Literature DB >> 27798609

Simultaneous dual-color fluorescence lifetime imaging with novel red-shifted fluorescent proteins.

Tal Laviv1, Benjamin B Kim2, Jun Chu2,3, Amy J Lam2,3, Michael Z Lin2,3,4, Ryohei Yasuda1.   

Abstract

We describe a red-shifted fluorescence resonance energy transfer (FRET) pair optimized for dual-color fluorescence lifetime imaging (FLIM). This pair utilizes a newly developed FRET donor, monomeric cyan-excitable red fluorescent protein (mCyRFP1), which has a large Stokes shift and a monoexponential fluorescence lifetime decay. When used together with EGFP-based biosensors, the new pair enables simultaneous imaging of the activities of two signaling molecules in single dendritic spines undergoing structural plasticity.

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Year:  2016        PMID: 27798609      PMCID: PMC5322478          DOI: 10.1038/nmeth.4046

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  17 in total

1.  Two-photon imaging in living brain slices.

Authors:  Z F Mainen; M Maletic-Savatic; S H Shi; Y Hayashi; R Malinow; K Svoboda
Journal:  Methods       Date:  1999-06       Impact factor: 3.608

Review 2.  FRET imaging.

Authors:  Elizabeth A Jares-Erijman; Thomas M Jovin
Journal:  Nat Biotechnol       Date:  2003-11       Impact factor: 54.908

Review 3.  A guide to choosing fluorescent proteins.

Authors:  Nathan C Shaner; Paul A Steinbach; Roger Y Tsien
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

4.  Highly sensitive and quantitative FRET-FLIM imaging in single dendritic spines using improved non-radiative YFP.

Authors:  Hideji Murakoshi; Seok-Jin Lee; Ryohei Yasuda
Journal:  Brain Cell Biol       Date:  2008-05-30

5.  GFP-like proteins stably accumulate in lysosomes.

Authors:  Hiroyuki Katayama; Akitsugu Yamamoto; Noboru Mizushima; Tamotsu Yoshimori; Atsushi Miyawaki
Journal:  Cell Struct Funct       Date:  2008-02-06       Impact factor: 2.212

6.  A dark green fluorescent protein as an acceptor for measurement of Förster resonance energy transfer.

Authors:  Hideji Murakoshi; Akihiro C E Shibata; Yoshihisa Nakahata; Junichi Nabekura
Journal:  Sci Rep       Date:  2015-10-15       Impact factor: 4.379

7.  Quantitative assessment of fluorescent proteins.

Authors:  Paula J Cranfill; Brittney R Sell; Michelle A Baird; John R Allen; Zeno Lavagnino; H Martijn de Gruiter; Gert-Jan Kremers; Michael W Davidson; Alessandro Ustione; David W Piston
Journal:  Nat Methods       Date:  2016-05-30       Impact factor: 28.547

8.  A bright cyan-excitable orange fluorescent protein facilitates dual-emission microscopy and enhances bioluminescence imaging in vivo.

Authors:  Jun Chu; Younghee Oh; Alex Sens; Niloufar Ataie; Hod Dana; John J Macklin; Tal Laviv; Erik S Welf; Kevin M Dean; Feijie Zhang; Benjamin B Kim; Clement Tran Tang; Michelle Hu; Michelle A Baird; Michael W Davidson; Mark A Kay; Reto Fiolka; Ryohei Yasuda; Douglas S Kim; Ho-Leung Ng; Michael Z Lin
Journal:  Nat Biotechnol       Date:  2016-05-30       Impact factor: 54.908

9.  Activation of CaMKII in single dendritic spines during long-term potentiation.

Authors:  Seok-Jin R Lee; Yasmin Escobedo-Lozoya; Erzsebet M Szatmari; Ryohei Yasuda
Journal:  Nature       Date:  2009-03-19       Impact factor: 49.962

10.  Ultrasensitive fluorescent proteins for imaging neuronal activity.

Authors:  Tsai-Wen Chen; Trevor J Wardill; Yi Sun; Stefan R Pulver; Sabine L Renninger; Amy Baohan; Eric R Schreiter; Rex A Kerr; Michael B Orger; Vivek Jayaraman; Loren L Looger; Karel Svoboda; Douglas S Kim
Journal:  Nature       Date:  2013-07-18       Impact factor: 49.962

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  39 in total

1.  Volumetric Lissajous confocal microscopy with tunable spatiotemporal resolution.

Authors:  Takahiro Deguchi; Paolo Bianchini; Gemma Palazzolo; Michele Oneto; Alberto Diaspro; Martí Duocastella
Journal:  Biomed Opt Express       Date:  2020-10-13       Impact factor: 3.732

2.  Phasor S-FLIM: a new paradigm for fast and robust spectral fluorescence lifetime imaging.

Authors:  Lorenzo Scipioni; Alessandro Rossetta; Giulia Tedeschi; Enrico Gratton
Journal:  Nat Methods       Date:  2021-04-15       Impact factor: 28.547

3.  NMDA Receptor Enhances Correlation of Spontaneous Activity in Neonatal Barrel Cortex.

Authors:  Hidenobu Mizuno; Madhura S Rao; Hiromi Mizuno; Takuya Sato; Shingo Nakazawa; Takuji Iwasato
Journal:  J Neurosci       Date:  2020-12-28       Impact factor: 6.167

4.  Developmental Phase Transitions in Spatial Organization of Spontaneous Activity in Postnatal Barrel Cortex Layer 4.

Authors:  Shingo Nakazawa; Yumiko Yoshimura; Masahiro Takagi; Hidenobu Mizuno; Takuji Iwasato
Journal:  J Neurosci       Date:  2020-09-04       Impact factor: 6.167

5.  Genetically Encoded, Photostable Indicators to Image Dynamic Zn2+ Secretion of Pancreatic Islets.

Authors:  Minghai Chen; Shen Zhang; Yuan Xing; Xinyu Li; Yi He; Yong Wang; José Oberholzer; Hui-Wang Ai
Journal:  Anal Chem       Date:  2019-09-10       Impact factor: 6.986

Review 6.  Biophysics of Biochemical Signaling in Dendritic Spines: Implications in Synaptic Plasticity.

Authors:  Ryohei Yasuda
Journal:  Biophys J       Date:  2017-08-30       Impact factor: 4.033

7.  Endfoot regeneration restricts radial glial state and prevents translocation into the outer subventricular zone in early mammalian brain development.

Authors:  Ikumi Fujita; Atsunori Shitamukai; Fumiya Kusumoto; Shun Mase; Taeko Suetsugu; Ayaka Omori; Kagayaki Kato; Takaya Abe; Go Shioi; Daijiro Konno; Fumio Matsuzaki
Journal:  Nat Cell Biol       Date:  2019-12-23       Impact factor: 28.824

8.  Molecular Mechanisms of Non-ionotropic NMDA Receptor Signaling in Dendritic Spine Shrinkage.

Authors:  Ivar S Stein; Deborah K Park; Juan C Flores; Jennifer N Jahncke; Karen Zito
Journal:  J Neurosci       Date:  2020-04-22       Impact factor: 6.167

9.  A guide to choosing fluorescent protein combinations for flow cytometric analysis based on spectral overlap.

Authors:  Benjamin Kleeman; Andre Olsson; Tess Newkold; Matt Kofron; Monica DeLay; David Hildeman; H Leighton Grimes
Journal:  Cytometry A       Date:  2018-03-13       Impact factor: 4.355

10.  In Vivo Imaging of the Coupling between Neuronal and CREB Activity in the Mouse Brain.

Authors:  Tal Laviv; Benjamin Scholl; Paula Parra-Bueno; Beth Foote; Chuqiu Zhang; Long Yan; Yuki Hayano; Jun Chu; Ryohei Yasuda
Journal:  Neuron       Date:  2019-12-26       Impact factor: 17.173

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