Literature DB >> 27369780

Structure/function correlations over binuclear non-heme iron active sites.

Edward I Solomon1, Kiyoung Park2.   

Abstract

Binuclear non-heme iron enzymes activate O2 to perform diverse chemistries. Three different structural mechanisms of O2 binding to a coupled binuclear iron site have been identified utilizing variable-temperature, variable-field magnetic circular dichroism spectroscopy (VTVH MCD). For the μ-OH-bridged Fe(II)2 site in hemerythrin, O2 binds terminally to a five-coordinate Fe(II) center as hydroperoxide with the proton deriving from the μ-OH bridge and the second electron transferring through the resulting μ-oxo superexchange pathway from the second coordinatively saturated Fe(II) center in a proton-coupled electron transfer process. For carboxylate-only-bridged Fe(II)2 sites, O2 binding as a bridged peroxide requires both Fe(II) centers to be coordinatively unsaturated and has good frontier orbital overlap with the two orthogonal O2 π* orbitals to form peroxo-bridged Fe(III)2 intermediates. Alternatively, carboxylate-only-bridged Fe(II)2 sites with only a single open coordination position on an Fe(II) enable the one-electron formation of Fe(III)-O2 (-) or Fe(III)-NO(-) species. Finally, for the peroxo-bridged Fe(III)2 intermediates, further activation is necessary for their reactivities in one-electron reduction and electrophilic aromatic substitution, and a strategy consistent with existing spectral data is discussed.

Entities:  

Keywords:  Binuclear non-heme iron enzymes; Frontier molecular orbitals; O2 activation; Peroxide activation; Variable-temperature, variable-field magnetic circular dichroism

Mesh:

Substances:

Year:  2016        PMID: 27369780      PMCID: PMC5010389          DOI: 10.1007/s00775-016-1372-9

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  95 in total

1.  (Mu-1,2-peroxo)diiron(III/III) complex as a precursor to the diiron(III/IV) intermediate X in the assembly of the iron-radical cofactor of ribonucleotide reductase from mouse.

Authors:  Danny Yun; Ricardo García-Serres; Brandon M Chicalese; Young H An; Boi Hanh Huynh; J Martin Bollinger
Journal:  Biochemistry       Date:  2007-01-27       Impact factor: 3.162

Review 2.  Cyanobacterial alkane biosynthesis further expands the catalytic repertoire of the ferritin-like 'di-iron-carboxylate' proteins.

Authors:  Carsten Krebs; J Martin Bollinger; Squire J Booker
Journal:  Curr Opin Chem Biol       Date:  2011-04       Impact factor: 8.822

3.  Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase.

Authors:  J Baldwin; W C Voegtli; N Khidekel; P Moënne-Loccoz; C Krebs; A S Pereira; B A Ley; B H Huynh; T M Loehr; P J Riggs-Gelasco; A C Rosenzweig; J M Bollinger
Journal:  J Am Chem Soc       Date:  2001-07-25       Impact factor: 15.419

4.  Evidence for C-H cleavage by an iron-superoxide complex in the glycol cleavage reaction catalyzed by myo-inositol oxygenase.

Authors:  Gang Xing; Yinghui Diao; Lee M Hoffart; Eric W Barr; K Sandeep Prabhu; Ryan J Arner; C Channa Reddy; Carsten Krebs; J Martin Bollinger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-10       Impact factor: 11.205

Review 5.  Dioxygen activation in soluble methane monooxygenase.

Authors:  Christine E Tinberg; Stephen J Lippard
Journal:  Acc Chem Res       Date:  2011-03-10       Impact factor: 22.384

6.  Use of a chemical trigger for electron transfer to characterize a precursor to cluster X in assembly of the iron-radical cofactor of Escherichia coli ribonucleotide reductase.

Authors:  Lana Saleh; Carsten Krebs; Brenda A Ley; Sunail Naik; Boi Hanh Huynh; J Martin Bollinger
Journal:  Biochemistry       Date:  2004-05-25       Impact factor: 3.162

7.  Revisiting the mechanism of dioxygen activation in soluble methane monooxygenase from M. capsulatus (Bath): evidence for a multi-step, proton-dependent reaction pathway.

Authors:  Christine E Tinberg; Stephen J Lippard
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

8.  CD and MCD studies of the effects of component B variant binding on the biferrous active site of methane monooxygenase.

Authors:  Natasa Mitić; Jennifer K Schwartz; Brian J Brazeau; John D Lipscomb; Edward I Solomon
Journal:  Biochemistry       Date:  2008-07-16       Impact factor: 3.162

9.  Spectroscopic and electronic structure studies of intermediate X in ribonucleotide reductase R2 and two variants: a description of the FeIV-oxo bond in the FeIII-O-FeIV dimer.

Authors:  Natasa Mitić; Michael D Clay; Lana Saleh; J Martin Bollinger; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-06-29       Impact factor: 15.419

10.  Electronic and spectroscopic studies of the non-heme reduced binuclear iron sites of two ribonucleotide reductase variants: comparison to reduced methane monooxygenase and contributions to O2 reactivity.

Authors:  Pin-Pin Wei; Andrew J Skulan; Natasa Mitić; Yi-Shan Yang; Lana Saleh; J Martin Bollinger; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2004-03-31       Impact factor: 15.419

View more
  10 in total

Review 1.  Dioxygen Activation by Nonheme Diiron Enzymes: Diverse Dioxygen Adducts, High-Valent Intermediates, and Related Model Complexes.

Authors:  Andrew J Jasniewski; Lawrence Que
Journal:  Chem Rev       Date:  2018-02-05       Impact factor: 60.622

2.  In-crystal reaction cycle of a toluene-bound diiron hydroxylase.

Authors:  Justin F Acheson; Lucas J Bailey; Thomas C Brunold; Brian G Fox
Journal:  Nature       Date:  2017-03-27       Impact factor: 49.962

3.  Spectroscopy and DFT Calculations of a Flavo-diiron Enzyme Implicate New Diiron Site Structures.

Authors:  Andrew C Weitz; Nitai Giri; Jonathan D Caranto; Donald M Kurtz; Emile L Bominaar; Michael P Hendrich
Journal:  J Am Chem Soc       Date:  2017-08-16       Impact factor: 15.419

4.  Structure, function and evolution of the hemerythrin-like domain superfamily.

Authors:  Claudia Alvarez-Carreño; Vikram Alva; Arturo Becerra; Antonio Lazcano
Journal:  Protein Sci       Date:  2018-01-30       Impact factor: 6.725

5.  Peroxide Activation for Electrophilic Reactivity by the Binuclear Non-heme Iron Enzyme AurF.

Authors:  Kiyoung Park; Ning Li; Yeonju Kwak; Martin Srnec; Caleb B Bell; Lei V Liu; Shaun D Wong; Yoshitaka Yoda; Shinji Kitao; Makoto Seto; Michael Hu; Jiyong Zhao; Carsten Krebs; J Martin Bollinger; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2017-05-10       Impact factor: 15.419

Review 6.  Diiron monooxygenases in natural product biosynthesis.

Authors:  Anna J Komor; Andrew J Jasniewski; Lawrence Que; John D Lipscomb
Journal:  Nat Prod Rep       Date:  2018-07-18       Impact factor: 13.423

7.  A Peroxodiiron(III/III) Intermediate Mediating Both N-Hydroxylation Steps in Biosynthesis of the N-Nitrosourea Pharmacophore of Streptozotocin by the Multi-domain Metalloenzyme SznF.

Authors:  Molly J McBride; Debangsu Sil; Tai L Ng; Anne Marie Crooke; Grace E Kenney; Christina R Tysoe; Bo Zhang; Emily P Balskus; Amie K Boal; Carsten Krebs; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2020-06-24       Impact factor: 15.419

8.  Nuclear Resonance Vibrational Spectroscopic Definition of the Fe(IV)2 Intermediate Q in Methane Monooxygenase and Its Reactivity.

Authors:  Ariel Benjamin Jacobs; Rahul Banerjee; Dory Ellen Deweese; Augustin Braun; Jeffrey Thomas Babicz; Leland Bruce Gee; Kyle David Sutherlin; Lars Hendrik Böttger; Yoshitaka Yoda; Makina Saito; Shinji Kitao; Yasuhiro Kobayashi; Makoto Seto; Kenji Tamasaku; John D Lipscomb; Kiyoung Park; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2021-09-27       Impact factor: 15.419

9.  Ligand-Constraint-Induced Peroxide Activation for Electrophilic Reactivity.

Authors:  Anirban Chandra; Mursaleem Ansari; Inés Monte-Pérez; Subrata Kundu; Gopalan Rajaraman; Kallol Ray
Journal:  Angew Chem Int Ed Engl       Date:  2021-05-28       Impact factor: 15.336

10.  Generation of a μ-1,2-hydroperoxo FeIIIFeIII and a μ-1,2-peroxo FeIVFeIII Complex.

Authors:  Stephan Walleck; Thomas Philipp Zimmermann; Henning Hachmeister; Christian Pilger; Thomas Huser; Sagie Katz; Peter Hildebrandt; Anja Stammler; Hartmut Bögge; Eckhard Bill; Thorsten Glaser
Journal:  Nat Commun       Date:  2022-03-16       Impact factor: 14.919

  10 in total

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