Literature DB >> 27381245

Mechanistic insights into selective autophagy pathways: lessons from yeast.

Jean-Claude Farré1, Suresh Subramani1.   

Abstract

Autophagy has burgeoned rapidly as a field of study because of its evolutionary conservation, the diversity of intracellular cargoes degraded and recycled by this machinery, the mechanisms involved, as well as its physiological relevance to human health and disease. This self-eating process was initially viewed as a non-selective mechanism used by eukaryotic cells to degrade and recycle macromolecules in response to stress; we now know that various cellular constituents, as well as pathogens, can also undergo selective autophagy. In contrast to non-selective autophagy, selective autophagy pathways rely on a plethora of selective autophagy receptors (SARs) that recognize and direct intracellular protein aggregates, organelles and pathogens for specific degradation. Although SARs themselves are not highly conserved, their modes of action and the signalling cascades that activate and regulate them are. Recent yeast studies have provided novel mechanistic insights into selective autophagy pathways, revealing principles of how various cargoes can be marked and targeted for selective degradation.

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Year:  2016        PMID: 27381245      PMCID: PMC5549613          DOI: 10.1038/nrm.2016.74

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  168 in total

1.  Apg13p and Vac8p are part of a complex of phosphoproteins that are required for cytoplasm to vacuole targeting.

Authors:  S V Scott; D C Nice; J J Nau; L S Weisman; Y Kamada; I Keizer-Gunnink; T Funakoshi; M Veenhuis; Y Ohsumi; D J Klionsky
Journal:  J Biol Chem       Date:  2000-08-18       Impact factor: 5.157

2.  Midbody ring disposal by autophagy is a post-abscission event of cytokinesis.

Authors:  Christian Pohl; Stefan Jentsch
Journal:  Nat Cell Biol       Date:  2008-12-14       Impact factor: 28.824

Review 3.  Something old, something new: plant innate immunity and autophagy.

Authors:  Montrell Seay; Andrew P Hayward; Jeffrey Tsao; S P Dinesh-Kumar
Journal:  Curr Top Microbiol Immunol       Date:  2009       Impact factor: 4.291

4.  Mitochondria-anchored receptor Atg32 mediates degradation of mitochondria via selective autophagy.

Authors:  Koji Okamoto; Noriko Kondo-Okamoto; Yoshinori Ohsumi
Journal:  Dev Cell       Date:  2009-07       Impact factor: 12.270

Review 5.  Chaperone-mediated autophagy: molecular mechanisms and physiological relevance.

Authors:  Samantha J Orenstein; Ana Maria Cuervo
Journal:  Semin Cell Dev Biol       Date:  2010-02-20       Impact factor: 7.727

6.  Hierarchy of Atg proteins in pre-autophagosomal structure organization.

Authors:  Kuninori Suzuki; Yuka Kubota; Takayuki Sekito; Yoshinori Ohsumi
Journal:  Genes Cells       Date:  2007-02       Impact factor: 1.891

7.  A new class of ubiquitin-Atg8 receptors involved in selective autophagy and polyQ protein clearance.

Authors:  Kefeng Lu; Ivan Psakhye; Stefan Jentsch
Journal:  Autophagy       Date:  2014       Impact factor: 16.016

8.  Recruitment of Atg9 to the preautophagosomal structure by Atg11 is essential for selective autophagy in budding yeast.

Authors:  Congcong He; Hui Song; Tomohiro Yorimitsu; Iryna Monastyrska; Wei-Lien Yen; Julie E Legakis; Daniel J Klionsky
Journal:  J Cell Biol       Date:  2006-12-18       Impact factor: 10.539

Review 9.  The role of autophagy in intracellular pathogen nutrient acquisition.

Authors:  Shaun Steele; Jason Brunton; Thomas Kawula
Journal:  Front Cell Infect Microbiol       Date:  2015-06-09       Impact factor: 5.293

10.  Huntingtin functions as a scaffold for selective macroautophagy.

Authors:  Yan-Ning Rui; Zhen Xu; Bindi Patel; Zhihua Chen; Dongsheng Chen; Antonio Tito; Gabriela David; Yamin Sun; Erin F Stimming; Hugo J Bellen; Ana Maria Cuervo; Sheng Zhang
Journal:  Nat Cell Biol       Date:  2015-02-16       Impact factor: 28.824

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  124 in total

Review 1.  Mechanistic Insights into the Role of Atg11 in Selective Autophagy.

Authors:  Katarzyna Zientara-Rytter; Suresh Subramani
Journal:  J Mol Biol       Date:  2019-06-22       Impact factor: 5.469

Review 2.  Cellular Metabolism and Aging.

Authors:  Andre Catic
Journal:  Prog Mol Biol Transl Sci       Date:  2018-02-01       Impact factor: 3.622

3.  The Autophagy-Related Beclin-1 Protein Requires the Coiled-Coil and BARA Domains To Form a Homodimer with Submicromolar Affinity.

Authors:  Matthew J Ranaghan; Michael A Durney; Michael F Mesleh; Patrick R McCarren; Colin W Garvie; Douglas S Daniels; Kimberly L Carey; Adam P Skepner; Beth Levine; Jose R Perez
Journal:  Biochemistry       Date:  2017-12-14       Impact factor: 3.162

Review 4.  Peroxisome biogenesis, membrane contact sites, and quality control.

Authors:  Jean-Claude Farré; Shanmuga S Mahalingam; Marco Proietto; Suresh Subramani
Journal:  EMBO Rep       Date:  2018-12-10       Impact factor: 8.807

Review 5.  Implications of autophagy on arbovirus infection of mosquitoes.

Authors:  Doug E Brackney
Journal:  Curr Opin Insect Sci       Date:  2017-05-06       Impact factor: 5.186

Review 6.  Molecular definitions of autophagy and related processes.

Authors:  Lorenzo Galluzzi; Eric H Baehrecke; Andrea Ballabio; Patricia Boya; José Manuel Bravo-San Pedro; Francesco Cecconi; Augustine M Choi; Charleen T Chu; Patrice Codogno; Maria Isabel Colombo; Ana Maria Cuervo; Jayanta Debnath; Vojo Deretic; Ivan Dikic; Eeva-Liisa Eskelinen; Gian Maria Fimia; Simone Fulda; David A Gewirtz; Douglas R Green; Malene Hansen; J Wade Harper; Marja Jäättelä; Terje Johansen; Gabor Juhasz; Alec C Kimmelman; Claudine Kraft; Nicholas T Ktistakis; Sharad Kumar; Beth Levine; Carlos Lopez-Otin; Frank Madeo; Sascha Martens; Jennifer Martinez; Alicia Melendez; Noboru Mizushima; Christian Münz; Leon O Murphy; Josef M Penninger; Mauro Piacentini; Fulvio Reggiori; David C Rubinsztein; Kevin M Ryan; Laura Santambrogio; Luca Scorrano; Anna Katharina Simon; Hans-Uwe Simon; Anne Simonsen; Nektarios Tavernarakis; Sharon A Tooze; Tamotsu Yoshimori; Junying Yuan; Zhenyu Yue; Qing Zhong; Guido Kroemer
Journal:  EMBO J       Date:  2017-06-08       Impact factor: 11.598

Review 7.  Activating autophagy to potentiate immunogenic chemotherapy and radiation therapy.

Authors:  Lorenzo Galluzzi; José Manuel Bravo-San Pedro; Sandra Demaria; Silvia Chiara Formenti; Guido Kroemer
Journal:  Nat Rev Clin Oncol       Date:  2016-11-15       Impact factor: 66.675

8.  Gyp1 has a dual function as Ypt1 GAP and interaction partner of Atg8 in selective autophagy.

Authors:  Anne Lisa Mitter; Petra Schlotterhose; Roswitha Krick
Journal:  Autophagy       Date:  2019-01-27       Impact factor: 16.016

9.  Pex3 confines pexophagy receptor activity of Atg36 to peroxisomes by regulating Hrr25-mediated phosphorylation and proteasomal degradation.

Authors:  Sota Meguro; Xizhen Zhuang; Hiromi Kirisako; Hitoshi Nakatogawa
Journal:  J Biol Chem       Date:  2020-09-21       Impact factor: 5.157

Review 10.  Autophagy as a regulator of cardiovascular redox homeostasis.

Authors:  Ye Yan; Toren Finkel
Journal:  Free Radic Biol Med       Date:  2016-12-07       Impact factor: 7.376

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