| Literature DB >> 27820839 |
Yutaka Kamura1, Minoru Iwata1,2, Shiro Maeda3,4,5, Satomi Shinmura1, Yukiko Koshimizu1, Hisae Honoki1, Kazuhito Fukuda1, Manabu Ishiki1, Isao Usui1, Yasuo Fukushima6, Atsuko Takano7, Hiromi Kato8, Shihou Murakami9, Kiyohiro Higuchi10, Chikaaki Kobashi11, Kazuyuki Tobe1.
Abstract
AIM: Several studies have demonstrated that polymorphisms within the fat-mass and obesity-associated gene (FTO) are associated with type 2 diabetes (T2D). However, whether the effects of the FTO locus on T2D susceptibility are independent of fat-mass increases remains controversial. To investigate this issue, we examined the association of FTO variants with T2D and various aspects of BMI history during adult life in a Japanese population.Entities:
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Year: 2016 PMID: 27820839 PMCID: PMC5098825 DOI: 10.1371/journal.pone.0165523
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Clinical characteristics of the study subjects.
| Sample size (case/control) | Type 2 diabetes | Control | ||
|---|---|---|---|---|
| n | 760 | 693 | ||
| Sex (M/F) | 455/ 305 | 334/ 359 | <0.0001 | |
| Age at the time of examination (years) | 760/693 | 64.6±11.5 | 66.5±10.8 | <0.001 |
| (28~94) | (50~100) | |||
| Duration of diabetes (years) | 760/- | 13.2±9.4 | - | |
| Age at diagnosis (years) | 760/- | 51.4±11.8 | - | |
| Self-reported family history of diabetes (%) | 756/- | 56.9 | - | |
| BMI at age 20 (kg/m2) | 577/162 | 22.9±4.2 | 22.6±2.8 | 0.706 |
| Current BMI (kg/m2) at the time of examination | 760/693 | 24.6±4.4 | 22.8±3.2 | <0.0001 |
| Maximum lifetime BMI (kg/m2) | 760/693 | 27.7±4.8 | 24.8±3.2 | <0.0001 |
| Age at maximum life time BMI (years) | 760/693 | 42.6±13.7 | 47.7±16.5 | <0.0001 |
| Waist circumference (cm) (male) | 334/292 | 87.6±10.7 | 85.3±7.9 | <0.05 |
| Waist circumference (cm) (female) | 219/260 | 87.9±12.3 | 81.4±9.3 | <0.0001 |
| FPG (mmol/l) | 700/666 | 7.57±2.02 | 5.33±0.59 | <0.0001 |
| HbA1c (NGSP value) (%) | 760/681 | 7.56±1.33 | 5.54±0.24 | <0.0001 |
| HOMA-β (%) | 460/659 | 38.9±34.2 | 61.4±42.4 | <0.0001 |
| HOMA-IR (mol・μU/l2) | 460/659 | 2.25±1.79 | 1.25±0.82 | <0.0001 |
Data are means ± SD.
* Pearson’s chi-square test.
a HOMA-β and -IR were calculated in all participants except for those treated with insulin therapy.
Genotype, allele frequencies, and HWE of 2SNPs within FTO gene in the present population.
| SNP ID | Risk allele/non-risk allele | Genotype | Genotype | Risk allele frequency | HWE | Reported OR | Power (%) | Number of samples for 80% power | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T2D | CONT | T2D | CONT | T2D | CONT | |||||||||
| rs1121980 | 0.233 | 0.214 | 0.985 | 0.486 | 1.27 | 82 | 1350 | |||||||
| number of subjects | 40 | 271 | 443 | 26 | 241 | 419 | ||||||||
| rs1558902 | A/T | AA | AT | TT | AA | AT | TT | 0.203 | 0.180 | 0.884 | 0.717 | 1.27 | 78 | 1500 |
| number of subjects | 29 | 249 | 477 | 19 | 208 | 456 | ||||||||
T2D: Type 2 diabetes, CONT; control.
HWE: Hardy-Weinberg Equilibrium.
CaTS power calculator, CaTS: http://www.sph.umich.edu/csg/abecasis/CaTS/).
The prevalence of type 2 diabetes was assumed to be 10%, ∞ = 0.05.
a OR for T2D of rs9939609 reported by Frayling TM et al. (Science 316: 889–894, 2007)
Since little is known regarding the OR of rs1121980 and rs1558902 for T2D, and both SNPs and rs9939609 were found to be strong LD (r2>0.8) (S2 Table), we used the reported OR of rs9939609a) for T2D to calculate the estimated power of rs1121980 and rs1558902.
Association of the various aspects of BMI history with type 2 diabetes.
| Sex | index | β | S.E. | co-variables | |
|---|---|---|---|---|---|
| Men and Women | age and sex | ||||
| BMI at age 20 | 0.072 | 0.098 | 0.462 | ||
| Current BMI | 0.646 | 0.080 | 1.3×10−15 | ||
| Lifetime maximum BMI | 1.094 | 0.080 | 1.0×10−25 | ||
| Men | age | ||||
| BMI at age 20 | 0.188 | 0.124 | 0.129 | ||
| Current BMI | 0.381 | 0.121 | 0.002 | ||
| Lifetime maximum BMI | 1.058 | 0.116 | 6.4×10−19 | ||
| Women | age | ||||
| BMI at age 20 | 0.339 | 0.155 | 0.030 | ||
| Current BMI | 0.869 | 0.105 | 7.5×10−16 | ||
| Lifetime maximum BMI | 1.148 | 0.110 | 1.2×10−23 |
The results of linear regression analysis with adjustment for co-valuable are presented.
Various aspects of BMI are log-transformed for the analyses.
Association of 2 SNPs with current and lifetime maximum BMI in control and case subjects.
| SNP ID | Risk allele | Sex | Current BMI | Maximum BMI | ||
|---|---|---|---|---|---|---|
| β (SE) | β (SE) | |||||
| rs1121980 | A | All | -0.004(0.007) | 0.505 | 0.006(0.007) | 0.368 |
| Men | 0.008(0.009) | 0.388 | 0.022(0.009) | 0.011 | ||
| Women | -0.017(0.011) | 0.117 | -0.014(0.010) | 0.166 | ||
| rs1558902 | A | All | -0.003(0.008) | 0.641 | 0.006(0.007) | 0.392 |
| Men | 0.011(0.009) | 0.236 | 0.024(0.009) | 0.008 | ||
| Women | -0.019(0.012) | 0.114 | -0.017(0.011) | 0.111 | ||
a Risk allele reported in the previous reports.
b values are log-transformed for the analyses.
c Results of logistic regression analysis with adjustment for age, sex, and disease status are shown.
d Results of logistic regression analysis with adjustment for age and disease status are shown.
e Results of logistic regression analysis with adjustment for sex, age at the time of lifetime maximum BMI, and disease status are shown.
f Results of logistic regression analysis with adjustment for age at the time of lifetime maximum BMI, and disease status are shown.
All; n = 1453.
Men; n = 789.
Women; n = 664.
Association results between 2 SNPs and type 2 diabetes.
| SNP ID | Model 1 | Model 2 | Model 3 | ||||
|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||
| Men and Women | |||||||
| rs1121980 | 1.11 | 0.258 | 1.12 | 0.213 | 1.11 | 0.282 | |
| (0.93–1.33) | (0.94–1.35) | (0.92–1.35) | |||||
| rs1558902 | 1.15 | 0.154 | 1.16 | 0.134 | 1.15 | 0.170 | |
| (0.95–1.39) | (0.96–1.41) | (0.94–1.42) | |||||
| Men | |||||||
| rs1121980 | 1.21 | 0.127 | 1.19 | 0.154 | 1.12 | 0.382 | |
| (0.95–1.55) | (0.94–1.53) | (0.87–1.45) | |||||
| rs1558902 | 1.32 | 0.037 | 1.30 | 0.049 | 1.22 | 0.155 | |
| (1.02–1.72) | (1.00–1.69) | (0.93–1.61) | |||||
| Women | |||||||
| rs1121980 | 1.00 | 0.991 | 1.07 | 0.643 | 1.10 | 0.513 | |
| (0.76–1.31) | (0.81–1.42) | (0.82–1.47) | |||||
| rs1558902 | 0.98 | 0.874 | 1.05 | 0.735 | 1.09 | 0.577 | |
| (0.73–1.30) | (0.78–1.42) | (0.80–1.49) | |||||
Model 1: adjusted for age with or without sex in sex-combined analysis or sex-stratified analysis, respectively.
Model 2: adjusted for log-transformed current BMI and all the variables included in Model 1.
Model 3: adjusted for log-transformed maximum BMI and all the variables included in Model 1.