Literature DB >> 11412859

The catalytic mechanism of protein tyrosine phosphatases revisited.

K Kolmodin1, J Aqvist.   

Abstract

Experimental and theoretical studies of the catalytic mechanism in protein tyrosine phosphatases and dual specific phosphatases are reviewed. The structural properties of these enzymes contributing to the efficient rate enhancement of phosphate monoester hydrolysis have been established during the last decade. There are, however, uncertainties in the interpretation of available experimental data that make the commonly assumed reaction mechanism somewhat doubtful. Theoretical calculations as well as analysis of crystal structures point towards an alternative interpretation of the ionisation state in the reactive complex.

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Year:  2001        PMID: 11412859     DOI: 10.1016/s0014-5793(01)02479-6

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  24 in total

1.  Crystallization and preliminary X-ray diffraction analysis of rat protein tyrosine phosphatase eta.

Authors:  Huita C Matozo; Alessandro S Nascimento; Maria A M Santos; Rodolfo Iuliano; Alfredo Fusco; Igor Polikarpov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-08-26

2.  Low-resolution structure and fluorescence anisotropy analysis of protein tyrosine phosphatase eta catalytic domain.

Authors:  Huita C Matozo; Maria A M Santos; Mario de Oliveira Neto; Lucas Bleicher; Luís Mauricio T R Lima; Rodolfo Iuliano; Alfredo Fusco; Igor Polikarpov
Journal:  Biophys J       Date:  2007-03-30       Impact factor: 4.033

Review 3.  The cysteine proteome.

Authors:  Young-Mi Go; Joshua D Chandler; Dean P Jones
Journal:  Free Radic Biol Med       Date:  2015-04-03       Impact factor: 7.376

Review 4.  Structural biology of glucan phosphatases from humans to plants.

Authors:  Matthew S Gentry; M Kathryn Brewer; Craig W Vander Kooi
Journal:  Curr Opin Struct Biol       Date:  2016-08-04       Impact factor: 6.809

5.  LipA, a tyrosine and lipid phosphatase involved in the virulence of Listeria monocytogenes.

Authors:  Renate Kastner; Olivier Dussurget; Cristel Archambaud; Elisabeth Kernbauer; Didier Soulat; Pascale Cossart; Thomas Decker
Journal:  Infect Immun       Date:  2011-03-28       Impact factor: 3.441

6.  Utilization of nitrophenylphosphates and oxime-based ligation for the development of nanomolar affinity inhibitors of the Yersinia pestis outer protein H (YopH) phosphatase.

Authors:  Medhanit Bahta; George T Lountos; Beverly Dyas; Sung-Eun Kim; Robert G Ulrich; David S Waugh; Terrence R Burke
Journal:  J Med Chem       Date:  2011-03-28       Impact factor: 7.446

Review 7.  Why nature really chose phosphate.

Authors:  Shina C L Kamerlin; Pankaz K Sharma; Ram B Prasad; Arieh Warshel
Journal:  Q Rev Biophys       Date:  2013-01-15       Impact factor: 5.318

8.  Tyrosine Phosphorylation and Dephosphorylation in Burkholderia cenocepacia Affect Biofilm Formation, Growth under Nutritional Deprivation, and Pathogenicity.

Authors:  Angel Andrade; Faviola Tavares-Carreón; Maryam Khodai-Kalaki; Miguel A Valvano
Journal:  Appl Environ Microbiol       Date:  2015-11-20       Impact factor: 4.792

9.  Integrating virtual and biochemical screening for protein tyrosine phosphatase inhibitor discovery.

Authors:  Katie R Martin; Pooja Narang; José L Medina-Franco; Nathalie Meurice; Jeffrey P MacKeigan
Journal:  Methods       Date:  2013-08-20       Impact factor: 3.608

10.  Molecular dynamics simulation study of PTP1B with allosteric inhibitor and its application in receptor based pharmacophore modeling.

Authors:  Kavitha Bharatham; Nagakumar Bharatham; Yong Jung Kwon; Keun Woo Lee
Journal:  J Comput Aided Mol Des       Date:  2008-08-07       Impact factor: 3.686

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