Literature DB >> 27695205

Gamma and Ion-Beam Irradiation of DNA: Free Radical Mechanisms, Electron Effects, and Radiation Chemical Track Structure.

Michael D Sevilla1, David Becker1, Anil Kumar1, Amitava Adhikary1.   

Abstract

The focus of our laboratory's investigation is to study the direct-type DNA damage mechanisms resulting from γ-ray and ion-beam radiation-induced free radical processes in DNA which lead to molecular damage important to cellular survival. This work compares the results of low LET (γ-) and high LET (ion-beam) radiation to develop a chemical track structure model for ion-beam radiation damage to DNA. Recent studies on protonation states of cytosine cation radicals in the N1-substituted cytosine derivatives in their ground state and 5-methylcytosine cation radicals in ground as well as in excited state are described. Our results exhibit a radical signature of excitations in 5-methylcytosine cation radical. Moreover, our recent theoretical studies elucidate the role of electron-induced reactions (low energy electrons (LEE), presolvated electrons (epre-), and aqueous (or, solvated) electrons (eaq-)). Finally DFT calculations of the ionization potentials of various sugar radicals show the relative reactivity of these species.

Entities:  

Keywords:  DNA-radicals; density functional theory (DFT); electron spin resonance (ESR); ion-beam radiation; low energy electrons (LEE); γ-radiation

Year:  2016        PMID: 27695205      PMCID: PMC5040349          DOI: 10.1016/j.radphyschem.2016.04.022

Source DB:  PubMed          Journal:  Radiat Phys Chem Oxf Engl 1993        ISSN: 0969-806X            Impact factor:   2.858


  62 in total

1.  Decomposition of thymidine by low-energy electrons: implications for the molecular mechanisms of single-strand breaks in DNA.

Authors:  Sylwia Ptasińska; Stephan Denifl; Sascha Gohlke; Paul Scheier; Eugen Illenberger; Tilmann D Märk
Journal:  Angew Chem Int Ed Engl       Date:  2006-03-13       Impact factor: 15.336

2.  Prototropic equilibria in DNA containing one-electron oxidized GC: intra-duplex vs. duplex to solvent deprotonation.

Authors:  Amitava Adhikary; Anil Kumar; Shawn A Munafo; Deepti Khanduri; Michael D Sevilla
Journal:  Phys Chem Chem Phys       Date:  2010       Impact factor: 3.676

3.  The structure of the hydrated electron. Part 1. Magnetic resonance of internally trapping water anions: a density functional theory study.

Authors:  Ilya A Shkrob
Journal:  J Phys Chem A       Date:  2007-05-27       Impact factor: 2.781

4.  Highly oxidizing excited states of one-electron-oxidized guanine in DNA: wavelength and pH dependence.

Authors:  Deepti Khanduri; Amitava Adhikary; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2011-03-07       Impact factor: 15.419

5.  Comment on "Does the hydrated electron occupy a cavity?".

Authors:  László Turi; Adám Madarász
Journal:  Science       Date:  2011-03-18       Impact factor: 47.728

6.  The influence of hydration on the absolute yields of primary ionic free radicals in gamma-irradiated DNA at 77 K. I. Total radical yields.

Authors:  W Wang; D Becker; M D Sevilla
Journal:  Radiat Res       Date:  1993-08       Impact factor: 2.841

7.  Formation of 8-oxo-7,8-dihydroguanine-radicals in gamma-irradiated DNA by multiple one-electron oxidations.

Authors:  Lata I Shukla; Amitava Adhikary; Robert Pazdro; David Becker; Michael D Sevilla
Journal:  Nucleic Acids Res       Date:  2004-12-15       Impact factor: 16.971

8.  Sugar radicals in DNA: isolation of neutral radicals in gamma-irradiated DNA by hole and electron scavenging.

Authors:  Lata I Shukla; Robert Pazdro; David Becker; Michael D Sevilla
Journal:  Radiat Res       Date:  2005-05       Impact factor: 2.841

9.  Presolvated low energy electron attachment to peptide methyl esters in aqueous solution: C-O bond cleavage at 77 K.

Authors:  Jeanette Kheir; Lidia Chomicz; Alyson Engle; Janusz Rak; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2013-02-28       Impact factor: 2.991

10.  Kr-86 ion-beam irradiation of hydrated DNA: free radical and unaltered base yields.

Authors:  David Becker; Amitava Adhikary; Smedley T Tetteh; Arthur W Bull; Michael D Sevilla
Journal:  Radiat Res       Date:  2012-10-29       Impact factor: 2.841

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  13 in total

1.  Reactivity of prehydrated electrons toward nucleobases and nucleotides in aqueous solution.

Authors:  Jun Ma; Furong Wang; Sergey A Denisov; Amitava Adhikary; Mehran Mostafavi
Journal:  Sci Adv       Date:  2017-12-15       Impact factor: 14.136

Review 2.  Reaction of Electrons with DNA: Radiation Damage to Radiosensitization.

Authors:  Anil Kumar; David Becker; Amitava Adhikary; Michael D Sevilla
Journal:  Int J Mol Sci       Date:  2019-08-16       Impact factor: 5.923

Review 3.  Ultrafast Processes Occurring in Radiolysis of Highly Concentrated Solutions of Nucleosides/Tides.

Authors:  Jun Ma; Sergey A Denisov; Amitava Adhikary; Mehran Mostafavi
Journal:  Int J Mol Sci       Date:  2019-10-08       Impact factor: 5.923

4.  Length and Energy Dependence of Low-Energy Electron-Induced Strand Breaks in Poly(A) DNA.

Authors:  Kenny Ebel; Ilko Bald
Journal:  Int J Mol Sci       Date:  2019-12-23       Impact factor: 5.923

5.  [How can an electron induce oxidative damage in DNA in solution].

Authors:  Jun Ma; Sergey Denisov; Amitava Adhikary; Mehran Mostafavi
Journal:  Actual Chim       Date:  2020-04

6.  SOMO-HOMO Level Inversion in Biologically Important Radicals.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2017-12-21       Impact factor: 2.991

7.  Live Dynamics of 53BP1 Foci Following Simultaneous Induction of Clustered and Dispersed DNA Damage in U2OS Cells.

Authors:  Alice Sollazzo; Beata Brzozowska; Lei Cheng; Lovisa Lundholm; Harry Scherthan; Andrzej Wojcik
Journal:  Int J Mol Sci       Date:  2018-02-08       Impact factor: 5.923

8.  Metabolic characterization of isocitrate dehydrogenase (IDH) mutant and IDH wildtype gliomaspheres uncovers cell type-specific vulnerabilities.

Authors:  Matthew Garrett; Jantzen Sperry; Daniel Braas; Weihong Yan; Thuc M Le; Jack Mottahedeh; Kirsten Ludwig; Ascia Eskin; Yue Qin; Rachelle Levy; Joshua J Breunig; Frank Pajonk; Thomas G Graeber; Caius G Radu; Heather Christofk; Robert M Prins; Albert Lai; Linda M Liau; Giovanni Coppola; Harley I Kornblum
Journal:  Cancer Metab       Date:  2018-04-17

9.  Probing Coherent Vibrations of Organic Phosphonate Radical Cations with Femtosecond Time-Resolved Mass Spectrometry.

Authors:  Derrick Ampadu Boateng; Mi'Kayla D Word; Katharine Moore Tibbetts
Journal:  Molecules       Date:  2019-01-31       Impact factor: 4.411

10.  Development of Oxytolerant Salmonella typhimurium Using Radiation Mutation Technology (RMT) for Cancer Therapy.

Authors:  Shuang Gao; Jong-Hyun Jung; Shun-Mei Lin; A-Yeung Jang; Yong Zhi; Ki Bum Ahn; Hyun-Jung Ji; Jae Hyang Lim; Huichen Guo; Hyon E Choy; Sangyong Lim; Ho Seong Seo
Journal:  Sci Rep       Date:  2020-02-28       Impact factor: 4.379

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