| Literature DB >> 27006807 |
Mouhamadou Birame Diop1, Libasse Diop1, Laurent Plasseraud2, Thierry Maris3.
Abstract
In the structure of the hydrated title salt, (C4H7N2)2[Sn(C2O4)2(OH)2]·H2O, the asymmetric unit comprises one stannate(IV) dianion, two organic cations and one water mol-ecule of crystallization. The [Sn(C2O4)2(OH)2](2-) dianion consists of an Sn(IV) atom chelated by two oxalate anions and coordinated by two OH(-) ligands in a cis octa-hedral arrangement. Neighbouring anions are connected through O-H⋯O hydrogen bonds between hydroxide groups and non-coordinating oxalate O atoms into layers expanding parallel to (100). In addition, cations and anions are linked through N-H⋯O hydrogen bonds, and the water mol-ecule bridges two anions with two O-H⋯O hydrogen bonds and is also the acceptor of an N-H⋯O hydrogen bond with one of the cations. Weak C-H⋯O hydrogen bonds are also observed. The intricate hydrogen bonding leads to the formation of a three-dimensional network.Entities:
Keywords: crystal structure; hydrogen bonds; organotin(IV) complex
Year: 2016 PMID: 27006807 PMCID: PMC4778813 DOI: 10.1107/S2056989016002061
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The structure of the molecular components in the title compound, with displacement ellipsoids drawn at the 50% probability level. H atoms are drawn as spheres of arbitrary radius and hydrogen bonds are shown as dashed lines.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O9—H9⋯O7i | 0.86 | 2.00 | 2.835 (3) | 163 |
| O10—H10⋯O4ii | 0.87 | 2.06 | 2.909 (3) | 167 |
| O11—H11 | 0.83 (2) | 1.95 (2) | 2.766 (4) | 169 (5) |
| O11—H11 | 0.83 (2) | 2.10 (2) | 2.914 (4) | 170 (7) |
| N1—H1⋯O3iv | 0.88 | 1.97 | 2.793 (4) | 156 |
| N1—H1⋯O4iv | 0.88 | 2.50 | 3.131 (3) | 129 |
| N2—H2⋯O9 | 0.88 | 1.90 | 2.742 (3) | 160 |
| N3—H3⋯O11 | 0.88 | 1.84 | 2.713 (4) | 175 |
| N4—H4⋯O8v | 0.88 | 1.94 | 2.787 (4) | 161 |
| C5—H5 | 0.98 | 2.55 | 3.460 (4) | 155 |
| C7—H7⋯O2vi | 0.95 | 2.39 | 3.327 (4) | 169 |
| C8—H8⋯O4ii | 0.95 | 2.58 | 3.444 (4) | 152 |
| C12—H12⋯O5vii | 0.95 | 2.33 | 3.232 (4) | 159 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .
Figure 2A view of a central stannate dianion (ball-and-stick representation) surrounded by its hydrogen-bonded neighbours (stick representation), viz three cations, two water molecules and four other stannate anions. Hydrogen bonds are displayed as black dotted lines and H atoms not involved in hydrogen bonding have been omitted for clarity.
Experimental details
| Crystal data | |
| Chemical formula | (C4H7N2)2[Sn(C2O4)2(H2O)2]·H2O |
|
| 512.99 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 110 |
|
| 20.1391 (13), 7.0651 (5), 13.4942 (9) |
| β (°) | 106.582 (2) |
|
| 1840.2 (2) |
|
| 4 |
| Radiation type | Ga |
| μ (mm−1) | 7.83 |
| Crystal size (mm) | 0.19 × 0.11 × 0.09 |
| Data collection | |
| Diffractometer | Bruker Venture Metaljet |
| Absorption correction | Multi-scan ( |
|
| 0.509, 0.752 |
| No. of measured, independent and observed [ | 42907, 4235, 4110 |
|
| 0.058 |
| (sin θ/λ)max (Å−1) | 0.651 |
| Refinement | |
|
| 0.040, 0.101, 1.07 |
| No. of reflections | 4235 |
| No. of parameters | 265 |
| No. of restraints | 4 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 1.87, −0.81 |
Computer programs: APEX2 and SAINT (Bruker, 2014 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸), OLEX2 (Dolomanov et al., 2009 ▸), Mercury (Macrae et al., 2008 ▸) and publCIF (Westrip, 2010 ▸).
| (C4H7N2)2[Sn(C2O4)2(H2O)2]·H2O | |
| Monoclinic, | Ga |
| Cell parameters from 9589 reflections | |
| θ = 4.2–60.8° | |
| µ = 7.83 mm−1 | |
| β = 106.582 (2)° | |
| Block, clear light colourless | |
| 0.19 × 0.11 × 0.09 mm |
| Bruker Venture Metaljet diffractometer | 4235 independent reflections |
| Radiation source: Metal Jet, Gallium Liquid Metal Jet Source | 4110 reflections with |
| Helios MX Mirror Optics monochromator | |
| Detector resolution: 10.24 pixels mm-1 | θmax = 60.9°, θmin = 2.0° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 42907 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 4235 reflections | Δρmax = 1.87 e Å−3 |
| 265 parameters | Δρmin = −0.81 e Å−3 |
| 4 restraints |
| Experimental. X-ray crystallographic data for I were collected from a single-crystal sample, which was mounted on a loop fiber. Data were collected using a Bruker Venture diffractometer equipped with a Photon 100 CMOS Detector, a Helios MX optics and a Kappa goniometer. The crystal-to-detector distance was 4.0 cm, and the data collection was carried out in 1024 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Sn1 | 0.24060 (2) | 0.62119 (3) | 0.27535 (2) | 0.02481 (10) | |
| O1 | 0.22492 (11) | 0.6762 (3) | 0.11720 (17) | 0.0312 (4) | |
| O2 | 0.13386 (12) | 0.5897 (3) | 0.21916 (18) | 0.0293 (5) | |
| O3 | 0.04507 (12) | 0.6473 (3) | 0.07971 (18) | 0.0330 (5) | |
| O4 | 0.13911 (12) | 0.7325 (3) | −0.02786 (17) | 0.0347 (5) | |
| O5 | 0.34706 (12) | 0.6212 (3) | 0.29967 (19) | 0.0278 (5) | |
| O6 | 0.25904 (10) | 0.3368 (3) | 0.24215 (18) | 0.0280 (4) | |
| O7 | 0.34600 (13) | 0.1302 (3) | 0.2613 (2) | 0.0368 (6) | |
| O8 | 0.43752 (11) | 0.4264 (3) | 0.3297 (2) | 0.0347 (5) | |
| O9 | 0.24047 (12) | 0.9006 (3) | 0.2994 (2) | 0.0306 (5) | |
| H9 | 0.2722 | 0.9540 | 0.2777 | 0.046* | |
| O10 | 0.24113 (12) | 0.5339 (3) | 0.41448 (17) | 0.0321 (5) | |
| H10 | 0.2163 | 0.6085 | 0.4403 | 0.048* | |
| C1 | 0.16053 (15) | 0.6868 (4) | 0.0632 (2) | 0.0274 (6) | |
| C2 | 0.10678 (17) | 0.6380 (4) | 0.1231 (2) | 0.0273 (6) | |
| C3 | 0.32352 (15) | 0.2896 (4) | 0.2648 (2) | 0.0280 (6) | |
| C4 | 0.37567 (15) | 0.4559 (4) | 0.3017 (2) | 0.0275 (6) | |
| N1 | 0.01942 (13) | 1.1771 (4) | 0.1086 (2) | 0.0289 (5) | |
| H1 | −0.0115 | 1.2288 | 0.0559 | 0.043* | |
| N2 | 0.11571 (14) | 1.0703 (4) | 0.2068 (2) | 0.0299 (5) | |
| H2 | 0.1597 | 1.0387 | 0.2303 | 0.045* | |
| C5 | 0.12035 (18) | 1.2002 (5) | 0.0351 (3) | 0.0343 (7) | |
| H5A | 0.1243 | 1.0864 | −0.0043 | 0.051* | |
| H5B | 0.1667 | 1.2509 | 0.0683 | 0.051* | |
| H5C | 0.0928 | 1.2956 | −0.0116 | 0.051* | |
| C6 | 0.08607 (16) | 1.1515 (4) | 0.1151 (2) | 0.0271 (6) | |
| C7 | 0.00616 (19) | 1.1103 (4) | 0.1971 (3) | 0.0332 (7) | |
| H7 | −0.0372 | 1.1110 | 0.2118 | 0.040* | |
| C8 | 0.06634 (17) | 1.0440 (5) | 0.2585 (2) | 0.0334 (6) | |
| H8 | 0.0736 | 0.9893 | 0.3250 | 0.040* | |
| N3 | 0.40483 (15) | 0.0861 (4) | 0.5690 (2) | 0.0342 (6) | |
| H3 | 0.3611 | 0.1160 | 0.5404 | 0.051* | |
| N4 | 0.49720 (14) | −0.0750 (4) | 0.6344 (2) | 0.0306 (5) | |
| H4 | 0.5252 | −0.1712 | 0.6567 | 0.046* | |
| C9 | 0.38714 (19) | −0.2637 (5) | 0.5737 (3) | 0.0390 (7) | |
| H9A | 0.4017 | −0.3457 | 0.6346 | 0.059* | |
| H9B | 0.3941 | −0.3298 | 0.5136 | 0.059* | |
| H9C | 0.3380 | −0.2320 | 0.5604 | 0.059* | |
| C10 | 0.42895 (17) | −0.0874 (5) | 0.5925 (2) | 0.0298 (6) | |
| C11 | 0.45913 (19) | 0.2124 (5) | 0.5965 (3) | 0.0380 (7) | |
| H11 | 0.4562 | 0.3460 | 0.5881 | 0.046* | |
| C12 | 0.5171 (2) | 0.1116 (4) | 0.6374 (3) | 0.0347 (7) | |
| H12 | 0.5628 | 0.1599 | 0.6633 | 0.042* | |
| O11 | 0.26942 (14) | 0.1609 (4) | 0.4740 (2) | 0.0406 (6) | |
| H11A | 0.258 (3) | 0.267 (3) | 0.449 (4) | 0.074 (18)* | |
| H11B | 0.259 (4) | 0.079 (6) | 0.428 (4) | 0.10 (2)* |
| Sn1 | 0.01935 (13) | 0.02397 (14) | 0.02993 (14) | 0.00241 (6) | 0.00517 (9) | 0.00129 (6) |
| O1 | 0.0245 (10) | 0.0368 (11) | 0.0333 (11) | −0.0011 (9) | 0.0097 (8) | 0.0009 (9) |
| O2 | 0.0236 (10) | 0.0338 (11) | 0.0311 (11) | 0.0006 (9) | 0.0088 (9) | 0.0052 (9) |
| O3 | 0.0233 (11) | 0.0407 (12) | 0.0327 (11) | −0.0004 (9) | 0.0043 (9) | 0.0021 (9) |
| O4 | 0.0353 (12) | 0.0380 (12) | 0.0295 (11) | 0.0011 (9) | 0.0073 (9) | 0.0035 (9) |
| O5 | 0.0205 (10) | 0.0245 (11) | 0.0389 (12) | 0.0019 (7) | 0.0092 (9) | 0.0008 (8) |
| O6 | 0.0216 (10) | 0.0263 (10) | 0.0357 (11) | −0.0001 (8) | 0.0075 (8) | −0.0016 (9) |
| O7 | 0.0286 (12) | 0.0265 (12) | 0.0561 (16) | 0.0006 (8) | 0.0136 (11) | −0.0043 (9) |
| O8 | 0.0218 (10) | 0.0284 (10) | 0.0524 (14) | 0.0023 (9) | 0.0080 (10) | 0.0003 (10) |
| O9 | 0.0266 (12) | 0.0241 (10) | 0.0408 (12) | 0.0015 (8) | 0.0090 (9) | 0.0010 (9) |
| O10 | 0.0329 (11) | 0.0344 (12) | 0.0297 (10) | 0.0044 (9) | 0.0100 (9) | 0.0037 (9) |
| C1 | 0.0257 (14) | 0.0237 (14) | 0.0321 (14) | 0.0011 (11) | 0.0070 (11) | −0.0011 (11) |
| C2 | 0.0263 (15) | 0.0241 (14) | 0.0295 (14) | −0.0003 (10) | 0.0046 (12) | −0.0011 (10) |
| C3 | 0.0250 (14) | 0.0259 (14) | 0.0335 (14) | −0.0011 (11) | 0.0089 (11) | −0.0020 (11) |
| C4 | 0.0253 (14) | 0.0256 (14) | 0.0311 (14) | 0.0012 (11) | 0.0071 (11) | 0.0005 (11) |
| N1 | 0.0238 (12) | 0.0302 (13) | 0.0311 (12) | 0.0037 (10) | 0.0055 (10) | 0.0016 (10) |
| N2 | 0.0241 (12) | 0.0287 (12) | 0.0342 (13) | 0.0026 (10) | 0.0039 (10) | −0.0011 (11) |
| C5 | 0.0340 (16) | 0.0342 (17) | 0.0375 (16) | −0.0007 (13) | 0.0146 (13) | −0.0016 (13) |
| C6 | 0.0242 (14) | 0.0246 (13) | 0.0324 (15) | 0.0008 (11) | 0.0077 (12) | −0.0019 (11) |
| C7 | 0.0300 (17) | 0.0335 (17) | 0.0377 (17) | 0.0005 (12) | 0.0122 (14) | −0.0001 (12) |
| C8 | 0.0378 (17) | 0.0298 (16) | 0.0319 (15) | −0.0003 (13) | 0.0086 (13) | 0.0019 (12) |
| N3 | 0.0305 (14) | 0.0313 (13) | 0.0377 (14) | 0.0056 (11) | 0.0048 (11) | −0.0020 (11) |
| N4 | 0.0262 (13) | 0.0274 (12) | 0.0360 (14) | 0.0032 (11) | 0.0052 (11) | −0.0020 (11) |
| C9 | 0.0348 (17) | 0.0329 (17) | 0.0463 (18) | −0.0007 (14) | 0.0067 (14) | −0.0071 (14) |
| C10 | 0.0266 (15) | 0.0309 (14) | 0.0313 (15) | 0.0035 (12) | 0.0071 (12) | −0.0041 (12) |
| C11 | 0.0416 (18) | 0.0270 (15) | 0.0443 (18) | 0.0000 (13) | 0.0106 (15) | −0.0007 (13) |
| C12 | 0.0328 (17) | 0.0324 (17) | 0.0384 (17) | −0.0040 (12) | 0.0092 (14) | −0.0029 (12) |
| O11 | 0.0375 (13) | 0.0423 (13) | 0.0409 (13) | 0.0100 (11) | 0.0095 (11) | 0.0049 (12) |
| Sn1—O1 | 2.103 (2) | N2—C8 | 1.380 (4) |
| Sn1—O2 | 2.077 (2) | C5—H5A | 0.9800 |
| Sn1—O5 | 2.074 (2) | C5—H5B | 0.9800 |
| Sn1—O6 | 2.114 (2) | C5—H5C | 0.9800 |
| Sn1—O9 | 2.001 (2) | C5—C6 | 1.478 (4) |
| Sn1—O10 | 1.973 (2) | C7—H7 | 0.9500 |
| O1—C1 | 1.296 (4) | C7—C8 | 1.342 (5) |
| O2—C2 | 1.300 (4) | C8—H8 | 0.9500 |
| O3—C2 | 1.215 (4) | N3—H3 | 0.8800 |
| O4—C1 | 1.223 (4) | N3—C10 | 1.324 (4) |
| O5—C4 | 1.299 (4) | N3—C11 | 1.378 (5) |
| O6—C3 | 1.290 (4) | N4—H4 | 0.8800 |
| O7—C3 | 1.220 (4) | N4—C10 | 1.332 (4) |
| O8—C4 | 1.212 (4) | N4—C12 | 1.375 (4) |
| O9—H9 | 0.8616 | C9—H9A | 0.9800 |
| O10—H10 | 0.8653 | C9—H9B | 0.9800 |
| C1—C2 | 1.563 (4) | C9—H9C | 0.9800 |
| C3—C4 | 1.560 (4) | C9—C10 | 1.484 (5) |
| N1—H1 | 0.8800 | C11—H11 | 0.9500 |
| N1—C6 | 1.332 (4) | C11—C12 | 1.344 (5) |
| N1—C7 | 1.379 (4) | C12—H12 | 0.9500 |
| N2—H2 | 0.8800 | O11—H11A | 0.831 (15) |
| N2—C6 | 1.339 (4) | O11—H11B | 0.827 (16) |
| O1—Sn1—O6 | 86.86 (9) | C8—N2—H2 | 125.4 |
| O2—Sn1—O1 | 79.01 (9) | H5A—C5—H5B | 109.5 |
| O2—Sn1—O6 | 92.69 (8) | H5A—C5—H5C | 109.5 |
| O5—Sn1—O1 | 90.55 (9) | H5B—C5—H5C | 109.5 |
| O5—Sn1—O2 | 166.65 (9) | C6—C5—H5A | 109.5 |
| O5—Sn1—O6 | 78.32 (8) | C6—C5—H5B | 109.5 |
| O9—Sn1—O1 | 88.58 (10) | C6—C5—H5C | 109.5 |
| O9—Sn1—O2 | 96.65 (9) | N1—C6—N2 | 107.1 (3) |
| O9—Sn1—O5 | 91.33 (8) | N1—C6—C5 | 126.3 (3) |
| O9—Sn1—O6 | 168.64 (9) | N2—C6—C5 | 126.6 (3) |
| O10—Sn1—O1 | 169.11 (9) | N1—C7—H7 | 126.6 |
| O10—Sn1—O2 | 92.17 (9) | C8—C7—N1 | 106.8 (3) |
| O10—Sn1—O5 | 97.17 (9) | C8—C7—H7 | 126.6 |
| O10—Sn1—O6 | 87.19 (9) | N2—C8—H8 | 126.4 |
| O10—Sn1—O9 | 98.87 (10) | C7—C8—N2 | 107.2 (3) |
| C1—O1—Sn1 | 114.71 (19) | C7—C8—H8 | 126.4 |
| C2—O2—Sn1 | 115.6 (2) | C10—N3—H3 | 125.5 |
| C4—O5—Sn1 | 115.80 (18) | C10—N3—C11 | 109.1 (3) |
| C3—O6—Sn1 | 114.93 (19) | C11—N3—H3 | 125.5 |
| Sn1—O9—H9 | 110.0 | C10—N4—H4 | 125.3 |
| Sn1—O10—H10 | 110.2 | C10—N4—C12 | 109.4 (3) |
| O1—C1—C2 | 115.2 (3) | C12—N4—H4 | 125.3 |
| O4—C1—O1 | 126.1 (3) | H9A—C9—H9B | 109.5 |
| O4—C1—C2 | 118.7 (3) | H9A—C9—H9C | 109.5 |
| O2—C2—C1 | 114.7 (3) | H9B—C9—H9C | 109.5 |
| O3—C2—O2 | 125.1 (3) | C10—C9—H9A | 109.5 |
| O3—C2—C1 | 120.2 (3) | C10—C9—H9B | 109.5 |
| O6—C3—C4 | 114.9 (3) | C10—C9—H9C | 109.5 |
| O7—C3—O6 | 126.1 (3) | N3—C10—N4 | 107.7 (3) |
| O7—C3—C4 | 119.0 (3) | N3—C10—C9 | 125.8 (3) |
| O5—C4—C3 | 114.6 (2) | N4—C10—C9 | 126.5 (3) |
| O8—C4—O5 | 124.8 (3) | N3—C11—H11 | 126.4 |
| O8—C4—C3 | 120.6 (3) | C12—C11—N3 | 107.3 (3) |
| C6—N1—H1 | 125.2 | C12—C11—H11 | 126.4 |
| C6—N1—C7 | 109.7 (3) | N4—C12—H12 | 126.7 |
| C7—N1—H1 | 125.2 | C11—C12—N4 | 106.6 (3) |
| C6—N2—H2 | 125.4 | C11—C12—H12 | 126.7 |
| C6—N2—C8 | 109.2 (3) | H11A—O11—H11B | 110 (3) |
| Sn1—O1—C1—O4 | 173.7 (3) | O7—C3—C4—O8 | −2.5 (5) |
| Sn1—O1—C1—C2 | −5.5 (3) | N1—C7—C8—N2 | −0.2 (4) |
| Sn1—O2—C2—O3 | −172.4 (2) | C6—N1—C7—C8 | 0.4 (4) |
| Sn1—O2—C2—C1 | 7.4 (3) | C6—N2—C8—C7 | 0.0 (4) |
| Sn1—O5—C4—O8 | −168.6 (3) | C7—N1—C6—N2 | −0.4 (4) |
| Sn1—O5—C4—C3 | 11.0 (3) | C7—N1—C6—C5 | 178.5 (3) |
| Sn1—O6—C3—O7 | 172.8 (3) | C8—N2—C6—N1 | 0.2 (4) |
| Sn1—O6—C3—C4 | −6.1 (3) | C8—N2—C6—C5 | −178.7 (3) |
| O1—C1—C2—O2 | −1.2 (4) | N3—C11—C12—N4 | −0.1 (4) |
| O1—C1—C2—O3 | 178.6 (3) | C10—N3—C11—C12 | 0.0 (4) |
| O4—C1—C2—O2 | 179.6 (3) | C10—N4—C12—C11 | 0.2 (4) |
| O4—C1—C2—O3 | −0.7 (4) | C11—N3—C10—N4 | 0.1 (4) |
| O6—C3—C4—O5 | −3.2 (4) | C11—N3—C10—C9 | −179.0 (3) |
| O6—C3—C4—O8 | 176.5 (3) | C12—N4—C10—N3 | −0.2 (4) |
| O7—C3—C4—O5 | 177.8 (3) | C12—N4—C10—C9 | 179.0 (3) |
| H··· | ||||
| O9—H9···O7i | 0.86 | 2.00 | 2.835 (3) | 163 |
| O10—H10···O4ii | 0.87 | 2.06 | 2.909 (3) | 167 |
| O11—H11 | 0.83 (2) | 1.95 (2) | 2.766 (4) | 169 (5) |
| O11—H11 | 0.83 (2) | 2.10 (2) | 2.914 (4) | 170 (7) |
| N1—H1···O3iv | 0.88 | 1.97 | 2.793 (4) | 156 |
| N1—H1···O4iv | 0.88 | 2.50 | 3.131 (3) | 129 |
| N2—H2···O9 | 0.88 | 1.90 | 2.742 (3) | 160 |
| N3—H3···O11 | 0.88 | 1.84 | 2.713 (4) | 175 |
| N4—H4···O8v | 0.88 | 1.94 | 2.787 (4) | 161 |
| C5—H5 | 0.98 | 2.55 | 3.460 (4) | 155 |
| C7—H7···O2vi | 0.95 | 2.39 | 3.327 (4) | 169 |
| C8—H8···O4ii | 0.95 | 2.58 | 3.444 (4) | 152 |
| C12—H12···O5vii | 0.95 | 2.33 | 3.232 (4) | 159 |