Literature DB >> 27491516

The Unexpected Diversity of Plant Organelle RNA Editosomes.

Tao Sun1, Stephane Bentolila1, Maureen R Hanson2.   

Abstract

Flowering plants convert many hundreds of organelle cytidines (Cs) to uridines (Us) during post-transcriptional RNA editing. Pentatricopeptide repeat (PPR) proteins dictate specificity by recognizing RNA sequences near C targets. However, the complete mechanism of the editing machinery is not yet understood. Recently, non-PPR editing factors [RNA editing factor interacting proteins (RIPs)/multiple organellar RNA editing factors (MORFs), organelle RNA recognition motif (ORRM) proteins, organelle zinc-finger (OZ) proteins, and protoporphyrinogen oxidase 1 (PPO1)] have been identified as components of the plant RNA editosome, which is a small RNA-protein complex. Surprisingly, plant editosomes are highly diverse not only with regard to the PPR proteins they contain but also in the non-PPR components that are present. Here we review the most recent progress in the field and discuss the implications of the diversity of plant editosomes for the evolution of RNA editing and for possible future applications.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  RNA recognition motif; chloroplasts; mitochondria; pentatricopeptide; protein complex; zinc-finger motif.

Mesh:

Substances:

Year:  2016        PMID: 27491516     DOI: 10.1016/j.tplants.2016.07.005

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  57 in total

1.  Mitochondrial Pentatricopeptide Repeat Protein, EMB2794, Plays a Pivotal Role in NADH Dehydrogenase Subunit nad2 mRNA Maturation in Arabidopsis thaliana.

Authors:  Fernanda Marchetti; Maximiliano Cainzos; Sofía Shevtsov; Juan Pablo Córdoba; Laure Dora Sultan; Axel Brennicke; Mizuki Takenaka; Gabriela Pagnussat; Oren Ostersetzer-Biran; Eduardo Zabaleta
Journal:  Plant Cell Physiol       Date:  2020-06-01       Impact factor: 4.927

Review 2.  Molecular and Functional Diversity of RNA Editing in Plant Mitochondria.

Authors:  Wei Tang; Caroline Luo
Journal:  Mol Biotechnol       Date:  2018-12       Impact factor: 2.695

3.  An Organelle RNA Recognition Motif Protein Is Required for Photosystem II Subunit psbF Transcript Editing.

Authors:  Justin B Hackett; Xiaowen Shi; Amy T Kobylarz; Meriah K Lucas; Ryan L Wessendorf; Kevin M Hines; Stephane Bentolila; Maureen R Hanson; Yan Lu
Journal:  Plant Physiol       Date:  2017-02-17       Impact factor: 8.340

Review 4.  Post-transcriptional mending of gene sequences: Looking under the hood of mitochondrial gene expression in diplonemids.

Authors:  Matus Valach; Sandrine Moreira; Drahomíra Faktorová; Julius Lukeš; Gertraud Burger
Journal:  RNA Biol       Date:  2016-10-07       Impact factor: 4.652

5.  Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria.

Authors:  Damien Guillaumot; Mauricio Lopez-Obando; Kevin Baudry; Alexandra Avon; Guillem Rigaill; Andéol Falcon de Longevialle; Benjamin Broche; Mizuki Takenaka; Richard Berthomé; Geert De Jaeger; Etienne Delannoy; Claire Lurin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

6.  Multiple PPR protein interactions are involved in the RNA editing system in Arabidopsis mitochondria and plastids.

Authors:  Nuria Andrés-Colás; Qiang Zhu; Mizuki Takenaka; Bert De Rybel; Dolf Weijers; Dominique Van Der Straeten
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

7.  Identification of new pentatricopeptide repeat proteins, MREF1 and 2, involved in mitochondrial RNA editing, using computational target RNA prediction.

Authors:  Takehito Kobayashi; Yusuke Yagi; Taizo Tamura; Takahiro Nakamura
Journal:  Plant Biotechnol (Tokyo)       Date:  2020-03-25       Impact factor: 1.133

8.  Stable native RIP9 complexes associate with C-to-U RNA editing activity, PPRs, RIPs, OZ1, ORRM1 and ISE2.

Authors:  Rafael Sandoval; Robert D Boyd; Alena N Kiszter; Yeva Mirzakhanyan; Paola Santibańez; Paul D Gershon; Michael L Hayes
Journal:  Plant J       Date:  2019-06-26       Impact factor: 6.417

9.  A plant pentatricopeptide repeat protein with a DYW-deaminase domain is sufficient for catalyzing C-to-U RNA editing in vitro.

Authors:  Michael L Hayes; Paola I Santibanez
Journal:  J Biol Chem       Date:  2020-01-29       Impact factor: 5.157

10.  The RNA Editing Factor SlORRM4 Is Required for Normal Fruit Ripening in Tomato.

Authors:  Yongfang Yang; Guoning Zhu; Rui Li; Shijie Yan; Daqi Fu; Benzhong Zhu; Huiqin Tian; Yunbo Luo; Hongliang Zhu
Journal:  Plant Physiol       Date:  2017-10-23       Impact factor: 8.340

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