Literature DB >> 30291838

Oligomerization and carbohydrate binding of glucan phosphatases.

Savita Sharma1, Carl D Vander Kooi1, Matthew S Gentry1, Craig W Vander Kooi2.   

Abstract

Glucan phosphatases are a unique subset of the phosphatase family that bind to and dephosphorylate carbohydrate substrates. Family members are found in diverse organisms ranging from single-cell red algae to humans. The nature of their functional oligomerization has been a source of considerable debate. We demonstrate that the human laforin protein behaves aberrantly when subjected to Size Exclusion Chromotography (SEC) analysis due to interaction with the carbohydrate-based matrix. This interaction complicates the analysis of laforin human disease mutations. Herein, we show that SEC with Multi-Angle static Light Scattering (SEC-MALS) provides a method to robustly define the oligomerization state of laforin and laforin variants. We further analyzed glucan phosphatases from photosynthetic organisms to define if this interaction was characteristic of all glucan phosphatases. Starch EXcess-four (SEX4) from green plants was found to lack significant interaction with the matrix and instead exists as a monomer. Conversely, Cm-laforin, from red algae, exists as a monomer in solution while still exhibiting significant interaction with the matrix. These data demonstrate a range of oligomerization behaviors of members of the glucan phosphatase family, and establish SEC-MALS as a robust methodology to quantify and compare oligomerization states between different proteins and protein variants in this family.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Glucan phosphatase; Laforin; Oligomerization; SEC-MALS

Mesh:

Substances:

Year:  2018        PMID: 30291838      PMCID: PMC6233729          DOI: 10.1016/j.ab.2018.10.003

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  14 in total

1.  Dimerization of Laforin is required for its optimal phosphatase activity, regulation of GSK3beta phosphorylation, and Wnt signaling.

Authors:  Yan Liu; Yin Wang; Cindy Wu; Yang Liu; Pan Zheng
Journal:  J Biol Chem       Date:  2006-09-12       Impact factor: 5.157

2.  Dimeric quaternary structure of human laforin.

Authors:  Rajeshwer S Sankhala; Adem C Koksal; Lan Ho; Felix Nitschke; Berge A Minassian; Gino Cingolani
Journal:  J Biol Chem       Date:  2014-12-23       Impact factor: 5.157

3.  Structural basis for the glucan phosphatase activity of Starch Excess4.

Authors:  Craig W Vander Kooi; Adam O Taylor; Rachel M Pace; David A Meekins; Hou-Fu Guo; Youngjun Kim; Matthew S Gentry
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

Review 4.  Structural biology of glucan phosphatases from humans to plants.

Authors:  Matthew S Gentry; M Kathryn Brewer; Craig W Vander Kooi
Journal:  Curr Opin Struct Biol       Date:  2016-08-04       Impact factor: 6.809

5.  Phosphoglucan-bound structure of starch phosphatase Starch Excess4 reveals the mechanism for C6 specificity.

Authors:  David A Meekins; Madushi Raththagala; Satrio Husodo; Cory J White; Hou-Fu Guo; Oliver Kötting; Craig W Vander Kooi; Matthew S Gentry
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-05       Impact factor: 11.205

6.  STARCH-EXCESS4 is a laforin-like Phosphoglucan phosphatase required for starch degradation in Arabidopsis thaliana.

Authors:  Oliver Kötting; Diana Santelia; Christoph Edner; Simona Eicke; Tina Marthaler; Matthew S Gentry; Sylviane Comparot-Moss; Jychian Chen; Alison M Smith; Martin Steup; Gerhard Ritte; Samuel C Zeeman
Journal:  Plant Cell       Date:  2009-01-13       Impact factor: 11.277

Review 7.  Structural mechanisms of plant glucan phosphatases in starch metabolism.

Authors:  David A Meekins; Craig W Vander Kooi; Matthew S Gentry
Journal:  FEBS J       Date:  2016-03-28       Impact factor: 5.542

8.  Mechanistic Insights into Glucan Phosphatase Activity against Polyglucan Substrates.

Authors:  David A Meekins; Madushi Raththagala; Kyle D Auger; Benjamin D Turner; Diana Santelia; Oliver Kötting; Matthew S Gentry; Craig W Vander Kooi
Journal:  J Biol Chem       Date:  2015-07-31       Impact factor: 5.157

9.  The unique evolution of the carbohydrate-binding module CBM20 in laforin.

Authors:  Andrea Kuchtová; Matthew S Gentry; Štefan Janeček
Journal:  FEBS Lett       Date:  2018-02-15       Impact factor: 4.124

10.  Plant α-glucan phosphatases SEX4 and LSF2 display different affinity for amylopectin and amylose.

Authors:  Casper Wilkens; Kyle D Auger; Nolan T Anderson; David A Meekins; Madushi Raththagala; Maher Abou Hachem; Christina M Payne; Matthew S Gentry; Birte Svensson
Journal:  FEBS Lett       Date:  2016-01-04       Impact factor: 4.124

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  2 in total

1.  Generation and characterization of a laforin nanobody inhibitor.

Authors:  Zoe R Simmons; Savita Sharma; Jeremiah Wayne; Sheng Li; Craig W Vander Kooi; Matthew S Gentry
Journal:  Clin Biochem       Date:  2021-04-05       Impact factor: 3.625

2.  An empirical pipeline for personalized diagnosis of Lafora disease mutations.

Authors:  M Kathryn Brewer; Maria Machio-Castello; Rosa Viana; Jeremiah L Wayne; Andrea Kuchtová; Zoe R Simmons; Sarah Sternbach; Sheng Li; Maria Adelaida García-Gimeno; Jose M Serratosa; Pascual Sanz; Craig W Vander Kooi; Matthew S Gentry
Journal:  iScience       Date:  2021-10-13
  2 in total

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