Literature DB >> 27749839

Genetic code expansion for multiprotein complex engineering.

Christine Koehler1, Paul F Sauter2, Mirella Wawryszyn2, Gemma Estrada Girona1, Kapil Gupta3, Jonathan J M Landry1, Markus Hsi-Yang Fritz1, Ksenija Radic1, Jan-Erik Hoffmann1, Zhuo A Chen4, Juan Zou4, Piau Siong Tan1, Bence Galik5, Sini Junttila5, Peggy Stolt-Bergner5, Giancarlo Pruneri6, Attila Gyenesei5, Carsten Schultz1, Moritz Bosse Biskup2, Hueseyin Besir1, Vladimir Benes1, Juri Rappsilber4,7, Martin Jechlinger1, Jan O Korbel1, Imre Berger3,8, Stefan Braese2,9, Edward A Lemke1.   

Abstract

We present a baculovirus-based protein engineering method that enables site-specific introduction of unique functionalities in a eukaryotic protein complex recombinantly produced in insect cells. We demonstrate the versatility of this efficient and robust protein production platform, 'MultiBacTAG', (i) for the fluorescent labeling of target proteins and biologics using click chemistries, (ii) for glycoengineering of antibodies, and (iii) for structure-function studies of novel eukaryotic complexes using single-molecule Förster resonance energy transfer as well as site-specific crosslinking strategies.

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Year:  2016        PMID: 27749839     DOI: 10.1038/nmeth.4032

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  38 in total

1.  Protein complex expression by using multigene baculoviral vectors.

Authors:  Daniel J Fitzgerald; Philipp Berger; Christiane Schaffitzel; Kazuhiro Yamada; Timothy J Richmond; Imre Berger
Journal:  Nat Methods       Date:  2006-12       Impact factor: 28.547

2.  A facile system for encoding unnatural amino acids in mammalian cells.

Authors:  Peng R Chen; Dan Groff; Jiantao Guo; Weijia Ou; Susan Cellitti; Bernhard H Geierstanger; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

3.  TFIIA interacts with TFIID via association with TATA-binding protein and TAF40.

Authors:  S M Kraemer; R T Ranallo; R C Ogg; L A Stargell
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

4.  The exploding genetic code.

Authors:  Edward A Lemke
Journal:  Chembiochem       Date:  2014-07-30       Impact factor: 3.164

5.  Single molecule study of the intrinsically disordered FG-repeat nucleoporin 153.

Authors:  Sigrid Milles; Edward A Lemke
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

6.  Standardization of pathologic evaluation and reporting of postneoadjuvant specimens in clinical trials of breast cancer: recommendations from an international working group.

Authors:  Elena Provenzano; Veerle Bossuyt; Giuseppe Viale; David Cameron; Sunil Badve; Carsten Denkert; Gaëtan MacGrogan; Frédérique Penault-Llorca; Judy Boughey; Giuseppe Curigliano; J Michael Dixon; Laura Esserman; Gerd Fastner; Thorsten Kuehn; Florentia Peintinger; Gunter von Minckwitz; Julia White; Wei Yang; W Fraser Symmans
Journal:  Mod Pathol       Date:  2015-07-24       Impact factor: 7.842

7.  Minimal tags for rapid dual-color live-cell labeling and super-resolution microscopy.

Authors:  Ivana Nikić; Tilman Plass; Oliver Schraidt; Jędrzej Szymański; John A G Briggs; Carsten Schultz; Edward A Lemke
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-28       Impact factor: 15.336

8.  Deep and highly sensitive proteome coverage by LC-MS/MS without prefractionation.

Authors:  Suman S Thakur; Tamar Geiger; Bhaswati Chatterjee; Peter Bandilla; Florian Fröhlich; Juergen Cox; Matthias Mann
Journal:  Mol Cell Proteomics       Date:  2011-05-17       Impact factor: 5.911

9.  Expanding the genetic code of yeast for incorporation of diverse unnatural amino acids via a pyrrolysyl-tRNA synthetase/tRNA pair.

Authors:  Susan M Hancock; Rajendra Uprety; Alexander Deiters; Jason W Chin
Journal:  J Am Chem Soc       Date:  2010-10-27       Impact factor: 15.419

10.  SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.

Authors:  Ruibang Luo; Binghang Liu; Yinlong Xie; Zhenyu Li; Weihua Huang; Jianying Yuan; Guangzhu He; Yanxiang Chen; Qi Pan; Yunjie Liu; Jingbo Tang; Gengxiong Wu; Hao Zhang; Yujian Shi; Yong Liu; Chang Yu; Bo Wang; Yao Lu; Changlei Han; David W Cheung; Siu-Ming Yiu; Shaoliang Peng; Zhu Xiaoqian; Guangming Liu; Xiangke Liao; Yingrui Li; Huanming Yang; Jian Wang; Tak-Wah Lam; Jun Wang
Journal:  Gigascience       Date:  2012-12-27       Impact factor: 6.524

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  20 in total

Review 1.  A molecular engineering toolbox for the structural biologist.

Authors:  Galia T Debelouchina; Tom W Muir
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

Review 2.  Playing with the Molecules of Life.

Authors:  Douglas D Young; Peter G Schultz
Journal:  ACS Chem Biol       Date:  2018-03-02       Impact factor: 5.100

Review 3.  MultiBac: from protein complex structures to synthetic viral nanosystems.

Authors:  Martin Pelosse; Hannah Crocker; Barbara Gorda; Paul Lemaire; Jens Rauch; Imre Berger
Journal:  BMC Biol       Date:  2017-10-30       Impact factor: 7.431

4.  Rapid and Efficient Generation of Stable Antibody-Drug Conjugates via an Encoded Cyclopropene and an Inverse-Electron-Demand Diels-Alder Reaction.

Authors:  Benjamí Oller-Salvia; Gene Kym; Jason W Chin
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-14       Impact factor: 15.336

5.  Advancing the Frontiers of Chemical Protein Synthesis-The 7th CPS Meeting, Haifa, Israel.

Authors:  Anne C Conibear; Markus Muttenthaler
Journal:  Cell Chem Biol       Date:  2018-03-15       Impact factor: 8.116

6.  Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID.

Authors:  Kapil Gupta; Aleksandra A Watson; Tiago Baptista; Elisabeth Scheer; Anna L Chambers; Christine Koehler; Juan Zou; Ima Obong-Ebong; Eaazhisai Kandiah; Arturo Temblador; Adam Round; Eric Forest; Petr Man; Christoph Bieniossek; Ernest D Laue; Edward A Lemke; Juri Rappsilber; Carol V Robinson; Didier Devys; Làszlò Tora; Imre Berger
Journal:  Elife       Date:  2017-11-07       Impact factor: 8.140

Review 7.  Protein Tertiary Structure by Crosslinking/Mass Spectrometry.

Authors:  Michael Schneider; Adam Belsom; Juri Rappsilber
Journal:  Trends Biochem Sci       Date:  2018-01-31       Impact factor: 13.807

Review 8.  Bifunctional Non-Canonical Amino Acids: Combining Photo-Crosslinking with Click Chemistry.

Authors:  Jan-Erik Hoffmann
Journal:  Biomolecules       Date:  2020-04-10

9.  Genetic Encoding of a Non-Canonical Amino Acid for the Generation of Antibody-Drug Conjugates Through a Fast Bioorthogonal Reaction.

Authors:  Benjamí Oller-Salvia
Journal:  J Vis Exp       Date:  2018-09-14       Impact factor: 1.355

10.  Evaluation and optimisation of unnatural amino acid incorporation and bioorthogonal bioconjugation for site-specific fluorescent labelling of proteins expressed in mammalian cells.

Authors:  Leonhard Jakob; Alexander Gust; Dina Grohmann
Journal:  Biochem Biophys Rep       Date:  2018-11-06
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