Literature DB >> 27803998

Accelerating proton spin diffusion in perdeuterated proteins at 100 kHz MAS.

Johannes J Wittmann1, Vipin Agarwal1,2, Johannes Hellwagner1, Alons Lends1, Riccardo Cadalbert1, Beat H Meier3, Matthias Ernst4.   

Abstract

Fast magic-angle spinning (>60 kHz) has many advantages but makes spin-diffusion-type proton-proton long-range polarization transfer inefficient and highly dependent on chemical-shift offset. Using 100%-HN-[2H,13C,15N]-ubiquitin as a model substance, we quantify the influence of the chemical-shift difference on the spin diffusion between proton spins and compare two experiments which lead to an improved chemical-shift compensation of the transfer: rotating-frame spin diffusion and a new experiment, reverse amplitude-modulated MIRROR. Both approaches enable broadband spin diffusion, but the application of the first variant is limited due to fast spin relaxation in the rotating frame. The reverse MIRROR experiment, in contrast, is a promising candidate for the determination of structurally relevant distance restraints. The applied tailored rf-irradiation schemes allow full control over the range of recoupled chemical shifts and efficiently drive spin diffusion. Here, the relevant relaxation time is the larger longitudinal relaxation time, which leads to a higher signal-to-noise ratio in the spectra.

Entities:  

Keywords:  Fast MAS; Protein structure determination; Spin diffusion

Mesh:

Substances:

Year:  2016        PMID: 27803998     DOI: 10.1007/s10858-016-0071-8

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  29 in total

1.  Low-power high-resolution solid-state NMR of peptides and proteins.

Authors:  Matthias Ernst; Marcel A Meier; Tiit Tuherm; Ago Samoson; Beat H Meier
Journal:  J Am Chem Soc       Date:  2004-04-21       Impact factor: 15.419

2.  Optimum levels of exchangeable protons in perdeuterated proteins for proton detection in MAS solid-state NMR spectroscopy.

Authors:  Umit Akbey; Sascha Lange; W Trent Franks; Rasmus Linser; Kristina Rehbein; Anne Diehl; Barth-Jan van Rossum; Bernd Reif; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2009-08-22       Impact factor: 2.835

3.  Broadband carbon-13 correlation spectra of microcrystalline proteins in very high magnetic fields.

Authors:  Markus Weingarth; Geoffrey Bodenhausen; Piotr Tekely
Journal:  J Am Chem Soc       Date:  2009-10-07       Impact factor: 15.419

4.  Broadband dipolar recoupling for magnetization transfer in solid-state NMR correlation spectroscopy.

Authors:  Luminita Duma; Daniel Abergel; Fabien Ferrage; Philippe Pelupessy; Piotr Tekely; Geoffrey Bodenhausen
Journal:  Chemphyschem       Date:  2008-06-02       Impact factor: 3.102

5.  Characterization of different water pools in solid-state NMR protein samples.

Authors:  Anja Böckmann; Carole Gardiennet; René Verel; Andreas Hunkeler; Antoine Loquet; Guido Pintacuda; Lyndon Emsley; Beat H Meier; Anne Lesage
Journal:  J Biomol NMR       Date:  2009-11       Impact factor: 2.835

6.  A proton-detected 4D solid-state NMR experiment for protein structure determination.

Authors:  Matthias Huber; Sebastian Hiller; Paul Schanda; Matthias Ernst; Anja Böckmann; René Verel; Beat H Meier
Journal:  Chemphyschem       Date:  2011-02-15       Impact factor: 3.102

7.  Broad-band homo-nuclear correlations assisted by 1H irradiation for bio-molecules in very high magnetic field at fast and ultra-fast MAS frequencies.

Authors:  Bingwen Hu; Oliver Lafon; Julien Trébosc; Qun Chen; Jean-Paul Amoureux
Journal:  J Magn Reson       Date:  2011-07-23       Impact factor: 2.229

8.  Spinning proteins, the faster, the better?

Authors:  Anja Böckmann; Matthias Ernst; Beat H Meier
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

9.  De novo 3D structure determination from sub-milligram protein samples by solid-state 100 kHz MAS NMR spectroscopy.

Authors:  Vipin Agarwal; Susanne Penzel; Kathrin Szekely; Riccardo Cadalbert; Emilie Testori; Andres Oss; Jaan Past; Ago Samoson; Matthias Ernst; Anja Böckmann; Beat H Meier
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-15       Impact factor: 15.336

10.  The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch.

Authors:  Kuo Ying Huang; Gabriele A Amodeo; Liang Tong; Ann McDermott
Journal:  Protein Sci       Date:  2011-03       Impact factor: 6.725

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  5 in total

Review 1.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

2.  Proton-detected polarization optimized experiments (POE) using ultrafast magic angle spinning solid-state NMR: Multi-acquisition of membrane protein spectra.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2019-11-28       Impact factor: 2.229

Review 3.  From Angstroms to Nanometers: Measuring Interatomic Distances by Solid-State NMR.

Authors:  Alexander A Shcherbakov; João Medeiros-Silva; Nhi Tran; Martin D Gelenter; Mei Hong
Journal:  Chem Rev       Date:  2021-10-25       Impact factor: 72.087

4.  Characterization of Protein-Protein Interfaces in Large Complexes by Solid-State NMR Solvent Paramagnetic Relaxation Enhancements.

Authors:  Carl Öster; Simone Kosol; Christoph Hartlmüller; Jonathan M Lamley; Dinu Iuga; Andres Oss; Mai-Liis Org; Kalju Vanatalu; Ago Samoson; Tobias Madl; Józef R Lewandowski
Journal:  J Am Chem Soc       Date:  2017-08-25       Impact factor: 15.419

5.  Modest Offset Difference Internuclear Selective Transfer via Homonuclear Dipolar Coupling.

Authors:  Evgeny Nimerovsky; Eszter E Najbauer; Kumar Tekwani Movellan; Kai Xue; Stefan Becker; Loren B Andreas
Journal:  J Phys Chem Lett       Date:  2022-02-08       Impact factor: 6.475

  5 in total

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