Literature DB >> 33067657

Survey of Bacterial Phylogenetic Diversity During the Glacier Melting Season in an Arctic Fjord.

Dukki Han1,2, Tim Richter-Heitmann3, Il-Nam Kim4, Eunjung Choy5, Ki-Tae Park5, Tatsuya Unno6, Jungman Kim7, Seung-Il Nam8.   

Abstract

To understand bacterial biogeography in response to the hydrographic impact of climate change derived from the Arctic glacier melting, we surveyed bacterial diversity and community composition using bacterial 16S rRNA gene metabarcoding in the seawaters of Kongsfjorden, Svalbard, during summer 2016. In the present study, bacterial biogeography in the Kongsfjorden seawaters showed distinct habitat patterns according to water mass classification and habitat transition between Atlantic and fjord surface waters. Moreover, we estimated phylogenetic diversity of bacterial communities using the net relatedness, nearest taxon, and beta nearest taxon indices. We found the influence of freshwater input from glacier melting in shaping bacterial assemblage composition through the stochastic model. We further evaluated bacterial contributions to phytoplankton-derived dimethylsulfoniopropionate (DMSP) using a quantitative PCR (qPCR) measurement with demethylation (dmdA) and cleavage (dddP) genes of two fundamentally different processes. Our qPCR results imply that bacterial DMSP degradation follows the Atlantic inflow during summer in Kongsfjorden. These findings suggest that the Atlantic inflow and glacial melting influence bacterial community composition and assembly processes and thus affect the degradation of phytoplankton-derived organic matter in an Arctic fjord.

Entities:  

Keywords:  Arctic glacial fjord; Bacterial biogeography; Kongsfjorden; Phytoplankton-derived organic matter; SAR11; Stochastic-deterministic balance

Year:  2020        PMID: 33067657     DOI: 10.1007/s00248-020-01616-4

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  33 in total

1.  Stochastic and deterministic assembly processes in subsurface microbial communities.

Authors:  James C Stegen; Xueju Lin; Allan E Konopka; James K Fredrickson
Journal:  ISME J       Date:  2012-03-29       Impact factor: 10.302

2.  Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession.

Authors:  Francisco Dini-Andreote; James C Stegen; Jan Dirk van Elsas; Joana Falcão Salles
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-02       Impact factor: 11.205

3.  Two key features influencing community assembly processes at regional scale: Initial state and degree of change in environmental conditions.

Authors:  Youzhi Feng; Ruirui Chen; James C Stegen; Zhiying Guo; Jianwei Zhang; Zhongpei Li; Xiangui Lin
Journal:  Mol Ecol       Date:  2018-11-25       Impact factor: 6.185

4.  Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes.

Authors:  Jianjun Wang; Ji Shen; Yucheng Wu; Chen Tu; Janne Soininen; James C Stegen; Jizheng He; Xingqi Liu; Lu Zhang; Enlou Zhang
Journal:  ISME J       Date:  2013-02-28       Impact factor: 10.302

Review 5.  Master recyclers: features and functions of bacteria associated with phytoplankton blooms.

Authors:  Alison Buchan; Gary R LeCleir; Christopher A Gulvik; José M González
Journal:  Nat Rev Microbiol       Date:  2014-08-19       Impact factor: 60.633

6.  Response of bacterial communities from Kongsfjorden (Svalbard, Arctic Ocean) to macroalgal polysaccharide amendments.

Authors:  Anand Jain; Kottekkatu Padinchati Krishnan; Nazira Begum; Archana Singh; Femi Anna Thomas; Anu Gopinath
Journal:  Mar Environ Res       Date:  2020-01-13       Impact factor: 3.130

Review 7.  Mini-review: Phytoplankton-derived polysaccharides in the marine environment and their interactions with heterotrophic bacteria.

Authors:  Marco Mühlenbruch; Hans-Peter Grossart; Falk Eigemann; Maren Voss
Journal:  Environ Microbiol       Date:  2018-09-09       Impact factor: 5.491

8.  Estimating and mapping ecological processes influencing microbial community assembly.

Authors:  James C Stegen; Xueju Lin; Jim K Fredrickson; Allan E Konopka
Journal:  Front Microbiol       Date:  2015-05-01       Impact factor: 5.640

9.  The epsomitic phototrophic microbial mat of Hot Lake, Washington: community structural responses to seasonal cycling.

Authors:  Stephen R Lindemann; James J Moran; James C Stegen; Ryan S Renslow; Janine R Hutchison; Jessica K Cole; Alice C Dohnalkova; Julien Tremblay; Kanwar Singh; Stephanie A Malfatti; Feng Chen; Susannah G Tringe; Haluk Beyenal; James K Fredrickson
Journal:  Front Microbiol       Date:  2013-11-13       Impact factor: 5.640

10.  Soil pH mediates the balance between stochastic and deterministic assembly of bacteria.

Authors:  Binu M Tripathi; James C Stegen; Mincheol Kim; Ke Dong; Jonathan M Adams; Yoo Kyung Lee
Journal:  ISME J       Date:  2018-03-07       Impact factor: 10.302

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  2 in total

1.  Contrasting assembly mechanisms and drivers of soil rare and abundant bacterial communities in 22-year continuous and non-continuous cropping systems.

Authors:  Yan Su; Yanxia Hu; Haiyun Zi; Yi Chen; Xiaopeng Deng; Binbin Hu; Yonglei Jiang
Journal:  Sci Rep       Date:  2022-02-28       Impact factor: 4.379

2.  Phylogenetic diversity and spatiotemporal dynamics of bacterial and microeukaryotic plankton communities in Gwangyang Bay of the Korean Peninsula.

Authors:  Dukki Han; Hanseob Shin; Ji-Hoon Lee; Chang-Keun Kang; Dong-Gyun Kim; Hor-Gil Hur
Journal:  Sci Rep       Date:  2022-02-22       Impact factor: 4.379

  2 in total

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