Literature DB >> 27702892

Predictability and hierarchy in Drosophila behavior.

Gordon J Berman1, William Bialek2, Joshua W Shaevitz2.   

Abstract

Even the simplest of animals exhibit behavioral sequences with complex temporal dynamics. Prominent among the proposed organizing principles for these dynamics has been the idea of a hierarchy, wherein the movements an animal makes can be understood as a set of nested subclusters. Although this type of organization holds potential advantages in terms of motion control and neural circuitry, measurements demonstrating this for an animal's entire behavioral repertoire have been limited in scope and temporal complexity. Here, we use a recently developed unsupervised technique to discover and track the occurrence of all stereotyped behaviors performed by fruit flies moving in a shallow arena. Calculating the optimally predictive representation of the fly's future behaviors, we show that fly behavior exhibits multiple time scales and is organized into a hierarchical structure that is indicative of its underlying behavioral programs and its changing internal states.

Entities:  

Keywords:  Drosophila; behavior; hierarchy; information bottleneck

Mesh:

Year:  2016        PMID: 27702892      PMCID: PMC5081631          DOI: 10.1073/pnas.1607601113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Predictability, complexity, and learning.

Authors:  W Bialek; I Nemenman; N Tishby
Journal:  Neural Comput       Date:  2001-11       Impact factor: 2.026

2.  Facilitating postural control: effects on the reaching behavior of 6-month-old infants.

Authors:  Brian Hopkins; Louise Rönnqvist
Journal:  Dev Psychobiol       Date:  2002-03       Impact factor: 3.038

3.  The cognitive revolution: a historical perspective.

Authors:  George A. Miller
Journal:  Trends Cogn Sci       Date:  2003-03       Impact factor: 20.229

4.  Influence of posture and voluntary background contraction upon compound muscle action potentials from anterior tibial and soleus muscle following transcranial magnetic stimulation.

Authors:  H Ackermann; E Scholz; W Koehler; J Dichgans
Journal:  Electroencephalogr Clin Neurophysiol       Date:  1991-02

5.  Measuring the hierarchy of feedforward networks.

Authors:  Bernat Corominas-Murtra; Carlos Rodríguez-Caso; Joaquín Goñi; Ricard Solé
Journal:  Chaos       Date:  2011-03       Impact factor: 3.642

6.  Functional clustering of neurons in motor cortex determined by cellular resolution imaging in awake behaving mice.

Authors:  Daniel A Dombeck; Michael S Graziano; David W Tank
Journal:  J Neurosci       Date:  2009-11-04       Impact factor: 6.167

7.  The organization of grooming in budgerigars.

Authors:  L Lefebvre
Journal:  Behav Processes       Date:  1982-06       Impact factor: 1.777

8.  A suppression hierarchy among competing motor programs drives sequential grooming in Drosophila.

Authors:  Andrew M Seeds; Primoz Ravbar; Phuong Chung; Stefanie Hampel; Frank M Midgley; Brett D Mensh; Julie H Simpson
Journal:  Elife       Date:  2014-08-19       Impact factor: 8.140

9.  Mapping the stereotyped behaviour of freely moving fruit flies.

Authors:  Gordon J Berman; Daniel M Choi; William Bialek; Joshua W Shaevitz
Journal:  J R Soc Interface       Date:  2014-10-06       Impact factor: 4.118

10.  Hierarchical organization of human cortical networks in health and schizophrenia.

Authors:  Danielle S Bassett; Edward Bullmore; Beth A Verchinski; Venkata S Mattay; Daniel R Weinberger; Andreas Meyer-Lindenberg
Journal:  J Neurosci       Date:  2008-09-10       Impact factor: 6.167

View more
  47 in total

1.  An unsupervised method for quantifying the behavior of paired animals.

Authors:  Ugne Klibaite; Gordon J Berman; Jessica Cande; David L Stern; Joshua W Shaevitz
Journal:  Phys Biol       Date:  2017-02-16       Impact factor: 2.583

2.  Statistical structure of locomotion and its modulation by odors.

Authors:  Liangyu Tao; Siddhi Ozarkar; Jeffrey M Beck; Vikas Bhandawat
Journal:  Elife       Date:  2019-01-08       Impact factor: 8.140

3.  Sniff-synchronized, gradient-guided olfactory search by freely moving mice.

Authors:  Teresa M Findley; David G Wyrick; Jennifer L Cramer; Morgan A Brown; Blake Holcomb; Robin Attey; Dorian Yeh; Eric Monasevitch; Nelly Nouboussi; Isabelle Cullen; Jeremea O Songco; Jared F King; Yashar Ahmadian; Matthew C Smear
Journal:  Elife       Date:  2021-05-04       Impact factor: 8.140

4.  Context-dependent modulation of natural approach behaviour in mice.

Authors:  Nicole M Procacci; Kelsey M Allen; Gael E Robb; Rebecca Ijekah; Hudson Lynam; Jennifer L Hoy
Journal:  Proc Biol Sci       Date:  2020-09-02       Impact factor: 5.349

Review 5.  Challenges and solutions for studying collective animal behaviour in the wild.

Authors:  Lacey F Hughey; Andrew M Hein; Ariana Strandburg-Peshkin; Frants H Jensen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-19       Impact factor: 6.237

6.  An energy landscape approach to locomotor transitions in complex 3D terrain.

Authors:  Ratan Othayoth; George Thoms; Chen Li
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-15       Impact factor: 11.205

Review 7.  Computational Neuroethology: A Call to Action.

Authors:  Sandeep Robert Datta; David J Anderson; Kristin Branson; Pietro Perona; Andrew Leifer
Journal:  Neuron       Date:  2019-10-09       Impact factor: 17.173

8.  An automatic behavior recognition system classifies animal behaviors using movements and their temporal context.

Authors:  Primoz Ravbar; Kristin Branson; Julie H Simpson
Journal:  J Neurosci Methods       Date:  2019-08-12       Impact factor: 2.390

9.  Hierarchical Compression Reveals Sub-Second to Day-Long Structure in Larval Zebrafish Behavior.

Authors:  Marcus Ghosh; Jason Rihel
Journal:  eNeuro       Date:  2020-07-22

Review 10.  Quantifying behavior to solve sensorimotor transformations: advances from worms and flies.

Authors:  Adam J Calhoun; Mala Murthy
Journal:  Curr Opin Neurobiol       Date:  2017-08-30       Impact factor: 6.627

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.