Literature DB >> 27830782

Evolution of Osteocrin as an activity-regulated factor in the primate brain.

Bulent Ataman1, Gabriella L Boulting1, David A Harmin1, Marty G Yang1, Mollie Baker-Salisbury1, Ee-Lynn Yap1, Athar N Malik1, Kevin Mei1, Alex A Rubin1, Ivo Spiegel1, Ershela Durresi1, Nikhil Sharma1, Linda S Hu1, Mihovil Pletikos2, Eric C Griffith1, Jennifer N Partlow3, Christine R Stevens4, Mazhar Adli5, Maria Chahrour6, Nenad Sestan2, Christopher A Walsh3, Vladimir K Berezovskii1, Margaret S Livingstone1, Michael E Greenberg1.   

Abstract

Sensory stimuli drive the maturation and function of the mammalian nervous system in part through the activation of gene expression networks that regulate synapse development and plasticity. These networks have primarily been studied in mice, and it is not known whether there are species- or clade-specific activity-regulated genes that control features of brain development and function. Here we use transcriptional profiling of human fetal brain cultures to identify an activity-dependent secreted factor, Osteocrin (OSTN), that is induced by membrane depolarization of human but not mouse neurons. We find that OSTN has been repurposed in primates through the evolutionary acquisition of DNA regulatory elements that bind the activity-regulated transcription factor MEF2. In addition, we demonstrate that OSTN is expressed in primate neocortex and restricts activity-dependent dendritic growth in human neurons. These findings suggest that, in response to sensory input, OSTN regulates features of neuronal structure and function that are unique to primates.

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Year:  2016        PMID: 27830782      PMCID: PMC5499253          DOI: 10.1038/nature20111

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  44 in total

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Journal:  Hum Mutat       Date:  2010-06       Impact factor: 4.878

2.  Isolation and culture of adult neurons and neurospheres.

Authors:  Gregory J Brewer; John R Torricelli
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3.  Homeostasis of intrinsic excitability in hippocampal neurones: dynamics and mechanism of the response to chronic depolarization.

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Journal:  Acta Paediatr       Date:  2010-03-29       Impact factor: 2.299

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Journal:  Neuron       Date:  2015-03-19       Impact factor: 17.173

6.  Genome-wide identification and characterization of functional neuronal activity-dependent enhancers.

Authors:  Athar N Malik; Thomas Vierbuchen; Martin Hemberg; Alex A Rubin; Emi Ling; Cameron H Couch; Hume Stroud; Ivo Spiegel; Kyle Kai-How Farh; David A Harmin; Michael E Greenberg
Journal:  Nat Neurosci       Date:  2014-09-07       Impact factor: 24.884

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Authors:  Hyo Jung Kang; Yuka Imamura Kawasawa; Feng Cheng; Ying Zhu; Xuming Xu; Mingfeng Li; André M M Sousa; Mihovil Pletikos; Kyle A Meyer; Goran Sedmak; Tobias Guennel; Yurae Shin; Matthew B Johnson; Zeljka Krsnik; Simone Mayer; Sofia Fertuzinhos; Sheila Umlauf; Steven N Lisgo; Alexander Vortmeyer; Daniel R Weinberger; Shrikant Mane; Thomas M Hyde; Anita Huttner; Mark Reimers; Joel E Kleinman; Nenad Sestan
Journal:  Nature       Date:  2011-10-26       Impact factor: 49.962

8.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

9.  SnapShot-Seq: a method for extracting genome-wide, in vivo mRNA dynamics from a single total RNA sample.

Authors:  Jesse M Gray; David A Harmin; Sarah A Boswell; Nicole Cloonan; Thomas E Mullen; Joseph J Ling; Nimrod Miller; Scott Kuersten; Yong-Chao Ma; Steven A McCarroll; Sean M Grimmond; Michael Springer
Journal:  PLoS One       Date:  2014-02-26       Impact factor: 3.240

10.  Sensory experience regulates cortical inhibition by inducing IGF1 in VIP neurons.

Authors:  A R Mardinly; I Spiegel; A Patrizi; E Centofante; J E Bazinet; C P Tzeng; C Mandel-Brehm; D A Harmin; H Adesnik; M Fagiolini; M E Greenberg
Journal:  Nature       Date:  2016-03-09       Impact factor: 49.962

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2.  Multimodal Single-Cell Analysis Reveals Physiological Maturation in the Developing Human Neocortex.

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Review 3.  Transcribing the connectome: roles for transcription factors and chromatin regulators in activity-dependent synapse development.

Authors:  Liang-Fu Chen; Allen S Zhou; Anne E West
Journal:  J Neurophysiol       Date:  2017-05-10       Impact factor: 2.714

4.  Evolution: Genomic remodelling in the primate brain.

Authors:  Justine Kupferman; Franck Polleux
Journal:  Nature       Date:  2016-11-10       Impact factor: 49.962

Review 5.  Emerging roles for MEF2 in brain development and mental disorders.

Authors:  Ahlem Assali; Adam J Harrington; Christopher W Cowan
Journal:  Curr Opin Neurobiol       Date:  2019-05-23       Impact factor: 6.627

Review 6.  Brain Transcriptome Databases: A User's Guide.

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Review 7.  Enhancing our brains: Genomic mechanisms underlying cortical evolution.

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8.  Rapid Detection of Neurodevelopmental Phenotypes in Human Neural Precursor Cells (NPCs).

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Review 9.  Activity-Regulated Transcription: Bridging the Gap between Neural Activity and Behavior.

Authors:  Ee-Lynn Yap; Michael E Greenberg
Journal:  Neuron       Date:  2018-10-24       Impact factor: 17.173

Review 10.  Noncoding RNAs in neurodegeneration.

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