  2014-08-07       Impact factor: 5.917

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  85 in total

Review 1.  Hybridization in human evolution: Insights from other organisms.

Authors:  Rebecca R Ackermann; Michael L Arnold; Marcella D Baiz; James A Cahill; Liliana Cortés-Ortiz; Ben J Evans; B Rosemary Grant; Peter R Grant; Benedikt Hallgrimsson; Robyn A Humphreys; Clifford J Jolly; Joanna Malukiewicz; Christopher J Percival; Terrence B Ritzman; Christian Roos; Charles C Roseman; Lauren Schroeder; Fred H Smith; Kerryn A Warren; Robert K Wayne; Dietmar Zinner
Journal:  Evol Anthropol       Date:  2019-06-20

Review 2.  The importance of including ethnically diverse populations in studies of quantitative trait evolution.

Authors:  Michael A McQuillan; Chao Zhang; Sarah A Tishkoff; Alexander Platt
Journal:  Curr Opin Genet Dev       Date:  2020-06-27       Impact factor: 5.578

3.  Gene-culture coevolution in whales and dolphins.

Authors:  Hal Whitehead
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

Review 4.  African genetic diversity and adaptation inform a precision medicine agenda.

Authors:  Luisa Pereira; Leon Mutesa; Paulina Tindana; Michèle Ramsay
Journal:  Nat Rev Genet       Date:  2021-01-11       Impact factor: 53.242

5.  Personalized Therapeutics and Pharmacogenomics: Integral to Personalized Health Care.

Authors:  Wolfgang Sadee
Journal:  Pharm Res       Date:  2017-05-10       Impact factor: 4.200

6.  A positively selected FBN1 missense variant reduces height in Peruvian individuals.

Authors:  Samira Asgari; Yang Luo; Ali Akbari; Gillian M Belbin; Xinyi Li; Daniel N Harris; Martin Selig; Eric Bartell; Roger Calderon; Kamil Slowikowski; Carmen Contreras; Rosa Yataco; Jerome T Galea; Judith Jimenez; Julia M Coit; Chandel Farroñay; Rosalynn M Nazarian; Timothy D O'Connor; Harry C Dietz; Joel N Hirschhorn; Heinner Guio; Leonid Lecca; Eimear E Kenny; Esther E Freeman; Megan B Murray; Soumya Raychaudhuri
Journal:  Nature       Date:  2020-05-13       Impact factor: 49.962

Review 7.  Tissue Elasticity Bridges Cancer Stem Cells to the Tumor Microenvironment Through microRNAs: Implications for a "Watch-and-Wait" Approach to Cancer.

Authors:  Shengwen Calvin Li; Long T Vu; Jane Jianying Luo; Jiang F Zhong; Zhongjun Li; Brent A Dethlefs; William G Loudon; Mustafa H Kabeer
Journal:  Curr Stem Cell Res Ther       Date:  2017       Impact factor: 3.828

Review 8.  The IBD interactome: an integrated view of aetiology, pathogenesis and therapy.

Authors:  Heitor S P de Souza; Claudio Fiocchi; Dimitrios Iliopoulos
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2017-08-23       Impact factor: 46.802

9.  Genomic structure of the native inhabitants of Peninsular Malaysia and North Borneo suggests complex human population history in Southeast Asia.

Authors:  Chee-Wei Yew; Dongsheng Lu; Lian Deng; Lai-Ping Wong; Rick Twee-Hee Ong; Yan Lu; Xiaoji Wang; Yushimah Yunus; Farhang Aghakhanian; Siti Shuhada Mokhtar; Mohammad Zahirul Hoque; Christopher Lok-Yung Voo; Thuhairah Abdul Rahman; Jong Bhak; Maude E Phipps; Shuhua Xu; Yik-Ying Teo; Subbiah Vijay Kumar; Boon-Peng Hoh
Journal:  Hum Genet       Date:  2018-01-30       Impact factor: 4.132

Review 10.  Evolutionary and population (epi)genetics of immunity to infection.

Authors:  Luis B Barreiro; Lluis Quintana-Murci
Journal:  Hum Genet       Date:  2020-04-13       Impact factor: 4.132

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