Literature DB >> 27573103

The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol.

Jing Sun1, Jonathan D Todd2, J Cameron Thrash3, Yanping Qian4, Michael C Qian4, Ben Temperton5, Jiazhen Guo6, Emily K Fowler2, Joshua T Aldrich7, Carrie D Nicora7, Mary S Lipton7, Richard D Smith7, Patrick De Leenheer8, Samuel H Payne7, Andrew W B Johnston2, Cleo L Davie-Martin1, Kimberly H Halsey1, Stephen J Giovannoni1.   

Abstract

Marine phytoplankton produce ∼10(9) tonnes of dimethylsulfoniopropionate (DMSP) per year(1,2), an estimated 10% of which is catabolized by bacteria through the DMSP cleavage pathway to the climatically active gas dimethyl sulfide(3,4). SAR11 Alphaproteobacteria (order Pelagibacterales), the most abundant chemo-organotrophic bacteria in the oceans, have been shown to assimilate DMSP into biomass, thereby supplying this cell's unusual requirement for reduced sulfur(5,6). Here, we report that Pelagibacter HTCC1062 produces the gas methanethiol, and that a second DMSP catabolic pathway, mediated by a cupin-like DMSP lyase, DddK, simultaneously shunts as much as 59% of DMSP uptake to dimethyl sulfide production. We propose a model in which the allocation of DMSP between these pathways is kinetically controlled to release increasing amounts of dimethyl sulfide as the supply of DMSP exceeds cellular sulfur demands for biosynthesis.

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Year:  2016        PMID: 27573103     DOI: 10.1038/nmicrobiol.2016.65

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  29 in total

Review 1.  Cupins: the most functionally diverse protein superfamily?

Authors:  Jim M Dunwell; Alan Purvis; Sawsan Khuri
Journal:  Phytochemistry       Date:  2004-01       Impact factor: 4.072

2.  Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.

Authors:  Sarah M Sowell; Larry J Wilhelm; Angela D Norbeck; Mary S Lipton; Carrie D Nicora; Douglas F Barofsky; Craig A Carlson; Richard D Smith; Stephen J Giovanonni
Journal:  ISME J       Date:  2008-09-04       Impact factor: 10.302

3.  Transformation of sulfur compounds by an abundant lineage of marine bacteria in the alpha-subclass of the class Proteobacteria.

Authors:  J M González; R P Kiene; M A Moran
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

4.  An annual cycle of dimethylsulfoniopropionate-sulfur and leucine assimilating bacterioplankton in the coastal NW Mediterranean.

Authors:  Maria Vila-Costa; Jarone Pinhassi; Cecilia Alonso; Jakob Pernthaler; Rafel Simó
Journal:  Environ Microbiol       Date:  2007-10       Impact factor: 5.491

5.  Transcriptional response of Silicibacter pomeroyi DSS-3 to dimethylsulfoniopropionate (DMSP).

Authors:  Helmut Bürgmann; Erinn C Howard; Wenying Ye; Feng Sun; Shulei Sun; Sarah Napierala; Mary Ann Moran
Journal:  Environ Microbiol       Date:  2007-11       Impact factor: 5.491

6.  Molecular genetic analysis of a dimethylsulfoniopropionate lyase that liberates the climate-changing gas dimethylsulfide in several marine alpha-proteobacteria and Rhodobacter sphaeroides.

Authors:  A R J Curson; R Rogers; J D Todd; C A Brearley; A W B Johnston
Journal:  Environ Microbiol       Date:  2008-03       Impact factor: 5.491

7.  SAR11 marine bacteria require exogenous reduced sulphur for growth.

Authors:  H James Tripp; Joshua B Kitner; Michael S Schwalbach; John W H Dacey; Larry J Wilhelm; Stephen J Giovannoni
Journal:  Nature       Date:  2008-03-12       Impact factor: 49.962

8.  Streamlining and core genome conservation among highly divergent members of the SAR11 clade.

Authors:  Jana Grote; J Cameron Thrash; Megan J Huggett; Zachary C Landry; Paul Carini; Stephen J Giovannoni; Michael S Rappé
Journal:  MBio       Date:  2012-09-18       Impact factor: 7.867

9.  One carbon metabolism in SAR11 pelagic marine bacteria.

Authors:  Jing Sun; Laura Steindler; J Cameron Thrash; Kimberly H Halsey; Daniel P Smith; Amy E Carter; Zachary C Landry; Stephen J Giovannoni
Journal:  PLoS One       Date:  2011-08-23       Impact factor: 3.240

10.  The Ruegeria pomeroyi acuI gene has a role in DMSP catabolism and resembles yhdH of E. coli and other bacteria in conferring resistance to acrylate.

Authors:  Jonathan D Todd; Andrew R J Curson; Matthew J Sullivan; Mark Kirkwood; Andrew W B Johnston
Journal:  PLoS One       Date:  2012-04-26       Impact factor: 3.240

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  24 in total

1.  Tritonibacter aquimaris sp. nov. and Tritonibacter litoralis sp. nov., two novel members of the Roseobacter group isolated from coastal seawater.

Authors:  Na Li; Xiao-Yan He; Ning-Hua Liu; Tie-Ji Gu; Jian Li; Yu-Hui Geng; Shan Zhang; Peng Wang; Hui-Hui Fu; Mei Shi; Xiu-Lan Chen; Yu-Zhong Zhang; Xi-Ying Zhang; Qi-Long Qin
Journal:  Antonie Van Leeuwenhoek       Date:  2021-03-29       Impact factor: 2.271

2.  Survey of Bacterial Phylogenetic Diversity During the Glacier Melting Season in an Arctic Fjord.

Authors:  Dukki Han; Tim Richter-Heitmann; Il-Nam Kim; Eunjung Choy; Ki-Tae Park; Tatsuya Unno; Jungman Kim; Seung-Il Nam
Journal:  Microb Ecol       Date:  2020-10-16       Impact factor: 4.552

3.  Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.

Authors:  Ming Peng; Xiu-Lan Chen; Dian Zhang; Xiu-Juan Wang; Ning Wang; Peng Wang; Jonathan D Todd; Yu-Zhong Zhang; Chun-Yang Li
Journal:  Appl Environ Microbiol       Date:  2019-04-04       Impact factor: 4.792

4.  The Microbiological Drivers of Temporally Dynamic Dimethylsulfoniopropionate Cycling Processes in Australian Coastal Shelf Waters.

Authors:  James O'Brien; Erin L McParland; Anna R Bramucci; Martin Ostrowski; Nachshon Siboni; Timothy Ingleton; Mark V Brown; Naomi M Levine; Bonnie Laverock; Katherina Petrou; Justin Seymour
Journal:  Front Microbiol       Date:  2022-06-15       Impact factor: 6.064

5.  Novel Insights into Dimethylsulfoniopropionate Catabolism by Cultivable Bacteria in the Arctic Kongsfjorden.

Authors:  Shan Zhang; Hai-Yan Cao; Nan Zhang; Zhao-Jie Teng; Yang Yu; Zhi-Bin Wang; Peng Wang; Hui-Hui Fu; Xiu-Lan Chen; Yu-Zhong Zhang; Chun-Yang Li
Journal:  Appl Environ Microbiol       Date:  2021-11-17       Impact factor: 5.005

6.  Particulate Metabolites and Transcripts Reflect Diel Oscillations of Microbial Activity in the Surface Ocean.

Authors:  Angela K Boysen; Laura T Carlson; Bryndan P Durham; Ryan D Groussman; Frank O Aylward; François Ribalet; Katherine R Heal; Angelicque E White; Edward F DeLong; E Virginia Armbrust; Anitra E Ingalls
Journal:  mSystems       Date:  2021-05-04       Impact factor: 6.496

7.  Diversity of bacterial dimethylsulfoniopropionate degradation genes in surface seawater of Arctic Kongsfjorden.

Authors:  Yin-Xin Zeng; Zong-Yun Qiao; Yong Yu; Hui-Rong Li; Wei Luo
Journal:  Sci Rep       Date:  2016-09-08       Impact factor: 4.379

8.  Proteome Remodeling in Response to Sulfur Limitation in "Candidatus Pelagibacter ubique".

Authors:  Daniel P Smith; Carrie D Nicora; Paul Carini; Mary S Lipton; Angela D Norbeck; Richard D Smith; Stephen J Giovannoni
Journal:  mSystems       Date:  2016-07-12       Impact factor: 6.496

9.  Sulfide production and oxidation by heterotrophic bacteria under aerobic conditions.

Authors:  Yongzhen Xia; Chuanjuan Lü; Ningke Hou; Yufeng Xin; Jihua Liu; Honglei Liu; Luying Xun
Journal:  ISME J       Date:  2017-08-04       Impact factor: 10.302

Review 10.  Evolution of Dimethylsulfoniopropionate Metabolism in Marine Phytoplankton and Bacteria.

Authors:  Hannah A Bullock; Haiwei Luo; William B Whitman
Journal:  Front Microbiol       Date:  2017-04-19       Impact factor: 5.640

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