Literature DB >> 30099076

Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images.

Aaron Carass1, Jennifer L Cuzzocreo2, Shuo Han3, Carlos R Hernandez-Castillo4, Paul E Rasser5, Melanie Ganz6, Vincent Beliveau7, Jose Dolz8, Ismail Ben Ayed8, Christian Desrosiers8, Benjamin Thyreau9, José E Romero10, Pierrick Coupé11, José V Manjón10, Vladimir S Fonov12, D Louis Collins12, Sarah H Ying13, Chiadi U Onyike14, Deana Crocetti15, Bennett A Landman16, Stewart H Mostofsky17, Paul M Thompson18, Jerry L Prince19.   

Abstract

The human cerebellum plays an essential role in motor control, is involved in cognitive function (i.e., attention, working memory, and language), and helps to regulate emotional responses. Quantitative in-vivo assessment of the cerebellum is important in the study of several neurological diseases including cerebellar ataxia, autism, and schizophrenia. Different structural subdivisions of the cerebellum have been shown to correlate with differing pathologies. To further understand these pathologies, it is helpful to automatically parcellate the cerebellum at the highest fidelity possible. In this paper, we coordinated with colleagues around the world to evaluate automated cerebellum parcellation algorithms on two clinical cohorts showing that the cerebellum can be parcellated to a high accuracy by newer methods. We characterize these various methods at four hierarchical levels: coarse (i.e., whole cerebellum and gross structures), lobe, subdivisions of the vermis, and the lobules. Due to the number of labels, the hierarchy of labels, the number of algorithms, and the two cohorts, we have restricted our analyses to the Dice measure of overlap. Under these conditions, machine learning based methods provide a collection of strategies that are efficient and deliver parcellations of a high standard across both cohorts, surpassing previous work in the area. In conjunction with the rank-sum computation, we identified an overall winning method.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Attention deficit hyperactivity disorder; Autism; Cerebellar ataxia; Magnetic resonance imaging

Mesh:

Year:  2018        PMID: 30099076      PMCID: PMC6271471          DOI: 10.1016/j.neuroimage.2018.08.003

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  119 in total

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