Literature DB >> 30770253

Multimodal Single-Cell Analysis Reveals Physiological Maturation in the Developing Human Neocortex.

Simone Mayer1, Jiadong Chen2, Dmitry Velmeshev2, Andreas Mayer3, Ugomma C Eze4, Aparna Bhaduri2, Carlos E Cunha5, Diane Jung2, Arpana Arjun6, Emmy Li7, Beatriz Alvarado2, Shaohui Wang2, Nils Lovegren5, Michael L Gonzales8, Lukasz Szpankowski8, Anne Leyrat8, Jay A A West8, Georgia Panagiotakos9, Arturo Alvarez-Buylla10, Mercedes F Paredes2, Tomasz J Nowakowski2, Alex A Pollen2, Arnold R Kriegstein11.   

Abstract

In the developing human neocortex, progenitor cells generate diverse cell types prenatally. Progenitor cells and newborn neurons respond to signaling cues, including neurotransmitters. While single-cell RNA sequencing has revealed cellular diversity, physiological heterogeneity has yet to be mapped onto these developing and diverse cell types. By combining measurements of intracellular Ca2+ elevations in response to neurotransmitter receptor agonists and RNA sequencing of the same single cells, we show that Ca2+ responses are cell-type-specific and change dynamically with lineage progression. Physiological response properties predict molecular cell identity and additionally reveal diversity not captured by single-cell transcriptomics. We find that the serotonin receptor HTR2A selectively activates radial glia cells in the developing human, but not mouse, neocortex, and inhibiting HTR2A receptors in human radial glia disrupts the radial glial scaffold. We show highly specific neurotransmitter signaling during neurogenesis in the developing human neocortex and highlight evolutionarily divergent mechanisms of physiological signaling. Published by Elsevier Inc.

Entities:  

Keywords:  calcium imaging; differentiation; human neocortical development; intermediate progenitor cells; neurogenesis; neurotransmitter; radial glia; radial glia scaffold; serotonin; single-cell RNA sequencing

Mesh:

Substances:

Year:  2019        PMID: 30770253      PMCID: PMC7648658          DOI: 10.1016/j.neuron.2019.01.027

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  106 in total

1.  Endogenous activation of metabotropic glutamate receptors in neocortical development causes neuronal calcium oscillations.

Authors:  A C Flint; R S Dammerman; A R Kriegstein
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

2.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.

Authors:  Yang Liao; Gordon K Smyth; Wei Shi
Journal:  Bioinformatics       Date:  2013-11-13       Impact factor: 6.937

3.  The development of synapses in cerebral cortex of the human fetus.

Authors:  M E Molliver; I Kostović; H van der Loos
Journal:  Brain Res       Date:  1973-02-28       Impact factor: 3.252

4.  Serotonin, via 5-HT2A receptors, increases EPSCs in layer V pyramidal cells of prefrontal cortex by an asynchronous mode of glutamate release.

Authors:  G K Aghajanian; G J Marek
Journal:  Brain Res       Date:  1999-04-17       Impact factor: 3.252

5.  A  Complex Code of Extrinsic Influences on Cortical Progenitor Cells of Higher Mammals.

Authors:  Isabel Reillo; Camino de Juan Romero; Adrián Cárdenas; Francisco Clascá; Maria Ángeles Martínez-Martinez; Víctor Borrell
Journal:  Cereb Cortex       Date:  2017-09-01       Impact factor: 5.357

6.  Synaptophysin immunoreactivity in the human hippocampus and neocortex from 6 to 41 weeks of gestation.

Authors:  Harvey B Sarnat; Laura Flores-Sarnat; Cynthia L Trevenen
Journal:  J Neuropathol Exp Neurol       Date:  2010-03       Impact factor: 3.685

7.  Acetylcholine stimulates cortical precursor cell proliferation in vitro via muscarinic receptor activation and MAP kinase phosphorylation.

Authors:  W Ma; D Maric; B S Li; Q Hu; J D Andreadis; G M Grant; Q Y Liu; K M Shaffer; Y H Chang; L Zhang; J J Pancrazio; H C Pant; D A Stenger; J L Barker
Journal:  Eur J Neurosci       Date:  2000-04       Impact factor: 3.386

8.  KCC2 expression promotes the termination of cortical interneuron migration in a voltage-sensitive calcium-dependent manner.

Authors:  Dante Bortone; Franck Polleux
Journal:  Neuron       Date:  2009-04-16       Impact factor: 17.173

9.  Distinct cortical migrations from the medial and lateral ganglionic eminences.

Authors:  S A Anderson; O Marín; C Horn; K Jennings; J L Rubenstein
Journal:  Development       Date:  2001-02       Impact factor: 6.868

10.  The Human Cell Atlas.

Authors:  Aviv Regev; Sarah A Teichmann; Eric S Lander; Ido Amit; Christophe Benoist; Ewan Birney; Bernd Bodenmiller; Peter Campbell; Piero Carninci; Menna Clatworthy; Hans Clevers; Bart Deplancke; Ian Dunham; James Eberwine; Roland Eils; Wolfgang Enard; Andrew Farmer; Lars Fugger; Berthold Göttgens; Nir Hacohen; Muzlifah Haniffa; Martin Hemberg; Seung Kim; Paul Klenerman; Arnold Kriegstein; Ed Lein; Sten Linnarsson; Emma Lundberg; Joakim Lundeberg; Partha Majumder; John C Marioni; Miriam Merad; Musa Mhlanga; Martijn Nawijn; Mihai Netea; Garry Nolan; Dana Pe'er; Anthony Phillipakis; Chris P Ponting; Stephen Quake; Wolf Reik; Orit Rozenblatt-Rosen; Joshua Sanes; Rahul Satija; Ton N Schumacher; Alex Shalek; Ehud Shapiro; Padmanee Sharma; Jay W Shin; Oliver Stegle; Michael Stratton; Michael J T Stubbington; Fabian J Theis; Matthias Uhlen; Alexander van Oudenaarden; Allon Wagner; Fiona Watt; Jonathan Weissman; Barbara Wold; Ramnik Xavier; Nir Yosef
Journal:  Elife       Date:  2017-12-05       Impact factor: 8.140

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  21 in total

Review 1.  Neuronal differentiation strategies: insights from single-cell sequencing and machine learning.

Authors:  Nikolaos Konstantinides; Claude Desplan
Journal:  Development       Date:  2020-12-08       Impact factor: 6.868

Review 2.  Lessons from single cell sequencing in CNS cell specification and function.

Authors:  Zhen Li; William A Tyler; Tarik F Haydar
Journal:  Curr Opin Genet Dev       Date:  2020-07-14       Impact factor: 5.578

Review 3.  Molecular and cellular evolution of corticogenesis in amniotes.

Authors:  Adrián Cárdenas; Víctor Borrell
Journal:  Cell Mol Life Sci       Date:  2019-09-28       Impact factor: 9.261

Review 4.  Regulatory landscape in brain development and disease.

Authors:  Keeley Spiess; Hyejung Won
Journal:  Curr Opin Genet Dev       Date:  2020-06-18       Impact factor: 5.578

Review 5.  A matter of space and time: Emerging roles of disease-associated proteins in neural development.

Authors:  Georgia Panagiotakos; Sergiu P Pasca
Journal:  Neuron       Date:  2021-11-29       Impact factor: 17.173

Review 6.  Human organoids to model the developing human neocortex in health and disease.

Authors:  Shokoufeh Khakipoor; Elizabeth E Crouch; Simone Mayer
Journal:  Brain Res       Date:  2020-03-30       Impact factor: 3.252

Review 7.  Ion Channel Functions in Early Brain Development.

Authors:  Richard S Smith; Christopher A Walsh
Journal:  Trends Neurosci       Date:  2020-01-17       Impact factor: 13.837

8.  Single cell RNA sequencing detects persistent cell type- and methylmercury exposure paradigm-specific effects in a human cortical neurodevelopmental model.

Authors:  M Diana Neely; Shaojun Xie; Lisa M Prince; Hyunjin Kim; Anke M Tukker; Michael Aschner; Jyothi Thimmapuram; Aaron B Bowman
Journal:  Food Chem Toxicol       Date:  2021-06-02       Impact factor: 5.572

9.  Early role for a Na+,K+-ATPase (ATP1A3) in brain development.

Authors:  Richard S Smith; Marta Florio; Shyam K Akula; Jennifer E Neil; Yidi Wang; R Sean Hill; Melissa Goldman; Christopher D Mullally; Nora Reed; Luis Bello-Espinosa; Laura Flores-Sarnat; Fabiola Paoli Monteiro; Casella B Erasmo; Filippo Pinto E Vairo; Eva Morava; A James Barkovich; Joseph Gonzalez-Heydrich; Catherine A Brownstein; Steven A McCarroll; Christopher A Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-22       Impact factor: 11.205

Review 10.  The Effects of Environmental Adversities on Human Neocortical Neurogenesis Modeled in Brain Organoids.

Authors:  Kseniia Sarieva; Simone Mayer
Journal:  Front Mol Biosci       Date:  2021-06-24
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