Literature DB >> 27458072

Consensus of classification trees for skin sensitisation hazard prediction.

D Asturiol1, S Casati2, A Worth2.   

Abstract

Since March 2013, it is no longer possible to market in the European Union (EU) cosmetics containing new ingredients tested on animals. Although several in silico alternatives are available and achievements have been made in the development and regulatory adoption of skin sensitisation non-animal tests, there is not yet a generally accepted approach for skin sensitisation assessment that would fully substitute the need for animal testing. The aim of this work was to build a defined approach (i.e. a predictive model based on readouts from various information sources that uses a fixed procedure for generating a prediction) for skin sensitisation hazard prediction (sensitiser/non-sensitiser) using Local Lymph Node Assay (LLNA) results as reference classifications. To derive the model, we built a dataset with high quality data from in chemico (DPRA) and in vitro (KeratinoSens™ and h-CLAT) methods, and it was complemented with predictions from several software packages. The modelling exercise showed that skin sensitisation hazard was better predicted by classification trees based on in silico predictions. The defined approach consists of a consensus of two classification trees that are based on descriptors that account for protein reactivity and structural features. The model showed an accuracy of 0.93, sensitivity of 0.98, and specificity of 0.85 for 269 chemicals. In addition, the defined approach provides a measure of confidence associated to the prediction.
Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

Keywords:  Decision tree; In silico; In vitro; Prediction; QSAR; Skin sensitisation

Mesh:

Substances:

Year:  2016        PMID: 27458072     DOI: 10.1016/j.tiv.2016.07.014

Source DB:  PubMed          Journal:  Toxicol In Vitro        ISSN: 0887-2333            Impact factor:   3.500


  6 in total

1.  Tri-culture system for pro-hapten sensitizer identification and potency classification.

Authors:  Serom Lee; Talia Greenstein; Lingting Shi; Tim Maguire; Rene Schloss; Martin Yarmush
Journal:  Technology (Singap World Sci)       Date:  2018-06-29

2.  Evaluating Confidence in Toxicity Assessments Based on Experimental Data and In Silico Predictions.

Authors:  Candice Johnson; Lennart T Anger; Romualdo Benigni; David Bower; Frank Bringezu; Kevin M Crofton; Mark T D Cronin; Kevin P Cross; Magdalena Dettwiler; Markus Frericks; Fjodor Melnikov; Scott Miller; David W Roberts; Diana Suarez-Rodriguez; Alessandra Roncaglioni; Elena Lo Piparo; Raymond R Tice; Craig Zwickl; Glenn J Myatt
Journal:  Comput Toxicol       Date:  2021-11-08

Review 3.  Non-animal methods to predict skin sensitization (II): an assessment of defined approaches *.

Authors:  Nicole C Kleinstreuer; Sebastian Hoffmann; Nathalie Alépée; David Allen; Takao Ashikaga; Warren Casey; Elodie Clouet; Magalie Cluzel; Bertrand Desprez; Nichola Gellatly; Carsten Göbel; Petra S Kern; Martina Klaric; Jochen Kühnl; Silvia Martinozzi-Teissier; Karsten Mewes; Masaaki Miyazawa; Judy Strickland; Erwin van Vliet; Qingda Zang; Dirk Petersohn
Journal:  Crit Rev Toxicol       Date:  2018-02-23       Impact factor: 5.635

Review 4.  Skin Sensitization Testing-What's Next?

Authors:  Gunilla Grundström; Carl A K Borrebaeck
Journal:  Int J Mol Sci       Date:  2019-02-04       Impact factor: 5.923

5.  Consensus versus Individual QSARs in Classification: Comparison on a Large-Scale Case Study.

Authors:  Cecile Valsecchi; Francesca Grisoni; Viviana Consonni; Davide Ballabio
Journal:  J Chem Inf Model       Date:  2020-03-02       Impact factor: 4.956

6.  QSAR models of human data can enrich or replace LLNA testing for human skin sensitization.

Authors:  Vinicius M Alves; Stephen J Capuzzi; Eugene Muratov; Rodolpho C Braga; Thomas Thornton; Denis Fourches; Judy Strickland; Nicole Kleinstreuer; Carolina H Andrade; Alexander Tropsha
Journal:  Green Chem       Date:  2016-10-06       Impact factor: 10.182

  6 in total

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