Literature DB >> 27475911

ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI.

Bjoern H Menze1, Heinz Handels2, Mauricio Reyes3, Oskar Maier2,4, Janina von der Gablentz5, Levin Ḧani3, Mattias P Heinrich2, Matthias Liebrand5, Stefan Winzeck1, Abdul Basit6, Paul Bentley7, Liang Chen8,7, Daan Christiaens9,10, Francis Dutil11, Karl Egger12, Chaolu Feng13, Ben Glocker8, Michael Götz14, Tom Haeck9,10, Hanna-Leena Halme15,16, Mohammad Havaei11, Khan M Iftekharuddin17, Pierre-Marc Jodoin11, Konstantinos Kamnitsas8, Elias Kellner18, Antti Korvenoja15, Hugo Larochelle11, Christian Ledig8, Jia-Hong Lee19, Frederik Maes9,10, Qaiser Mahmood20,6, Klaus H Maier-Hein14, Richard McKinley21, John Muschelli22, Chris Pal23, Linmin Pei17, Janaki Raman Rangarajan9,10, Syed M S Reza17, David Robben9,10, Daniel Rueckert8, Eero Salli15, Paul Suetens9,10, Ching-Wei Wang19, Matthias Wilms2, Jan S Kirschke24, Ulrike M Kr Amer5,25, Thomas F Münte5, Peter Schramm26, Roland Wiest21.   

Abstract

Ischemic stroke is the most common cerebrovascular disease, and its diagnosis, treatment, and study relies on non-invasive imaging. Algorithms for stroke lesion segmentation from magnetic resonance imaging (MRI) volumes are intensely researched, but the reported results are largely incomparable due to different datasets and evaluation schemes. We approached this urgent problem of comparability with the Ischemic Stroke Lesion Segmentation (ISLES) challenge organized in conjunction with the MICCAI 2015 conference. In this paper we propose a common evaluation framework, describe the publicly available datasets, and present the results of the two sub-challenges: Sub-Acute Stroke Lesion Segmentation (SISS) and Stroke Perfusion Estimation (SPES). A total of 16 research groups participated with a wide range of state-of-the-art automatic segmentation algorithms. A thorough analysis of the obtained data enables a critical evaluation of the current state-of-the-art, recommendations for further developments, and the identification of remaining challenges. The segmentation of acute perfusion lesions addressed in SPES was found to be feasible. However, algorithms applied to sub-acute lesion segmentation in SISS still lack accuracy. Overall, no algorithmic characteristic of any method was found to perform superior to the others. Instead, the characteristics of stroke lesion appearances, their evolution, and the observed challenges should be studied in detail. The annotated ISLES image datasets continue to be publicly available through an online evaluation system to serve as an ongoing benchmarking resource (www.isles-challenge.org).
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Benchmark; Challenge; Comparison; Ischemic stroke; MRI; Segmentation

Mesh:

Year:  2016        PMID: 27475911      PMCID: PMC5099118          DOI: 10.1016/j.media.2016.07.009

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


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