Literature DB >> 27477285

Distinct Metabolic States Can Support Self-Renewal and Lipogenesis in Human Pluripotent Stem Cells under Different Culture Conditions.

Hui Zhang1, Mehmet G Badur1, Ajit S Divakaruni2, Seth J Parker1, Christian Jäger3, Karsten Hiller3, Anne N Murphy2, Christian M Metallo4.   

Abstract

Recent studies have suggested that human pluripotent stem cells (hPSCs) depend primarily on glycolysis and only increase oxidative metabolism during differentiation. Here, we demonstrate that both glycolytic and oxidative metabolism can support hPSC growth and that the metabolic phenotype of hPSCs is largely driven by nutrient availability. We comprehensively characterized hPSC metabolism by using (13)C/(2)H stable isotope tracing and flux analysis to define the metabolic pathways supporting hPSC bioenergetics and biosynthesis. Although glycolytic flux consistently supported hPSC growth, chemically defined media strongly influenced the state of mitochondrial respiration and fatty acid metabolism. Lipid deficiency dramatically reprogramed pathways associated with fatty acid biosynthesis and NADPH regeneration, altering the mitochondrial function of cells and driving flux through the oxidative pentose phosphate pathway. Lipid supplementation mitigates this metabolic reprogramming and increases oxidative metabolism. These results demonstrate that self-renewing hPSCs can present distinct metabolic states and highlight the importance of medium nutrients on mitochondrial function and development.
Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27477285      PMCID: PMC4981511          DOI: 10.1016/j.celrep.2016.06.102

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  57 in total

1.  Feeder-independent culture of human embryonic stem cells.

Authors:  Tenneille E Ludwig; Veit Bergendahl; Mark E Levenstein; Junying Yu; Mitchell D Probasco; James A Thomson
Journal:  Nat Methods       Date:  2006-08       Impact factor: 28.547

2.  INCA: a computational platform for isotopically non-stationary metabolic flux analysis.

Authors:  Jamey D Young
Journal:  Bioinformatics       Date:  2014-01-11       Impact factor: 6.937

3.  Somatic oxidative bioenergetics transitions into pluripotency-dependent glycolysis to facilitate nuclear reprogramming.

Authors:  Clifford D L Folmes; Timothy J Nelson; Almudena Martinez-Fernandez; D Kent Arrell; Jelena Zlatkovic Lindor; Petras P Dzeja; Yasuhiro Ikeda; Carmen Perez-Terzic; Andre Terzic
Journal:  Cell Metab       Date:  2011-08-03       Impact factor: 27.287

4.  Evidence for an alternative glycolytic pathway in rapidly proliferating cells.

Authors:  Matthew G Vander Heiden; Jason W Locasale; Kenneth D Swanson; Hadar Sharfi; Greg J Heffron; Daniel Amador-Noguez; Heather R Christofk; Gerhard Wagner; Joshua D Rabinowitz; John M Asara; Lewis C Cantley
Journal:  Science       Date:  2010-09-17       Impact factor: 47.728

5.  Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture.

Authors:  Louise C Laurent; Igor Ulitsky; Ileana Slavin; Ha Tran; Andrew Schork; Robert Morey; Candace Lynch; Julie V Harness; Sunray Lee; Maria J Barrero; Sherman Ku; Marina Martynova; Ruslan Semechkin; Vasiliy Galat; Joel Gottesfeld; Juan Carlos Izpisua Belmonte; Chuck Murry; Hans S Keirstead; Hyun-Sook Park; Uli Schmidt; Andrew L Laslett; Franz-Josef Muller; Caroline M Nievergelt; Ron Shamir; Jeanne F Loring
Journal:  Cell Stem Cell       Date:  2011-01-07       Impact factor: 24.633

6.  Metabolic oxidation regulates embryonic stem cell differentiation.

Authors:  Oscar Yanes; Julie Clark; Diana M Wong; Gary J Patti; Antonio Sánchez-Ruiz; H Paul Benton; Sunia A Trauger; Caroline Desponts; Sheng Ding; Gary Siuzdak
Journal:  Nat Chem Biol       Date:  2010-05-02       Impact factor: 15.040

7.  Phenotypic analysis of human embryonic stem cells.

Authors:  Mark Ungrin; Michael O'Connor; Connie Eaves; Peter W Zandstra
Journal:  Curr Protoc Stem Cell Biol       Date:  2007-08

8.  Metabolic plasticity in stem cell homeostasis and differentiation.

Authors:  Clifford D L Folmes; Petras P Dzeja; Timothy J Nelson; Andre Terzic
Journal:  Cell Stem Cell       Date:  2012-11-02       Impact factor: 24.633

9.  Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases.

Authors:  Wei Xu; Hui Yang; Ying Liu; Ying Yang; Ping Wang; Se-Hee Kim; Shinsuke Ito; Chen Yang; Pu Wang; Meng-Tao Xiao; Li-xia Liu; Wen-qing Jiang; Jing Liu; Jin-ye Zhang; Bin Wang; Stephen Frye; Yi Zhang; Yan-hui Xu; Qun-ying Lei; Kun-Liang Guan; Shi-min Zhao; Yue Xiong
Journal:  Cancer Cell       Date:  2011-01-18       Impact factor: 38.585

10.  SREBP activity is regulated by mTORC1 and contributes to Akt-dependent cell growth.

Authors:  Thomas Porstmann; Claudio R Santos; Beatrice Griffiths; Megan Cully; Mary Wu; Sally Leevers; John R Griffiths; Yuen-Li Chung; Almut Schulze
Journal:  Cell Metab       Date:  2008-09       Impact factor: 27.287

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  50 in total

Review 1.  "Nutrient-sensing" and self-renewal: O-GlcNAc in a new role.

Authors:  Nikita S Sharma; Ashok K Saluja; Sulagna Banerjee
Journal:  J Bioenerg Biomembr       Date:  2017-12-05       Impact factor: 2.945

2.  Chemical Basis for Deuterium Labeling of Fat and NADPH.

Authors:  Zhaoyue Zhang; Li Chen; Ling Liu; Xiaoyang Su; Joshua D Rabinowitz
Journal:  J Am Chem Soc       Date:  2017-10-04       Impact factor: 15.419

Review 3.  Metabolism in pluripotency: Both driver and passenger?

Authors:  Perrine Dahan; Vivian Lu; Robert M T Nguyen; Stephanie A L Kennedy; Michael A Teitell
Journal:  J Biol Chem       Date:  2018-02-20       Impact factor: 5.157

Review 4.  Mitochondria and the dynamic control of stem cell homeostasis.

Authors:  Pawel Lisowski; Preethi Kannan; Barbara Mlody; Alessandro Prigione
Journal:  EMBO Rep       Date:  2018-04-16       Impact factor: 8.807

Review 5.  The Role of Metabolic Plasticity in Blood and Brain Stem Cell Pathophysiology.

Authors:  Catherine J Libby; Jonathan McConathy; Victor Darley-Usmar; Anita B Hjelmeland
Journal:  Cancer Res       Date:  2019-10-01       Impact factor: 12.701

6.  LKB1 promotes metabolic flexibility in response to energy stress.

Authors:  Seth J Parker; Robert U Svensson; Ajit S Divakaruni; Austin E Lefebvre; Anne N Murphy; Reuben J Shaw; Christian M Metallo
Journal:  Metab Eng       Date:  2016-12-26       Impact factor: 9.783

7.  Advances in Applications of Metabolomics in Pluripotent Stem Cell Research.

Authors:  Vijesh J Bhute; Xiaoping Bao; Sean P Palecek
Journal:  Curr Opin Chem Eng       Date:  2016-12-15       Impact factor: 5.163

Review 8.  Metabolic signatures of cancer cells and stem cells.

Authors:  Andrew M Intlekofer; Lydia W S Finley
Journal:  Nat Metab       Date:  2019-02-11

9.  Histone Acetyltransferase MOF Blocks Acquisition of Quiescence in Ground-State ESCs through Activating Fatty Acid Oxidation.

Authors:  Le Tran Phuc Khoa; Yao-Chang Tsan; Fengbiao Mao; Daniel M Kremer; Peter Sajjakulnukit; Li Zhang; Bo Zhou; Xin Tong; Natarajan V Bhanu; Chunaram Choudhary; Benjamin A Garcia; Lei Yin; Gary D Smith; Thomas L Saunders; Stephanie L Bielas; Costas A Lyssiotis; Yali Dou
Journal:  Cell Stem Cell       Date:  2020-06-30       Impact factor: 24.633

Review 10.  Metabolomic Applications in Stem Cell Research: a Review.

Authors:  Daniela S C Bispo; Catarina S H Jesus; Inês M C Marques; Katarzyna M Romek; Mariana B Oliveira; João F Mano; Ana M Gil
Journal:  Stem Cell Rev Rep       Date:  2021-06-16       Impact factor: 5.739

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