Literature DB >> 27572161

Re-examination of the relationship between marine virus and microbial cell abundances.

Charles H Wigington1, Derek Sonderegger2, Corina P D Brussaard3,4, Alison Buchan5, Jan F Finke6, Jed A Fuhrman7, Jay T Lennon8, Mathias Middelboe9, Curtis A Suttle6,10,11,12, Charles Stock13, William H Wilson14, K Eric Wommack15, Steven W Wilhelm5, Joshua S Weitz1,16.   

Abstract

Marine viruses are critical drivers of ocean biogeochemistry, and their abundances vary spatiotemporally in the global oceans, with upper estimates exceeding 10(8) per ml. Over many years, a consensus has emerged that virus abundances are typically tenfold higher than microbial cell abundances. However, the true explanatory power of a linear relationship and its robustness across diverse ocean environments is unclear. Here, we compile 5,671 microbial cell and virus abundance estimates from 25 distinct marine surveys and find substantial variation in the virus-to-microbial cell ratio, in which a 10:1 model has either limited or no explanatory power. Instead, virus abundances are better described as nonlinear, power-law functions of microbial cell abundances. The fitted scaling exponents are typically less than 1, implying that the virus-to-microbial cell ratio decreases with microbial cell density, rather than remaining fixed. The observed scaling also implies that viral effect sizes derived from 'representative' abundances require substantial refinement to be extrapolated to regional or global scales.

Mesh:

Year:  2016        PMID: 27572161     DOI: 10.1038/nmicrobiol.2015.24

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  28 in total

1.  Production of viruses during a spring phytoplankton bloom in the South Pacific Ocean near of New Zealand.

Authors:  Audrey R Matteson; Star N Loar; Stuart Pickmere; Jennifer M DeBruyn; Michael J Ellwood; Philip W Boyd; David A Hutchins; Steven W Wilhelm
Journal:  FEMS Microbiol Ecol       Date:  2011-12-06       Impact factor: 4.194

2.  The predator-prey power law: Biomass scaling across terrestrial and aquatic biomes.

Authors:  Ian A Hatton; Kevin S McCann; John M Fryxell; T Jonathan Davies; Matteo Smerlak; Anthony R E Sinclair; Michel Loreau
Journal:  Science       Date:  2015-09-03       Impact factor: 47.728

3.  Annually reoccurring bacterial communities are predictable from ocean conditions.

Authors:  Jed A Fuhrman; Ian Hewson; Michael S Schwalbach; Joshua A Steele; Mark V Brown; Shahid Naeem
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-22       Impact factor: 11.205

Review 4.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

5.  Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea.

Authors:  Rachel J Parsons; Mya Breitbart; Michael W Lomas; Craig A Carlson
Journal:  ISME J       Date:  2011-08-11       Impact factor: 10.302

6.  The elemental composition of virus particles: implications for marine biogeochemical cycles.

Authors:  Luis F Jover; T Chad Effler; Alison Buchan; Steven W Wilhelm; Joshua S Weitz
Journal:  Nat Rev Microbiol       Date:  2014-07       Impact factor: 60.633

7.  High abundance of viruses found in aquatic environments.

Authors:  O Bergh; K Y Børsheim; G Bratbak; M Heldal
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

8.  Coevolutionary arms races between bacteria and bacteriophage.

Authors:  J S Weitz; H Hartman; S A Levin
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-23       Impact factor: 11.205

9.  Virus-host swinging party in the oceans: Incorporating biological complexity into paradigms of antagonistic coexistence.

Authors:  Sarit Avrani; Daniel A Schwartz; Debbie Lindell
Journal:  Mob Genet Elements       Date:  2012-03-01

10.  Viruses' life history: towards a mechanistic basis of a trade-off between survival and reproduction among phages.

Authors:  Marianne De Paepe; François Taddei
Journal:  PLoS Biol       Date:  2006-07       Impact factor: 8.029

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  76 in total

1.  Membrane vesicles in sea water: heterogeneous DNA content and implications for viral abundance estimates.

Authors:  Steven J Biller; Lauren D McDaniel; Mya Breitbart; Everett Rogers; John H Paul; Sallie W Chisholm
Journal:  ISME J       Date:  2016-11-08       Impact factor: 10.302

Review 2.  The impact of quorum sensing on the modulation of phage-host interactions.

Authors:  Josefina León-Félix; Claudia Villicaña
Journal:  J Bacteriol       Date:  2021-01-19       Impact factor: 3.490

3.  Seasonal and diel patterns of abundance and activity of viruses in the Red Sea.

Authors:  Gur Hevroni; José Flores-Uribe; Oded Béjà; Alon Philosof
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-10       Impact factor: 11.205

Review 4.  Virus-host interactions and their roles in coral reef health and disease.

Authors:  Rebecca Vega Thurber; Jérôme P Payet; Andrew R Thurber; Adrienne M S Correa
Journal:  Nat Rev Microbiol       Date:  2017-01-16       Impact factor: 60.633

5.  Consensus statement: Virus taxonomy in the age of metagenomics.

Authors:  Peter Simmonds; Mike J Adams; Mária Benkő; Mya Breitbart; J Rodney Brister; Eric B Carstens; Andrew J Davison; Eric Delwart; Alexander E Gorbalenya; Balázs Harrach; Roger Hull; Andrew M Q King; Eugene V Koonin; Mart Krupovic; Jens H Kuhn; Elliot J Lefkowitz; Max L Nibert; Richard Orton; Marilyn J Roossinck; Sead Sabanadzovic; Matthew B Sullivan; Curtis A Suttle; Robert B Tesh; René A van der Vlugt; Arvind Varsani; F Murilo Zerbini
Journal:  Nat Rev Microbiol       Date:  2017-01-03       Impact factor: 60.633

6.  Don't wait to share data on Zika.

Authors: 
Journal:  Nat Microbiol       Date:  2016-02-15       Impact factor: 17.745

7.  Lysis, lysogeny and virus-microbe ratios.

Authors:  Joshua S Weitz; Stephen J Beckett; Jennifer R Brum; B B Cael; Jonathan Dushoff
Journal:  Nature       Date:  2017-09-20       Impact factor: 49.962

8.  Salinity Drives the Virioplankton Abundance but Not Production in Tropical Coastal Lagoons.

Authors:  Pedro C Junger; André M Amado; Rodolfo Paranhos; Anderson S Cabral; Saulo M S Jacques; Vinicius F Farjalla
Journal:  Microb Ecol       Date:  2017-07-18       Impact factor: 4.552

9.  Deposition rates of viruses and bacteria above the atmospheric boundary layer.

Authors:  Isabel Reche; Gaetano D'Orta; Natalie Mladenov; Danielle M Winget; Curtis A Suttle
Journal:  ISME J       Date:  2018-01-29       Impact factor: 10.302

10.  Size-dependent Catalysis of Chlorovirus Population Growth by A Messy Feeding Predator.

Authors:  John P DeLong; Zeina Al-Ameeli; Shelby Lyon; James L Van Etten; David D Dunigan
Journal:  Microb Ecol       Date:  2017-11-08       Impact factor: 4.552

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