Literature DB >> 33432191

African genetic diversity and adaptation inform a precision medicine agenda.

Luisa Pereira1,2, Leon Mutesa3, Paulina Tindana4, Michèle Ramsay5.   

Abstract

The deep evolutionary history of African populations, since the emergence of modern humans more than 300,000 years ago, has resulted in high genetic diversity and considerable population structure. Selected genetic variants have increased in frequency due to environmental adaptation, but recent exposures to novel pathogens and changes in lifestyle render some of them with properties leading to present health liabilities. The unique discoverability potential from African genomic studies promises invaluable contributions to understanding the genomic and molecular basis of health and disease. Globally, African populations are understudied, and precision medicine approaches are largely based on data from European and Asian-ancestry populations, which limits the transferability of findings to the continent of Africa. Africa needs innovative precision medicine solutions based on African data that use knowledge and implementation strategies aligned to its climatic, cultural, economic and genomic diversity.

Entities:  

Year:  2021        PMID: 33432191     DOI: 10.1038/s41576-020-00306-8

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  193 in total

1.  Data Resource Profile: Cardiovascular H3Africa Innovation Resource (CHAIR).

Authors:  Mayowa O Owolabi; Onoja M Akpa; Felix Made; Sally N Adebamowo; Akinlolu Ojo; Dwomoa Adu; Ayesha A Motala; Bongani M Mayosi; Bruce Ovbiagele; Clement Adebamowo; Bamidele Tayo; Charles Rotimi; Rufus Akinyemi; Mulugeta Gebregziabher; Fred Sarfo; Kolawole W Wahab; Rulan S Parekh; Mark E Engel; Chisala Chisala; Emmanuel Peprah; George Mensah; Ken Wiley; Jennifer Troyer; Michèle Ramsay
Journal:  Int J Epidemiol       Date:  2019-04-01       Impact factor: 7.196

Review 2.  Non-Communicable Diseases on the Rise in Sub-Saharan Africa, the Underappreciated Threat of a Dual Disease Burden.

Authors:  Herry Mapesi; Daniel Henry Paris
Journal:  Praxis (Bern 1994)       Date:  2019-11

3.  Translational Genomics in Low- and Middle-Income Countries: Opportunities and Challenges.

Authors:  Fasil Tekola-Ayele; Charles N Rotimi
Journal:  Public Health Genomics       Date:  2015-06-26       Impact factor: 2.000

4.  Toward precision health: applying artificial intelligence analytics to digital health biometric datasets.

Authors:  Travis J Cohoon; Sanjeev P Bhavnani
Journal:  Per Med       Date:  2020-06-26       Impact factor: 2.512

Review 5.  The origin and evolution of Homo sapiens.

Authors:  Chris Stringer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-07-05       Impact factor: 6.237

6.  Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago.

Authors:  Carina M Schlebusch; Helena Malmström; Torsten Günther; Per Sjödin; Alexandra Coutinho; Hanna Edlund; Arielle R Munters; Mário Vicente; Maryna Steyn; Himla Soodyall; Marlize Lombard; Mattias Jakobsson
Journal:  Science       Date:  2017-09-28       Impact factor: 47.728

7.  Building local capacity for genomics research in Africa: recommendations from analysis of publications in Sub-Saharan Africa from 2004 to 2013.

Authors:  Babatunde O Adedokun; Christopher O Olopade; Olufunmilayo I Olopade
Journal:  Glob Health Action       Date:  2016-05-12       Impact factor: 2.640

Review 8.  H3Africa: current perspectives.

Authors:  Nicola Mulder; Alash'le Abimiku; Sally N Adebamowo; Jantina de Vries; Alice Matimba; Paul Olowoyo; Michele Ramsay; Michelle Skelton; Dan J Stein
Journal:  Pharmgenomics Pers Med       Date:  2018-04-10

Review 9.  Non-communicable diseases in sub-Saharan Africa: a scoping review of large cohort studies.

Authors:  Kathleen Mudie; Melisa Mei Jin; Lindsay Kendall; Juliet Addo; Isabel Dos-Santos-Silva; Jennifer Quint; Liam Smeeth; Sarah Cook; Dorothea Nitsch; Barnabas Natamba; Francesc Xavier Gomez-Olive; Agbor Ako; Pablo Perel
Journal:  J Glob Health       Date:  2019-12       Impact factor: 4.413

10.  Research capacity. Enabling the genomic revolution in Africa.

Authors:  Charles Rotimi; Akin Abayomi; Alash'le Abimiku; Victoria May Adabayeri; Clement Adebamowo; Ezekiel Adebiyi; Adebowale D Ademola; Adebowale Adeyemo; Dwomoa Adu; Dissou Affolabi; Godfred Agongo; Samuel Ajayi; Sally Akarolo-Anthony; Rufus Akinyemi; Albert Akpalu; Marianne Alberts; Orlando Alonso Betancourt; Ahmed Mansour Alzohairy; Gobena Ameni; Olukemi Amodu; Gabriel Anabwani; Kristian Andersen; Fatiu Arogundade; Oyedunni Arulogun; Danny Asogun; Rasheed Bakare; Naby Balde; Mary Lynn Baniecki; Christine Beiswanger; Alia Benkahla; Lara Bethke; Micheal Boehnke; Vincent Boima; James Brandful; Andrew I Brooks; Frank C Brosius; Chester Brown; Bruno Bucheton; David T Burke; Barrington G Burnett; Stacy Carrington-Lawrence; Nadia Carstens; John Chisi; Alan Christoffels; Richard Cooper; Heather Cordell; Nigel Crowther; Talishiea Croxton; Jantina de Vries; Leslie Derr; Peter Donkor; Seydou Doumbia; Audrey Duncanson; Ivy Ekem; Ahmed El Sayed; Mark E Engel; John C K Enyaru; Dean Everett; Faisal M Fadlelmola; Eyitayo Fakunle; Kenneth H Fischbeck; Anne Fischer; Onikepe Folarin; Junaid Gamieldien; Robert F Garry; Simani Gaseitsiwe; Rasheed Gbadegesin; Anita Ghansah; Maria Giovanni; Parham Goesbeck; F Xavier Gomez-Olive; Donald S Grant; Ravnit Grewal; Mark Guyer; Neil A Hanchard; Christian T Happi; Scott Hazelhurst; Branwen J Hennig; Christiane Hertz-; Winston Hide; Friedhelm Hilderbrandt; Christopher Hugo-Hamman; Muntaser E Ibrahim; Regina James; Yasmina Jaufeerally-Fakim; Carolyn Jenkins; Ute Jentsch; Pan-Pan Jiang; Moses Joloba; Victor Jongeneel; Fourie Joubert; Mukthar Kader; Kathleen Kahn; Pontiano Kaleebu; Saidi H Kapiga; Samar Kamal Kassim; Ishmael Kasvosve; Jonathan Kayondo; Bernard Keavney; Adeodata Kekitiinwa; Sheik Humarr Khan; Paul Kimmel; Mary-Claire King; Robert Kleta; Mathurin Koffi; Jeffrey Kopp; Matthias Kretzler; Judit Kumuthini; Samuel Kyobe; Catherine Kyobutungi; Daniel T Lackland; Karen A Lacourciere; Guida Landouré; Rita Lawlor; Thomas Lehner; Maia Lesosky; Naomi Levitt; Katherine Littler; Zane Lombard; Jeanne F Loring; Sylvester Lyantagaye; Annette Macleod; Ebony B Madden; Chengetai R Mahomva; Julie Makani; Manmak Mamven; Marape Marape; Graeme Mardon; Patricia Marshall; Darren P Martin; Daniel Masiga; Robin Mason; Michael Mate-Kole; Enock Matovu; Mary Mayige; Bongani M Mayosi; Jean Claude Mbanya; Sheryl A McCurdy; Mark I McCarthy; Helen McIlleron; S O Mc'Ligeyo; Corrine Merle; Ana Olga Mocumbi; Charles Mondo; John V Moran; Ayesha Motala; Marva Moxey-Mims; Wata Sununguko Mpoloka; Chisomo L Msefula; Thuli Mthiyane; Nicola Mulder; Gebregziab her Mulugeta; Dieuodonne Mumba; John Musuku; Mo Nagdee; Oyekanmi Nash; Daouda Ndiaye; Anh Quynh Nguyen; Mark Nicol; Oathokwa Nkomazana; Shane Norris; Betty Nsangi; Alexander Nyarko; Moffat Nyirenda; Eileen Obe; Reginald Obiakor; Abraham Oduro; Solomon F Ofori-Acquah; Okechukwu Ogah; Stephen Ogendo; Kwaku Ohene-Frempong; Akinlolu Ojo; Timothy Olanrewaju; John Oli; Charlotte Osafo; Odile Ouwe Missi Oukem-Boyer; Bruce Ovbiagele; Andrew Owen; Mayowa Ojo Owolabi; Lukman Owolabi; Ellis Owusu-Dabo; Guillaume Pare; Rulan Parekh; Hugh G Patterton; Margaret B Penno; Jane Peterson; Rembert Pieper; Jacob Plange-Rhule; Martin Pollak; Julia Puzak; Rajkumar S Ramesar; Michele Ramsay; Rebekah Rasooly; Shiksha Reddy; Pardis C Sabeti; Kwamena Sagoe; Tunde Salako; Oumar Samassékou; Manjinder S Sandhu; Osman Sankoh; Fred Stephen Sarfo; Marie Sarr; Gasnat Shaboodien; Issa Sidibe; Gustave Simo; Martin Simuunza; Liam Smeeth; Eugene Sobngwi; Himla Soodyall; Hermann Sorgho; Oumou Sow Bah; Sudha Srinivasan; Dan J Stein; Ezra S Susser; Carmen Swanepoel; Godfred Tangwa; Andrew Tareila; Ozlem Tastan Bishop; Bamidele Tayo; Nicki Tiffin; Halidou Tinto; Ekaete Tobin; Stephen Meir Tollman; Mahamadou Traoré; Marsha J Treadwell; Jennifer Troyer; Masego Tsimako-Johnstone; Vincent Tukei; Ifeoma Ulasi; Nzovu Ulenga; Beverley van Rooyen; Ablo Prudence Wachinou; Salina P Waddy; Alisha Wade; Misaki Wayengera; James Whitworth; Louise Wideroff; Cheryl A Winkler; Sarah Winnicki; Ambroise Wonkam; Mengistu Yewondwos; Tadase sen; Nathan Yozwiak; Heather Zar
Journal:  Science       Date:  2014-06-20       Impact factor: 47.728

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  18 in total

1.  Genetic origins of schizophrenia find common ground.

Authors:  Conrad O Iyegbe; Paul F O'Reilly
Journal:  Nature       Date:  2022-04       Impact factor: 49.962

Review 2.  Advances in integrative African genomics.

Authors:  Chao Zhang; Matthew E B Hansen; Sarah A Tishkoff
Journal:  Trends Genet       Date:  2021-11-02       Impact factor: 11.639

3.  Characterization of full-length LINE-1 insertions in 154 genomes.

Authors:  Jessica S Wong; Tanaya Jadhav; Eleanor Young; Yilin Wang; Ming Xiao
Journal:  Genomics       Date:  2021-09-15       Impact factor: 5.736

Review 4.  Pathophysiology of type 2 diabetes in sub-Saharan Africans.

Authors:  Julia H Goedecke; Amy E Mendham
Journal:  Diabetologia       Date:  2022-09-27       Impact factor: 10.460

5.  HMOX1 Genetic Polymorphisms Display Ancestral Diversity and May Be Linked to Hypertensive Disorders in Pregnancy.

Authors:  Tianyanxin Sun; Giovanna I Cruz; Nima Mousavi; Ivana Marić; Alina Brewer; Ronald J Wong; Nima Aghaeepour; Nazish Sayed; Joseph C Wu; David K Stevenson; Stephanie A Leonard; Melissa Gymrek; Virginia D Winn
Journal:  Reprod Sci       Date:  2022-06-13       Impact factor: 2.924

6.  African mitochondrial haplogroup L7: a 100,000-year-old maternal human lineage discovered through reassessment and new sequencing.

Authors:  Paul A Maier; Göran Runfeldt; Roberta J Estes; Miguel G Vilar
Journal:  Sci Rep       Date:  2022-06-24       Impact factor: 4.996

7.  Enrichment analyses identify shared associations for 25 quantitative traits in over 600,000 individuals from seven diverse ancestries.

Authors:  Samuel Pattillo Smith; Sahar Shahamatdar; Wei Cheng; Selena Zhang; Joseph Paik; Misa Graff; Christopher Haiman; T C Matise; Kari E North; Ulrike Peters; Eimear Kenny; Chris Gignoux; Genevieve Wojcik; Lorin Crawford; Sohini Ramachandran
Journal:  Am J Hum Genet       Date:  2022-03-28       Impact factor: 11.043

8.  African genomic data sharing and the struggle for equitable benefit.

Authors:  Michèle Ramsay
Journal:  Patterns (N Y)       Date:  2022-01-14

9.  Population Structure of the South West Indian Ocean Islands: Implications for Precision Medicine.

Authors:  Anisah W Ghoorah; Toto Chaplain; Rakotoarivony Rindra; Smita Goorah; Ganessen Chinien; Yasmina Jaufeerally-Fakim
Journal:  Front Genet       Date:  2021-11-23       Impact factor: 4.599

10.  Projecting Ancient Ancestry in Modern-Day Arabians and Iranians: A Key Role of the Past Exposed Arabo-Persian Gulf on Human Migrations.

Authors:  Joana C Ferreira; Farida Alshamali; Francesco Montinaro; Bruno Cavadas; Antonio Torroni; Luisa Pereira; Alessandro Raveane; Veronica Fernandes
Journal:  Genome Biol Evol       Date:  2021-09-01       Impact factor: 3.416

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