| Literature DB >> 27536393 |
Mouhamadou Birame Diop1, Libasse Diop1, Laurent Plasseraud2, Hélène Cattey2.
Abstract
Single crystals of the title mol-ecular salt, C4H7N2 (+)·HC2O4 (-)·2H2O, were isolated from the reaction of 2-methyl-1H-imidazole and oxalic acid in a 1:1 molar ratio in water. In the crystal, the cations and anions are positioned alternately along an infinite [010] ribbon and linked together through bifurcated N-H⋯(O,O) hydrogen bonds. The water mol-ecules of crystallization link the chains into (10-1) bilayers, with the methyl groups of the cations organized in an isotactic manner.Entities:
Keywords: crystal structure; hydrogen bonds; hydrogen oxalate; monosubstituted imidazolium; organic salt
Year: 2016 PMID: 27536393 PMCID: PMC4971852 DOI: 10.1107/S2056989016011038
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of (I), showing the atom labelling. Displacement ellipsoids are draw at the 50% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O3 | 0.88 | 1.94 | 2.811 (2) | 172 |
| N1—H1⋯O1 | 0.88 | 2.50 | 2.991 (2) | 116 |
| N2—H2⋯O4i | 0.88 | 1.97 | 2.842 (2) | 169 |
| N2—H2⋯O2i | 0.88 | 2.49 | 2.977 (2) | 116 |
| O1—H1 | 0.84 | 1.69 | 2.5234 (19) | 169 |
| O6—H6 | 0.85 | 2.02 | 2.7893 (19) | 150 |
| O6—H6 | 0.85 | 1.87 | 2.700 (2) | 166 |
| O5—H5 | 0.85 | 1.82 | 2.672 (2) | 176 |
| O5—H5 | 0.85 | 1.88 | 2.720 (2) | 167 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .
Figure 2The crystal packing of the title salt, showing a two-dimensional bilayer-like arrangement through N—H⋯(O,O) and O—H⋯O interactions. H atoms not involved in hydrogen bonding have been omitted for clarity. Colour code: C dark grey, H light grey, O red and N blue.
Experimental details
| Crystal data | |
| Chemical formula | C4H7N2 +·C2HO4 −·2H2O |
|
| 208.18 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 115 |
|
| 6.7139 (7), 9.5116 (7), 15.2115 (13) |
| β (°) | 101.151 (6) |
|
| 953.07 (15) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.13 |
| Crystal size (mm) | 0.30 × 0.10 × 0.08 |
| Data collection | |
| Diffractometer | Bruker APEXII CCD |
| Absorption correction | Multi-scan ( |
|
| 0.691, 0.746 |
| No. of measured, independent and observed [ | 15445, 2187, 1258 |
|
| 0.063 |
| (sin θ/λ)max (Å−1) | 0.650 |
| Refinement | |
|
| 0.043, 0.115, 1.01 |
| No. of reflections | 2187 |
| No. of parameters | 135 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.40, −0.23 |
Computer programs: APEX2 and SAINT (Bruker, 2013 ▸), SHELXS2013 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| C4H7N2+·C2HO4−·2H2O | |
| Monoclinic, | Mo |
| Cell parameters from 2578 reflections | |
| θ = 3.5–26.4° | |
| µ = 0.13 mm−1 | |
| β = 101.151 (6)° | |
| Needle, colourless | |
| 0.30 × 0.10 × 0.08 mm |
| Bruker APEXII CCD diffractometer | 2187 independent reflections |
| Radiation source: X-ray tube, Siemens KFF Mo 2K-90C | 1258 reflections with |
| TRIUMPH curved crystal monochromator | |
| Detector resolution: 1024 x 1024 pixels mm-1 | θmax = 27.5°, θmin = 2.5° |
| φ and ω scans' | |
| Absorption correction: multi-scan SADABS (Bruker, 2014) was used for absorption correction. wR2(int) was 0.0622 before and 0.0548 after correction. The Ratio of minimum to maximum transmission is 0.9269. The λ/2 correction factor is 0.00150. | |
| 15445 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2187 reflections | Δρmax = 0.40 e Å−3 |
| 135 parameters | Δρmin = −0.23 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| O4 | 0.3344 (2) | 0.84241 (13) | 0.62704 (8) | 0.0224 (3) | |
| O3 | 0.3377 (2) | 0.60714 (13) | 0.62300 (9) | 0.0247 (3) | |
| O1 | 0.1928 (2) | 0.60978 (13) | 0.44891 (9) | 0.0254 (4) | |
| H1A | 0.1572 | 0.6196 | 0.3932 | 0.038* | |
| O6 | 0.3979 (2) | 0.45757 (14) | 0.22494 (10) | 0.0314 (4) | |
| H6A | 0.3724 | 0.3954 | 0.1842 | 0.047* | |
| H6B | 0.4883 | 0.4270 | 0.2677 | 0.047* | |
| O2 | 0.2253 (2) | 0.84212 (14) | 0.44546 (9) | 0.0311 (4) | |
| O5 | 0.1121 (3) | 0.61142 (17) | 0.27986 (9) | 0.0357 (4) | |
| H5A | 0.1986 | 0.5615 | 0.2599 | 0.054* | |
| H5B | 0.0183 | 0.6360 | 0.2367 | 0.054* | |
| N2 | 0.2719 (2) | 0.11229 (16) | 0.54620 (11) | 0.0231 (4) | |
| H2 | 0.2824 | 0.0244 | 0.5647 | 0.028* | |
| N1 | 0.2803 (2) | 0.33729 (17) | 0.54697 (11) | 0.0245 (4) | |
| H1 | 0.2970 | 0.4248 | 0.5657 | 0.029* | |
| C5 | 0.3089 (3) | 0.7264 (2) | 0.58854 (12) | 0.0186 (4) | |
| C6 | 0.2361 (3) | 0.7327 (2) | 0.48607 (12) | 0.0187 (4) | |
| C1 | 0.3139 (3) | 0.2239 (2) | 0.59833 (14) | 0.0244 (5) | |
| C2 | 0.2138 (3) | 0.2951 (2) | 0.45809 (14) | 0.0287 (5) | |
| H2A | 0.1789 | 0.3549 | 0.4074 | 0.034* | |
| C4 | 0.3880 (3) | 0.2233 (2) | 0.69571 (13) | 0.0291 (5) | |
| H4A | 0.3300 | 0.1428 | 0.7222 | 0.044* | |
| H4B | 0.3472 | 0.3106 | 0.7215 | 0.044* | |
| H4C | 0.5364 | 0.2160 | 0.7085 | 0.044* | |
| C3 | 0.2088 (3) | 0.1547 (2) | 0.45810 (14) | 0.0296 (5) | |
| H3 | 0.1696 | 0.0954 | 0.4075 | 0.036* |
| O4 | 0.0311 (8) | 0.0146 (7) | 0.0198 (7) | −0.0010 (6) | 0.0005 (6) | −0.0023 (6) |
| O3 | 0.0375 (9) | 0.0141 (7) | 0.0196 (7) | 0.0018 (6) | −0.0018 (6) | 0.0018 (6) |
| O1 | 0.0417 (10) | 0.0159 (7) | 0.0160 (7) | −0.0014 (6) | −0.0010 (7) | −0.0013 (5) |
| O6 | 0.0439 (11) | 0.0223 (8) | 0.0224 (8) | 0.0083 (7) | −0.0075 (7) | −0.0045 (6) |
| O2 | 0.0568 (11) | 0.0135 (7) | 0.0203 (8) | −0.0004 (7) | 0.0009 (7) | 0.0024 (6) |
| O5 | 0.0412 (11) | 0.0421 (10) | 0.0201 (8) | 0.0125 (8) | −0.0030 (7) | −0.0046 (7) |
| N2 | 0.0282 (10) | 0.0116 (8) | 0.0285 (10) | −0.0004 (7) | 0.0026 (8) | 0.0012 (7) |
| N1 | 0.0280 (10) | 0.0128 (8) | 0.0322 (10) | 0.0004 (7) | 0.0043 (8) | −0.0006 (7) |
| C5 | 0.0192 (11) | 0.0153 (9) | 0.0200 (10) | 0.0020 (8) | 0.0010 (8) | 0.0006 (8) |
| C6 | 0.0198 (10) | 0.0145 (9) | 0.0209 (10) | 0.0008 (8) | 0.0016 (8) | −0.0011 (8) |
| C1 | 0.0218 (11) | 0.0178 (9) | 0.0332 (12) | 0.0000 (9) | 0.0047 (9) | −0.0005 (9) |
| C2 | 0.0363 (13) | 0.0221 (11) | 0.0265 (11) | 0.0009 (10) | 0.0029 (10) | 0.0007 (9) |
| C4 | 0.0348 (13) | 0.0238 (10) | 0.0282 (11) | −0.0002 (10) | 0.0053 (10) | −0.0016 (9) |
| C3 | 0.0395 (14) | 0.0205 (11) | 0.0276 (12) | −0.0001 (10) | 0.0033 (10) | −0.0028 (9) |
| O4—C5 | 1.245 (2) | N1—H1 | 0.8800 |
| O3—C5 | 1.249 (2) | N1—C1 | 1.325 (3) |
| O1—H1A | 0.8400 | N1—C2 | 1.398 (2) |
| O1—C6 | 1.306 (2) | C5—C6 | 1.542 (3) |
| O6—H6A | 0.8499 | C1—C4 | 1.469 (3) |
| O6—H6B | 0.8501 | C2—H2A | 0.9500 |
| O2—C6 | 1.206 (2) | C2—C3 | 1.336 (3) |
| O5—H5A | 0.8500 | C4—H4A | 0.9800 |
| O5—H5B | 0.8500 | C4—H4B | 0.9800 |
| N2—H2 | 0.8800 | C4—H4C | 0.9800 |
| N2—C1 | 1.323 (2) | C3—H3 | 0.9500 |
| N2—C3 | 1.385 (2) | ||
| C6—O1—H1A | 109.5 | N2—C1—N1 | 107.91 (17) |
| H6A—O6—H6B | 109.5 | N2—C1—C4 | 126.36 (18) |
| H5A—O5—H5B | 109.5 | N1—C1—C4 | 125.72 (18) |
| C1—N2—H2 | 125.2 | N1—C2—H2A | 126.6 |
| C1—N2—C3 | 109.64 (16) | C3—C2—N1 | 106.85 (18) |
| C3—N2—H2 | 125.2 | C3—C2—H2A | 126.6 |
| C1—N1—H1 | 125.6 | C1—C4—H4A | 109.5 |
| C1—N1—C2 | 108.83 (16) | C1—C4—H4B | 109.5 |
| C2—N1—H1 | 125.6 | C1—C4—H4C | 109.5 |
| O4—C5—O3 | 127.68 (17) | H4A—C4—H4B | 109.5 |
| O4—C5—C6 | 115.41 (16) | H4A—C4—H4C | 109.5 |
| O3—C5—C6 | 116.90 (17) | H4B—C4—H4C | 109.5 |
| O1—C6—C5 | 113.79 (16) | N2—C3—H3 | 126.6 |
| O2—C6—O1 | 124.38 (17) | C2—C3—N2 | 106.76 (18) |
| O2—C6—C5 | 121.81 (18) | C2—C3—H3 | 126.6 |
| O4—C5—C6—O1 | −173.95 (17) | C1—N1—C2—C3 | 0.0 (2) |
| O4—C5—C6—O2 | 7.3 (3) | C2—N1—C1—N2 | 0.0 (2) |
| O3—C5—C6—O1 | 6.9 (3) | C2—N1—C1—C4 | 179.0 (2) |
| O3—C5—C6—O2 | −171.78 (19) | C3—N2—C1—N1 | 0.0 (2) |
| N1—C2—C3—N2 | 0.0 (2) | C3—N2—C1—C4 | −179.1 (2) |
| C1—N2—C3—C2 | 0.0 (2) |
| H··· | ||||
| N1—H1···O3 | 0.88 | 1.94 | 2.811 (2) | 172 |
| N1—H1···O1 | 0.88 | 2.50 | 2.991 (2) | 116 |
| N2—H2···O4i | 0.88 | 1.97 | 2.842 (2) | 169 |
| N2—H2···O2i | 0.88 | 2.49 | 2.977 (2) | 116 |
| O1—H1 | 0.84 | 1.69 | 2.5234 (19) | 169 |
| O6—H6 | 0.85 | 2.02 | 2.7893 (19) | 150 |
| O6—H6 | 0.85 | 1.87 | 2.700 (2) | 166 |
| O5—H5 | 0.85 | 1.82 | 2.672 (2) | 176 |
| O5—H5 | 0.85 | 1.88 | 2.720 (2) | 167 |