Literature DB >> 32747845

[How can an electron induce oxidative damage in DNA in solution].

Jun Ma1, Sergey Denisov2, Amitava Adhikary3, Mehran Mostafavi4.   

Abstract

DNA damage caused by the dissociative electron attachment (DEA) has been well-studied in the gas and solid phases. However, understanding of this process at the fundamental level in solution is still a challenge. The electrons, after losing their kinetic energy via ionization and excitation events, are thermalized and undergo a multistep hydration process with a time constant of ca. ≤1 ps, to becoming fully trapped as a hydrated or solvated electron (esol - or eaq -). Prior to the formation of esol -, the electron exists in its presolvated (or prehydrated) state (epre -) with no kinetic energy. We used picosecond pulse radiolysis to generate electrons in water or in liquid diethylene glycol (DEG) to observe the dynamics of capture of these electrons by DNA/RNA bases, nucleosides, and nucleotides. Contrary to the hypotheses in the literature that the presolvated electrons (epre -) are captured well by the DNA-nucleosides/tides and the transient negative ions (TNIs) cause strand breaks, we first show that the quasi-free electrons with kinetic energy (eqf -) or epre -cannot be captured by guanine and adenine at very long distances in aqueous solutions with concentrations lower than 50 mM. However, the observation of a substantial decrease in the initial yield of esol - as a function of nucleoside/nucleotide concentrations accompanied by the formation of the nucleotide anion radicals provides direct evidence of an ultrafast step involving radiation-produced electron-mediated DNA damage via DEA. Transient signal analysis suggests that the dissociation channel of TNIs in nucleotide solutions is not even probable up to 0.25 M. On the other hand, in diethylene glycol, we demonstrate that unlike esol - and epre -, eqf - effectively attaches itself to the RNA-nucleoside, ribothymidine, forming the TNI in the excited state (TNI*) that undergoes the N1-C1' glycosidic bond dissociation. Thanks to DEA, this process induced by eqf -, in fact, leads to an oxidation of the parent molecule similar to the hydroxyl radical (•OH) leading to the same glycosidic bond (N1-C1') cleavage.

Entities:  

Year:  2020        PMID: 32747845      PMCID: PMC7397759     

Source DB:  PubMed          Journal:  Actual Chim        ISSN: 0151-9093


  19 in total

1.  Resonant formation of DNA strand breaks by low-energy (3 to 20 eV) electrons.

Authors:  B Boudaïffa; P Cloutier; D Hunting; M A Huels; L Sanche
Journal:  Science       Date:  2000-03-03       Impact factor: 47.728

2.  DNA strand breaks induced by 0-4 eV electrons: the role of shape resonances.

Authors:  Frédéric Martin; Paul D Burrow; Zhongli Cai; Pierre Cloutier; Darel Hunting; Léon Sanche
Journal:  Phys Rev Lett       Date:  2004-08-03       Impact factor: 9.161

3.  Bond- and site-selective loss of H atoms from nucleobases by very-low-energy electrons (<3 eV).

Authors:  Sylwia Ptasinska; Stephan Denifl; Paul Scheier; Eugen Illenberger; Tilmann D Märk
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-28       Impact factor: 15.336

4.  Ultrafast Electron Attachment and Hole Transfer Following Ionizing Radiation of Aqueous Uridine Monophosphate.

Authors:  Jun Ma; Sergey A Denisov; Jean-Louis Marignier; Pascal Pernot; Amitava Adhikary; Shu Seki; Mehran Mostafavi
Journal:  J Phys Chem Lett       Date:  2018-08-24       Impact factor: 6.475

5.  Effect of the solvation state of electron in dissociative electron attachment reaction in aqueous solutions.

Authors:  Furong Wang; Pierre Archirel; Yusa Muroya; Shinichi Yamashita; Pascal Pernot; Chengying Yin; Abdel Karim El Omar; Uli Schmidhammer; Jean-Marie Teuler; Mehran Mostafavi
Journal:  Phys Chem Chem Phys       Date:  2017-08-30       Impact factor: 3.676

6.  Gamma and Ion-Beam Irradiation of DNA: Free Radical Mechanisms, Electron Effects, and Radiation Chemical Track Structure.

Authors:  Michael D Sevilla; David Becker; Anil Kumar; Amitava Adhikary
Journal:  Radiat Phys Chem Oxf Engl 1993       Date:  2016-04-30       Impact factor: 2.858

7.  Picosecond Pulse Radiolysis of Highly Concentrated Phosphoric Acid Solutions: Mechanism of Phosphate Radical Formation.

Authors:  Jun Ma; Uli Schmidhammer; Mehran Mostafavi
Journal:  J Phys Chem B       Date:  2014-09-12       Impact factor: 2.991

8.  Protonation of nucleobase anions in gamma-irradiated DNA and model systems. Which DNA base is the ultimate sink for the electron?

Authors:  W Wang; M D Sevilla
Journal:  Radiat Res       Date:  1994-04       Impact factor: 2.841

9.  Reactivity of prehydrated electrons toward nucleobases and nucleotides in aqueous solution.

Authors:  Jun Ma; Furong Wang; Sergey A Denisov; Amitava Adhikary; Mehran Mostafavi
Journal:  Sci Adv       Date:  2017-12-15       Impact factor: 14.136

10.  Observation of dissociative quasi-free electron attachment to nucleoside via excited anion radical in solution.

Authors:  Jun Ma; Anil Kumar; Yusa Muroya; Shinichi Yamashita; Tsuneaki Sakurai; Sergey A Denisov; Michael D Sevilla; Amitava Adhikary; Shu Seki; Mehran Mostafavi
Journal:  Nat Commun       Date:  2019-01-09       Impact factor: 14.919

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  1 in total

1.  A novel approach for the prevention of ionizing radiation-induced bone loss using a designer multifunctional cerium oxide nanozyme.

Authors:  Fei Wei; Craig J Neal; Tamil Selvan Sakthivel; Yifei Fu; Mahmoud Omer; Amitava Adhikary; Samuel Ward; Khoa Minh Ta; Samuel Moxon; Marco Molinari; Jackson Asiatico; Michael Kinzel; Sergey N Yarmolenko; Vee San Cheong; Nina Orlovskaya; Ranajay Ghosh; Sudipta Seal; Melanie Coathup
Journal:  Bioact Mater       Date:  2022-09-21
  1 in total

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