Literature DB >> 32285198

Evolutionary and population (epi)genetics of immunity to infection.

Luis B Barreiro1, Lluis Quintana-Murci2,3.   

Abstract

Immune response is one of the functions that have been more strongly targeted by natural selection during human evolution. The evolutionary genetic dissection of the immune system has greatly helped to distinguish genes and functions that are essential, redundant or advantageous for human survival. It is also becoming increasingly clear that admixture between early Eurasians with now-extinct hominins such as Neanderthals or Denisovans, or admixture between modern human populations, can be beneficial for human adaptation to pathogen pressures. In this review, we discuss how the integration of population genetics with functional genomics in diverse human populations can inform about the changes in immune functions related to major lifestyle transitions (e.g., from hunting and gathering to farming), the action of natural selection to the evolution of the immune system, and the history of past epidemics. We also highlight the need of expanding the characterization of the immune system to a larger array of human populations-particularly neglected human groups historically exposed to different pathogen pressures-to fully capture the relative contribution of genetic, epigenetic, and environmental factors to immune response variation in humans.

Entities:  

Mesh:

Year:  2020        PMID: 32285198      PMCID: PMC7285878          DOI: 10.1007/s00439-020-02167-x

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  105 in total

1.  A comparison of case-control and family-based association methods: the example of sickle-cell and malaria.

Authors:  H Ackerman; S Usen; M Jallow; F Sisay-Joof; M Pinder; D P Kwiatkowski
Journal:  Ann Hum Genet       Date:  2005-09       Impact factor: 1.670

Review 2.  From evolutionary genetics to human immunology: how selection shapes host defence genes.

Authors:  Luis B Barreiro; Lluís Quintana-Murci
Journal:  Nat Rev Genet       Date:  2009-12-01       Impact factor: 53.242

Review 3.  The contribution of natural selection to present-day susceptibility to chronic inflammatory and autoimmune disease.

Authors:  Jessica F Brinkworth; Luis B Barreiro
Journal:  Curr Opin Immunol       Date:  2014-10-22       Impact factor: 7.486

4.  A Call for Blood-In Human Immunology.

Authors:  Petter Brodin; Darragh Duffy; Lluis Quintana-Murci
Journal:  Immunity       Date:  2019-06-18       Impact factor: 31.745

5.  The Genetic Legacy of the Indian Ocean Slave Trade: Recent Admixture and Post-admixture Selection in the Makranis of Pakistan.

Authors:  Romuald Laso-Jadart; Christine Harmant; Hélène Quach; Nora Zidane; Chris Tyler-Smith; Qasim Mehdi; Qasim Ayub; Lluis Quintana-Murci; Etienne Patin
Journal:  Am J Hum Genet       Date:  2017-11-09       Impact factor: 11.025

6.  Filovirus activity among selected ethnic groups inhabiting the tropical forest of equatorial Africa.

Authors:  E D Johnson; J P Gonzalez; A Georges
Journal:  Trans R Soc Trop Med Hyg       Date:  1993 Sep-Oct       Impact factor: 2.184

7.  A Functional Genomics Approach to Understand Variation in Cytokine Production in Humans.

Authors:  Yang Li; Marije Oosting; Sanne P Smeekens; Martin Jaeger; Raul Aguirre-Gamboa; Kieu T T Le; Patrick Deelen; Isis Ricaño-Ponce; Teske Schoffelen; Anne F M Jansen; Morris A Swertz; Sebo Withoff; Esther van de Vosse; Marcel van Deuren; Frank van de Veerdonk; Alexandra Zhernakova; Jos W M van der Meer; Ramnik J Xavier; Lude Franke; Leo A B Joosten; Cisca Wijmenga; Vinod Kumar; Mihai G Netea
Journal:  Cell       Date:  2016-11-03       Impact factor: 41.582

8.  Targets of balancing selection in the human genome.

Authors:  Aida M Andrés; Melissa J Hubisz; Amit Indap; Dara G Torgerson; Jeremiah D Degenhardt; Adam R Boyko; Ryan N Gutenkunst; Thomas J White; Eric D Green; Carlos D Bustamante; Andrew G Clark; Rasmus Nielsen
Journal:  Mol Biol Evol       Date:  2009-08-27       Impact factor: 16.240

9.  Full genome-based classification of rotaviruses reveals a common origin between human Wa-Like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains.

Authors:  Jelle Matthijnssens; Max Ciarlet; Erica Heiman; Ingrid Arijs; Thomas Delbeke; Sarah M McDonald; Enzo A Palombo; Miren Iturriza-Gómara; Piet Maes; John T Patton; Mustafizur Rahman; Marc Van Ranst
Journal:  J Virol       Date:  2008-01-23       Impact factor: 5.103

Review 10.  Trained immunity: A program of innate immune memory in health and disease.

Authors:  Mihai G Netea; Leo A B Joosten; Eicke Latz; Kingston H G Mills; Gioacchino Natoli; Hendrik G Stunnenberg; Luke A J O'Neill; Ramnik J Xavier
Journal:  Science       Date:  2016-04-21       Impact factor: 47.728

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  8 in total

Review 1.  Immune response and inflammation in cancer health disparities.

Authors:  Maeve Kiely; Brittany Lord; Stefan Ambs
Journal:  Trends Cancer       Date:  2021-12-27

2.  Local adaptation and archaic introgression shape global diversity at human structural variant loci.

Authors:  Stephanie M Yan; Rachel M Sherman; Dylan J Taylor; Divya R Nair; Andrew N Bortvin; Michael C Schatz; Rajiv C McCoy
Journal:  Elife       Date:  2021-09-16       Impact factor: 8.140

Review 3.  Revisiting the Hygiene Hypothesis in the Context of Autoimmunity.

Authors:  Jean-François Bach
Journal:  Front Immunol       Date:  2021-01-28       Impact factor: 7.561

Review 4.  An overview of cancer health disparities: new approaches and insights and why they matter.

Authors:  Tsion Zewdu Minas; Maeve Kiely; Anuoluwapo Ajao; Stefan Ambs
Journal:  Carcinogenesis       Date:  2021-02-11       Impact factor: 4.944

Review 5.  New insights into human immunity from ancient genomics.

Authors:  Gaspard Kerner; Etienne Patin; Lluis Quintana-Murci
Journal:  Curr Opin Immunol       Date:  2021-05-13       Impact factor: 7.268

Review 6.  Developmental Origins of Metaflammation; A Bridge to the Future Between the DOHaD Theory and Evolutionary Biology.

Authors:  Hiroaki Itoh; Megumi Ueda; Misako Suzuki; Yukiko Kohmura-Kobayashi
Journal:  Front Endocrinol (Lausanne)       Date:  2022-02-03       Impact factor: 5.555

7.  The human genetic determinism of life-threatening infectious diseases: genetic heterogeneity and physiological homogeneity?

Authors:  Jean-Laurent Casanova; Laurent Abel
Journal:  Hum Genet       Date:  2020-06       Impact factor: 4.132

8.  Blood groups of Neandertals and Denisova decrypted.

Authors:  Silvana Condemi; Stéphane Mazières; Pierre Faux; Caroline Costedoat; Andres Ruiz-Linares; Pascal Bailly; Jacques Chiaroni
Journal:  PLoS One       Date:  2021-07-28       Impact factor: 3.240

  8 in total

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