Literature DB >> 30244436

Molecular and Functional Diversity of RNA Editing in Plant Mitochondria.

Wei Tang1,2, Caroline Luo3.   

Abstract

RNA editing is a fundamental biochemical process relating to the modification of nucleotides in messenger RNAs of functional genes in cells. RNA editing leads to re-establishment of conserved amino acid residues for functional proteins in nuclei, chloroplasts, and mitochondria. Identification of RNA editing factors that contributes to target site recognition increases our understanding of RNA editing mechanisms. Significant progress has been made in recent years in RNA editing studies for both animal and plant cells. RNA editing in nuclei and mitochondria of animal cells and in chloroplast of plant cells has been extensively documented and reviewed. RNA editing has been also extensively documented on plant mitochondria. However, functional diversity of RNA editing factors in plant mitochondria is not overviewed. Here, we review the biological significance of RNA editing, recent progress on the molecular mechanisms of RNA editing process, and function diversity of editing factors in plant mitochondrial research. We will focus on: (1) pentatricopeptide repeat proteins in Arabidopsis and in crop plants; (2) the progress of RNA editing process in plant mitochondria; (3) RNA editing-related RNA splicing; (4) RNA editing associated flower development; (5) RNA editing modulated male sterile; (6) RNA editing-regulated cell signaling; and (7) RNA editing involving abiotic stress. Advances described in this review will be valuable in expanding our understanding in RNA editing. The diverse functions of RNA editing in plant mitochondria will shed light on the investigation of molecular mechanisms that underlies plant development and abiotic stress tolerance.

Entities:  

Keywords:  Adenosine-to-inosine editing; Arabidopsis; Cytidine-to-uridine editing; Mitochondria; Pentatricopeptide repeat protein; RNA editing factor

Mesh:

Substances:

Year:  2018        PMID: 30244436     DOI: 10.1007/s12033-018-0126-z

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  105 in total

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Journal:  Mol Biol Evol       Date:  2006-07-11       Impact factor: 16.240

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Authors:  Sophie Calixte; Linda Bonen
Journal:  Mol Genet Genomics       Date:  2008-09-03       Impact factor: 3.291

5.  Mitochondrial Function and Maize Kernel Development Requires Dek2, a Pentatricopeptide Repeat Protein Involved in nad1 mRNA Splicing.

Authors:  Weiwei Qi; Yang Yang; Xuzhen Feng; Mingliang Zhang; Rentao Song
Journal:  Genetics       Date:  2016-11-04       Impact factor: 4.562

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Journal:  Mol Cell Biol       Date:  1995-03       Impact factor: 4.272

7.  SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism.

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Journal:  Plant J       Date:  2012-06-25       Impact factor: 6.417

8.  The evolutionary conservation of rps3 introns and rps19-rps3-rpl16 gene cluster in Adiantum capillus-veneris mitochondria.

Authors:  Savino Bonavita; Teresa Maria Rosaria Regina
Journal:  Curr Genet       Date:  2015-08-18       Impact factor: 3.886

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Journal:  Mol Gen Genet       Date:  1998-05

10.  Isolation of Arabidopsis ahg11, a weak ABA hypersensitive mutant defective in nad4 RNA editing.

Authors:  Maki Murayama; Shimpei Hayashi; Noriyuki Nishimura; Mayumi Ishide; Keiko Kobayashi; Yusuke Yagi; Tadao Asami; Takahiro Nakamura; Kazuo Shinozaki; Takashi Hirayama
Journal:  J Exp Bot       Date:  2012-07-21       Impact factor: 6.992

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  6 in total

1.  Mitochondrial genome of Garcinia mangostana L. variety Mesta.

Authors:  Ching-Ching Wee; Nor Azlan Nor Muhammad; Vijay Kumar Subbiah; Masanori Arita; Yasukazu Nakamura; Hoe-Han Goh
Journal:  Sci Rep       Date:  2022-06-08       Impact factor: 4.996

2.  Comprehensive analysis of complete chloroplast genome and phylogenetic aspects of ten Ficus species.

Authors:  Yuying Huang; Jing Li; Zerui Yang; Wenli An; Chunzhu Xie; Shanshan Liu; Xiasheng Zheng
Journal:  BMC Plant Biol       Date:  2022-05-23       Impact factor: 5.260

3.  Systematic analysis reveals cis and trans determinants affecting C-to-U RNA editing in Arabidopsis thaliana.

Authors:  Duan Chu; Lai Wei
Journal:  BMC Genet       Date:  2020-09-03       Impact factor: 2.797

4.  Fujian cytoplasmic male sterility and the fertility restorer gene OsRf19 provide a promising breeding system for hybrid rice.

Authors:  Haichao Jiang; Qing Lu; Shuqing Qiu; Huihui Yu; Zhengji Wang; Zhichao Yu; Yunrui Lu; Lei Wang; Fan Xia; Yuying Wu; Fan Li; Qinglu Zhang; Gang Liu; Dingding Song; Chonglie Ma; Qi Ding; Xiaobo Zhang; Lin Zhang; Xuetang Zhang; Xu Li; Jianwei Zhang; Jinghua Xiao; Xianghua Li; Naiyuan Wang; Yidan Ouyang; Fasong Zhou; Qifa Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-15       Impact factor: 12.779

5.  The complete mitochondrial genome of Taxus cuspidata (Taxaceae): eight protein-coding genes have transferred to the nuclear genome.

Authors:  Sheng-Long Kan; Ting-Ting Shen; Ping Gong; Jin-Hua Ran; Xiao-Quan Wang
Journal:  BMC Evol Biol       Date:  2020-01-20       Impact factor: 3.260

6.  Complete Sequence, Multichromosomal Architecture and Transcriptome Analysis of the Solanum tuberosum Mitochondrial Genome.

Authors:  Jean-Stéphane Varré; Nunzio D'Agostino; Pascal Touzet; Sophie Gallina; Rachele Tamburino; Concita Cantarella; Elodie Ubrig; Teodoro Cardi; Laurence Drouard; José Manuel Gualberto; Nunzia Scotti
Journal:  Int J Mol Sci       Date:  2019-09-26       Impact factor: 5.923

  6 in total

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