Literature DB >> 21833038

Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea.

Rachel J Parsons1, Mya Breitbart, Michael W Lomas, Craig A Carlson.   

Abstract

There are an estimated 10(30) virioplankton in the world oceans, the majority of which are phages (viruses that infect bacteria). Marine phages encompass enormous genetic diversity, affect biogeochemical cycling of elements, and partially control aspects of prokaryotic production and diversity. Despite their importance, there is a paucity of data describing virioplankton distributions over time and depth in oceanic systems. A decade of high-resolution time-series data collected from the upper 300 m in the northwestern Sargasso Sea revealed recurring temporal and vertical patterns of virioplankton abundance in unprecedented detail. An annual virioplankton maximum developed between 60 and 100 m during periods of summer stratification and eroded during winter convective mixing. The timing and vertical positioning of this seasonal pattern was related to variability in water column stability and the dynamics of specific picophytoplankton and heterotrophic bacterioplankton lineages. Between 60 and 100 m, virioplankton abundance was negatively correlated to the dominant heterotrophic bacterioplankton lineage SAR11, as well as the less abundant picophytoplankton, Synechococcus. In contrast, virioplankton abundance was positively correlated to the dominant picophytoplankton lineage Prochlorococcus, and the less abundant alpha-proteobacteria, Rhodobacteraceae. Seasonally, virioplankton abundances were highly synchronous with Prochlorococcus distributions and the virioplankton to Prochlorococcus ratio remained remarkably constant during periods of water column stratification. The data suggest that a significant fraction of viruses in the mid-euphotic zone of the subtropical gyres may be cyanophages and patterns in their abundance are largely determined by Prochlorococcus dynamics in response to water column stability. This high-resolution, decadal survey of virioplankton abundance provides insight into the possible controls of virioplankton dynamics in the open ocean.

Entities:  

Mesh:

Year:  2011        PMID: 21833038      PMCID: PMC3260494          DOI: 10.1038/ismej.2011.101

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  33 in total

1.  Resistance to co-occurring phages enables marine synechococcus communities to coexist with cyanophages abundant in seawater.

Authors:  J B Waterbury; F W Valois
Journal:  Appl Environ Microbiol       Date:  1993-10       Impact factor: 4.792

2.  Functional metagenomic profiling of nine biomes.

Authors:  Elizabeth A Dinsdale; Robert A Edwards; Dana Hall; Florent Angly; Mya Breitbart; Jennifer M Brulc; Mike Furlan; Christelle Desnues; Matthew Haynes; Linlin Li; Lauren McDaniel; Mary Ann Moran; Karen E Nelson; Christina Nilsson; Robert Olson; John Paul; Beltran Rodriguez Brito; Yijun Ruan; Brandon K Swan; Rick Stevens; David L Valentine; Rebecca Vega Thurber; Linda Wegley; Bryan A White; Forest Rohwer
Journal:  Nature       Date:  2008-03-12       Impact factor: 49.962

Review 3.  Marine viruses--major players in the global ecosystem.

Authors:  Curtis A Suttle
Journal:  Nat Rev Microbiol       Date:  2007-10       Impact factor: 60.633

4.  The significance of viruses to mortality in aquatic microbial communities.

Authors:  C A Suttle
Journal:  Microb Ecol       Date:  1994-09       Impact factor: 4.552

5.  Mechanisms and rates of decay of marine viruses in seawater.

Authors:  C A Suttle; F Chen
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

6.  High abundance of viruses found in aquatic environments.

Authors:  O Bergh; K Y Børsheim; G Bratbak; M Heldal
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

7.  Effects of sunlight on bacteriophage viability and structure.

Authors:  K E Wommack; R T Hill; T A Muller; R R Colwell
Journal:  Appl Environ Microbiol       Date:  1996-04       Impact factor: 4.792

8.  Accurate estimation of viral abundance by epifluorescence microscopy.

Authors:  Kevin Wen; Alice C Ortmann; Curtis A Suttle
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

9.  Genetic diversity in Sargasso Sea bacterioplankton.

Authors:  S J Giovannoni; T B Britschgi; C L Moyer; K G Field
Journal:  Nature       Date:  1990-05-03       Impact factor: 49.962

10.  The marine viromes of four oceanic regions.

Authors:  Florent E Angly; Ben Felts; Mya Breitbart; Peter Salamon; Robert A Edwards; Craig Carlson; Amy M Chan; Matthew Haynes; Scott Kelley; Hong Liu; Joseph M Mahaffy; Jennifer E Mueller; Jim Nulton; Robert Olson; Rachel Parsons; Steve Rayhawk; Curtis A Suttle; Forest Rohwer
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

View more
  50 in total

1.  Dynamic viral populations in hypersaline systems as revealed by metagenomic assembly.

Authors:  Joanne B Emerson; Brian C Thomas; Karen Andrade; Eric E Allen; Karla B Heidelberg; Jillian F Banfield
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

2.  Temporal dynamics and decay of putatively allochthonous and autochthonous viral genotypes in contrasting freshwater lakes.

Authors:  Ian Hewson; Jorge G Barbosa; Julia M Brown; Ryan P Donelan; James B Eaglesham; Erin M Eggleston; Brenna A LaBarre
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

3.  The perils of pathogen discovery: origin of a novel parvovirus-like hybrid genome traced to nucleic acid extraction spin columns.

Authors:  Samia N Naccache; Alexander L Greninger; Deanna Lee; Lark L Coffey; Tung Phan; Annie Rein-Weston; Andrew Aronsohn; John Hackett; Eric L Delwart; Charles Y Chiu
Journal:  J Virol       Date:  2013-09-11       Impact factor: 5.103

4.  Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight.

Authors:  Cheryl-Emiliane T Chow; Rohan Sachdeva; Jacob A Cram; Joshua A Steele; David M Needham; Anand Patel; Alma E Parada; Jed A Fuhrman
Journal:  ISME J       Date:  2013-07-18       Impact factor: 10.302

5.  Strong seasonality and interannual recurrence in marine myovirus communities.

Authors:  A Pagarete; C-E T Chow; T Johannessen; J A Fuhrman; T F Thingstad; R A Sandaa
Journal:  Appl Environ Microbiol       Date:  2013-08-02       Impact factor: 4.792

6.  Metabolic cascades in marine microbial communities.

Authors:  Andreas F Haas; Forest Rohwer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

Review 7.  Prochlorococcus: the structure and function of collective diversity.

Authors:  Steven J Biller; Paul M Berube; Debbie Lindell; Sallie W Chisholm
Journal:  Nat Rev Microbiol       Date:  2014-12-01       Impact factor: 60.633

Review 8.  Marine microbial community dynamics and their ecological interpretation.

Authors:  Jed A Fuhrman; Jacob A Cram; David M Needham
Journal:  Nat Rev Microbiol       Date:  2015-02-09       Impact factor: 60.633

Review 9.  Rising to the challenge: accelerated pace of discovery transforms marine virology.

Authors:  Jennifer R Brum; Matthew B Sullivan
Journal:  Nat Rev Microbiol       Date:  2015-02-02       Impact factor: 60.633

10.  Membrane vesicles in sea water: heterogeneous DNA content and implications for viral abundance estimates.

Authors:  Steven J Biller; Lauren D McDaniel; Mya Breitbart; Everett Rogers; John H Paul; Sallie W Chisholm
Journal:  ISME J       Date:  2016-11-08       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.