Literature DB >> 27498086

Structural biology of glucan phosphatases from humans to plants.

Matthew S Gentry1, M Kathryn Brewer2, Craig W Vander Kooi3.   

Abstract

Glucan phosphatases are functionally conserved at the enzymatic level, dephosphorylating glycogen in animals and starch in plants. The human glucan phosphatase laforin is the founding member of the family and it is comprised of a carbohydrate binding module (CBM) domain followed by a dual specificity phosphatase (DSP) domain. Plants encode two glucan phosphatases: Starch EXcess4 (SEX4) and Like Sex Four2 (LSF2). SEX4 contains a DSP domain followed by a CBM domain, while LSF2 contains a DSP domain and lacks a CBM. This review demonstrates how glucan phosphatase function is conserved and highlights how each family member employs a unique mechanism to bind and dephosphorylate glucan substrates.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27498086      PMCID: PMC5161650          DOI: 10.1016/j.sbi.2016.07.015

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  53 in total

Review 1.  The catalytic mechanism of protein tyrosine phosphatases revisited.

Authors:  K Kolmodin; J Aqvist
Journal:  FEBS Lett       Date:  2001-06-08       Impact factor: 4.124

2.  Identification of a novel enzyme required for starch metabolism in Arabidopsis leaves. The phosphoglucan, water dikinase.

Authors:  Oliver Kötting; Kerstin Pusch; Axel Tiessen; Peter Geigenberger; Martin Steup; Gerhard Ritte
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

3.  The distribution of covalently bound phosphate in the starch granule in relation to starch crystallinity.

Authors:  A Blennow; A M Bay-Smidt; C E Olsen; B L Møller
Journal:  Int J Biol Macromol       Date:  2000-06-13       Impact factor: 6.953

4.  Mutants of Arabidopsis with altered regulation of starch degradation.

Authors:  T Caspar; T P Lin; G Kakefuda; L Benbow; J Preiss; C Somerville
Journal:  Plant Physiol       Date:  1991-04       Impact factor: 8.340

5.  A novel isoform of glucan, water dikinase phosphorylates pre-phosphorylated alpha-glucans and is involved in starch degradation in Arabidopsis.

Authors:  Lone Baunsgaard; Henrik Lütken; René Mikkelsen; Mikkel A Glaring; Tam T Pham; Andreas Blennow
Journal:  Plant J       Date:  2005-02       Impact factor: 6.417

6.  The Arabidopsis sex1 mutant is defective in the R1 protein, a general regulator of starch degradation in plants, and not in the chloroplast hexose transporter.

Authors:  T S Yu; H Kofler; R E Häusler; D Hille; U I Flügge; S C Zeeman; A M Smith; J Kossmann; J Lloyd; G Ritte; M Steup; W L Lue; J Chen; A Weber
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

7.  Targeted disruption of the Epm2a gene causes formation of Lafora inclusion bodies, neurodegeneration, ataxia, myoclonus epilepsy and impaired behavioral response in mice.

Authors:  Subramaniam Ganesh; Antonio V Delgado-Escueta; Toshiro Sakamoto; Maria Rosa Avila; Jesus Machado-Salas; Yoshinobu Hoshii; Takumi Akagi; Hiroshi Gomi; Toshimitsu Suzuki; Kenji Amano; Kishan Lal Agarwala; Yuki Hasegawa; Dong-Sheng Bai; Tokuhiro Ishihara; Tsutomu Hashikawa; Shigeyoshi Itohara; Eain M Cornford; Hiroaki Niki; Kazuhiro Yamakawa
Journal:  Hum Mol Genet       Date:  2002-05-15       Impact factor: 6.150

8.  The starch-related R1 protein is an alpha -glucan, water dikinase.

Authors:  Gerhard Ritte; James R Lloyd; Nora Eckermann; Antje Rottmann; Jens Kossmann; Martin Steup
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-14       Impact factor: 11.205

9.  Similar protein phosphatases control starch metabolism in plants and glycogen metabolism in mammals.

Authors:  Totte Niittylä; Sylviane Comparot-Moss; Wei-Ling Lue; Gaëlle Messerli; Martine Trevisan; Michael D J Seymour; John A Gatehouse; Dorthe Villadsen; Steven M Smith; Jychian Chen; Samuel C Zeeman; Alison M Smith
Journal:  J Biol Chem       Date:  2006-03-02       Impact factor: 5.157

Review 10.  Carbohydrate-binding modules: fine-tuning polysaccharide recognition.

Authors:  Alisdair B Boraston; David N Bolam; Harry J Gilbert; Gideon J Davies
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

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  9 in total

Review 1.  Lafora disease offers a unique window into neuronal glycogen metabolism.

Authors:  Matthew S Gentry; Joan J Guinovart; Berge A Minassian; Peter J Roach; Jose M Serratosa
Journal:  J Biol Chem       Date:  2018-02-26       Impact factor: 5.157

Review 2.  Biochemical and clinical aspects of glycogen storage diseases.

Authors:  Sara S Ellingwood; Alan Cheng
Journal:  J Endocrinol       Date:  2018-06-06       Impact factor: 4.286

3.  The unique evolution of the carbohydrate-binding module CBM20 in laforin.

Authors:  Andrea Kuchtová; Matthew S Gentry; Štefan Janeček
Journal:  FEBS Lett       Date:  2018-02-15       Impact factor: 4.124

4.  A novel EPM2A mutation yields a slow progression form of Lafora disease.

Authors:  Maria Adelaida Garcia-Gimeno; Pilar Natalia Rodilla-Ramirez; Rosa Viana; Xavier Salas-Puig; M Kathryn Brewer; Matthew S Gentry; Pascual Sanz
Journal:  Epilepsy Res       Date:  2018-07-21       Impact factor: 3.045

5.  Oligomerization and carbohydrate binding of glucan phosphatases.

Authors:  Savita Sharma; Carl D Vander Kooi; Matthew S Gentry; Craig W Vander Kooi
Journal:  Anal Biochem       Date:  2018-10-03       Impact factor: 3.365

Review 6.  Brain Glycogen Structure and Its Associated Proteins: Past, Present and Future.

Authors:  M Kathryn Brewer; Matthew S Gentry
Journal:  Adv Neurobiol       Date:  2019

7.  Generation and characterization of a laforin nanobody inhibitor.

Authors:  Zoe R Simmons; Savita Sharma; Jeremiah Wayne; Sheng Li; Craig W Vander Kooi; Matthew S Gentry
Journal:  Clin Biochem       Date:  2021-04-05       Impact factor: 3.625

8.  Identification and analysis of OsttaDSP, a phosphoglucan phosphatase from Ostreococcus tauri.

Authors:  Julieta B Carrillo; Diego F Gomez-Casati; Mariana Martín; Maria V Busi
Journal:  PLoS One       Date:  2018-01-23       Impact factor: 3.240

Review 9.  Protein Kinases and Phosphatases of the Plastid and Their Potential Role in Starch Metabolism.

Authors:  Chris White-Gloria; Jayde J Johnson; Kayla Marritt; Amr Kataya; Ahmad Vahab; Greg B Moorhead
Journal:  Front Plant Sci       Date:  2018-07-17       Impact factor: 5.753

  9 in total

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