Literature DB >> 24931044

The elemental composition of virus particles: implications for marine biogeochemical cycles.

Luis F Jover1, T Chad Effler2, Alison Buchan2, Steven W Wilhelm2, Joshua S Weitz3.   

Abstract

In marine environments, virus-mediated lysis of host cells leads to the release of cellular carbon and nutrients and is hypothesized to be a major driver of carbon recycling on a global scale. However, efforts to characterize the effects of viruses on nutrient cycles have overlooked the geochemical potential of the virus particles themselves, particularly with respect to their phosphorus content. In this Analysis article, we use a biophysical scaling model of intact virus particles that has been validated using sequence and structural information to quantify differences in the elemental stoichiometry of marine viruses compared with their microbial hosts. By extrapolating particle-scale estimates to the ecosystem scale, we propose that, under certain circumstances, marine virus populations could make an important contribution to the reservoir and cycling of oceanic phosphorus.

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Year:  2014        PMID: 24931044     DOI: 10.1038/nrmicro3289

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  39 in total

1.  Production of viruses during a spring phytoplankton bloom in the South Pacific Ocean near of New Zealand.

Authors:  Audrey R Matteson; Star N Loar; Stuart Pickmere; Jennifer M DeBruyn; Michael J Ellwood; Philip W Boyd; David A Hutchins; Steven W Wilhelm
Journal:  FEMS Microbiol Ecol       Date:  2011-12-06       Impact factor: 4.194

2.  Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.

Authors:  Alina Ionel; Javier A Velázquez-Muriel; Daniel Luque; Ana Cuervo; José R Castón; José M Valpuesta; Jaime Martín-Benito; José L Carrascosa
Journal:  J Biol Chem       Date:  2010-10-20       Impact factor: 5.157

3.  Photosynthesis genes in marine viruses yield proteins during host infection.

Authors:  Debbie Lindell; Jacob D Jaffe; Zackary I Johnson; George M Church; Sallie W Chisholm
Journal:  Nature       Date:  2005-10-12       Impact factor: 49.962

4.  Constituents of SH1, a novel lipid-containing virus infecting the halophilic euryarchaeon Haloarcula hispanica.

Authors:  Dennis H Bamford; Janne J Ravantti; Gunilla Rönnholm; Simonas Laurinavicius; Petra Kukkaro; Mike Dyall-Smith; Pentti Somerharju; Nisse Kalkkinen; Jaana K H Bamford
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

5.  Assembly of a tailed bacterial virus and its genome release studied in three dimensions.

Authors:  Y Tao; N H Olson; W Xu; D L Anderson; M G Rossmann; T S Baker
Journal:  Cell       Date:  1998-10-30       Impact factor: 41.582

6.  Genome sequence, structural proteins, and capsid organization of the cyanophage Syn5: a "horned" bacteriophage of marine synechococcus.

Authors:  Welkin H Pope; Peter R Weigele; Juan Chang; Marisa L Pedulla; Michael E Ford; Jennifer M Houtz; Wen Jiang; Wah Chiu; Graham F Hatfull; Roger W Hendrix; Jonathan King
Journal:  J Mol Biol       Date:  2007-02-22       Impact factor: 5.469

7.  Viral-mediated lysis of microbes and carbon release in the sub-Antarctic and Polar Frontal zones of the Australian Southern Ocean.

Authors:  Claire Evans; Imojen Pearce; Corina P D Brussaard
Journal:  Environ Microbiol       Date:  2009-09-16       Impact factor: 5.491

Review 8.  Structure and morphogenesis of bacteriophage T4.

Authors:  P G Leiman; S Kanamaru; V V Mesyanzhinov; F Arisaka; M G Rossmann
Journal:  Cell Mol Life Sci       Date:  2003-11       Impact factor: 9.261

9.  Ocean viruses and their effects on microbial communities and biogeochemical cycles.

Authors:  Joshua S Weitz; Steven W Wilhelm
Journal:  F1000 Biol Rep       Date:  2012-09-05

10.  The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples.

Authors:  Shannon J Williamson; Douglas B Rusch; Shibu Yooseph; Aaron L Halpern; Karla B Heidelberg; John I Glass; Cynthia Andrews-Pfannkoch; Douglas Fadrosh; Christopher S Miller; Granger Sutton; Marvin Frazier; J Craig Venter
Journal:  PLoS One       Date:  2008-01-23       Impact factor: 3.240

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  83 in total

Review 1.  Microbial Surface Colonization and Biofilm Development in Marine Environments.

Authors:  Hongyue Dang; Charles R Lovell
Journal:  Microbiol Mol Biol Rev       Date:  2015-12-23       Impact factor: 11.056

2.  Phage infection of an environmentally relevant marine bacterium alters host metabolism and lysate composition.

Authors:  Nana Yaw D Ankrah; Amanda L May; Jesse L Middleton; Daniel R Jones; Mary K Hadden; Jessica R Gooding; Gary R LeCleir; Steven W Wilhelm; Shawn R Campagna; Alison Buchan
Journal:  ISME J       Date:  2013-12-05       Impact factor: 10.302

3.  Virus decomposition provides an important contribution to benthic deep-sea ecosystem functioning.

Authors:  Antonio Dell'Anno; Cinzia Corinaldesi; Roberto Danovaro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

4.  The fate and biogeochemical cycling of viral elements.

Authors:  Rui Zhang; Wei Wei; Lanlan Cai
Journal:  Nat Rev Microbiol       Date:  2014-12       Impact factor: 60.633

5.  A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes.

Authors:  Joshua S Weitz; Charles A Stock; Steven W Wilhelm; Lydia Bourouiba; Maureen L Coleman; Alison Buchan; Michael J Follows; Jed A Fuhrman; Luis F Jover; Jay T Lennon; Mathias Middelboe; Derek L Sonderegger; Curtis A Suttle; Bradford P Taylor; T Frede Thingstad; William H Wilson; K Eric Wommack
Journal:  ISME J       Date:  2015-01-30       Impact factor: 10.302

6.  Membrane vesicles in sea water: heterogeneous DNA content and implications for viral abundance estimates.

Authors:  Steven J Biller; Lauren D McDaniel; Mya Breitbart; Everett Rogers; John H Paul; Sallie W Chisholm
Journal:  ISME J       Date:  2016-11-08       Impact factor: 10.302

7.  Seasonal and diel patterns of abundance and activity of viruses in the Red Sea.

Authors:  Gur Hevroni; José Flores-Uribe; Oded Béjà; Alon Philosof
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-10       Impact factor: 11.205

8.  Diversity of Active Viral Infections within the Sphagnum Microbiome.

Authors:  Joshua M A Stough; Max Kolton; Joel E Kostka; David J Weston; Dale A Pelletier; Steven W Wilhelm
Journal:  Appl Environ Microbiol       Date:  2018-11-15       Impact factor: 4.792

9.  Re-examination of the relationship between marine virus and microbial cell abundances.

Authors:  Charles H Wigington; Derek Sonderegger; Corina P D Brussaard; Alison Buchan; Jan F Finke; Jed A Fuhrman; Jay T Lennon; Mathias Middelboe; Curtis A Suttle; Charles Stock; William H Wilson; K Eric Wommack; Steven W Wilhelm; Joshua S Weitz
Journal:  Nat Microbiol       Date:  2016-01-25       Impact factor: 17.745

10.  Energetic cost of building a virus.

Authors:  Gita Mahmoudabadi; Ron Milo; Rob Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-16       Impact factor: 11.205

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