Literature DB >> 18982614

Assessment of reliability of multi-site neuroimaging via traveling phantom study.

Sylvain Gouttard1, Martin Styner, Marcel Prastawa, Joseph Piven, Guido Gerig.   

Abstract

This paper describes a framework for quantitative analysis of neuroimaging data of traveling human phantoms used for cross-site validation. We focus on the analysis of magnetic resonance image data including intra- and inter-site comparison. Locations and magnitude of geometric deformation is studied via unbiased atlas building and metrics on deformation fields. Variability of tissue segmentation is analyzed by comparison of volumes, overlap of tissue maps, and a new Kullback-Leibler divergence on tissue probabilities, with emphasis on comparing probabilistic rather than binary segmentations. We show that results from this information theoretic measure are highly correlated with overlap. Reproducibility of automatic, atlas-based segmentation of subcortical structures is examined by comparison of volumes, shape overlap and surface distances. Variability among scanners of the same type but also differences to a different scanner type are discussed. The results demonstrate excellent reliability across multiple sites that can be achieved by the use of the today's scanner generation and powerful automatic analysis software. Knowledge about such variability is crucial for study design and power analysis in new multi-site clinical studies.

Entities:  

Mesh:

Year:  2008        PMID: 18982614      PMCID: PMC2758043          DOI: 10.1007/978-3-540-85990-1_32

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  8 in total

1.  Automated model-based tissue classification of MR images of the brain.

Authors:  K Van Leemput; F Maes; D Vandermeulen; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

2.  A fully automatic and robust brain MRI tissue classification method.

Authors:  Chris A Cocosco; Alex P Zijdenbos; Alan C Evans
Journal:  Med Image Anal       Date:  2003-12       Impact factor: 8.545

3.  HAMMER: hierarchical attribute matching mechanism for elastic registration.

Authors:  Dinggang Shen; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2002-11       Impact factor: 10.048

4.  A hierarchical algorithm for MR brain image parcellation.

Authors:  Kilian M Pohl; Sylvain Bouix; Motoaki Nakamura; Torsten Rohlfing; Robert W McCarley; Ron Kikinis; W Eric L Grimson; Martha E Shenton; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2007-09       Impact factor: 10.048

5.  Atlas renormalization for improved brain MR image segmentation across scanner platforms.

Authors:  Xiao Han; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

6.  Deformable templates using large deformation kinematics.

Authors:  G E Christensen; R D Rabbitt; M I Miller
Journal:  IEEE Trans Image Process       Date:  1996       Impact factor: 10.856

7.  Adaptive segmentation of MRI data.

Authors:  W M Wells; W L Grimson; R Kikinis; F A Jolesz
Journal:  IEEE Trans Med Imaging       Date:  1996       Impact factor: 10.048

8.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

  8 in total
  20 in total

1.  Altered corpus callosum morphology associated with autism over the first 2 years of life.

Authors:  Jason J Wolff; Guido Gerig; John D Lewis; Takahiro Soda; Martin A Styner; Clement Vachet; Kelly N Botteron; Jed T Elison; Stephen R Dager; Annette M Estes; Heather C Hazlett; Robert T Schultz; Lonnie Zwaigenbaum; Joseph Piven
Journal:  Brain       Date:  2015-05-03       Impact factor: 13.501

2.  Differences in white matter fiber tract development present from 6 to 24 months in infants with autism.

Authors:  Jason J Wolff; Hongbin Gu; Guido Gerig; Jed T Elison; Martin Styner; Sylvain Gouttard; Kelly N Botteron; Stephen R Dager; Geraldine Dawson; Annette M Estes; Alan C Evans; Heather C Hazlett; Penelope Kostopoulos; Robert C McKinstry; Sarah J Paterson; Robert T Schultz; Lonnie Zwaigenbaum; Joseph Piven
Journal:  Am J Psychiatry       Date:  2012-06       Impact factor: 18.112

3.  Sex differences associated with corpus callosum development in human infants: A longitudinal multimodal imaging study.

Authors:  Astrid Schmied; Takahiro Soda; Guido Gerig; Martin Styner; Meghan R Swanson; Jed T Elison; Mark D Shen; Robert C McKinstry; John R Pruett; Kelly N Botteron; Annette M Estes; Stephen R Dager; Heather C Hazlett; Robert T Schultz; Joseph Piven; Jason J Wolff
Journal:  Neuroimage       Date:  2020-04-07       Impact factor: 6.556

4.  Development of cortical shape in the human brain from 6 to 24months of age via a novel measure of shape complexity.

Authors:  Sun Hyung Kim; Ilwoo Lyu; Vladimir S Fonov; Clement Vachet; Heather C Hazlett; Rachel G Smith; Joseph Piven; Stephen R Dager; Robert C Mckinstry; John R Pruett; Alan C Evans; D Louis Collins; Kelly N Botteron; Robert T Schultz; Guido Gerig; Martin A Styner
Journal:  Neuroimage       Date:  2016-05-03       Impact factor: 6.556

5.  Brain volume findings in 6-month-old infants at high familial risk for autism.

Authors:  Heather Cody Hazlett; Hongbin Gu; Robert C McKinstry; Dennis W W Shaw; Kelly N Botteron; Stephen R Dager; Martin Styner; Clement Vachet; Guido Gerig; Sarah J Paterson; Robert T Schultz; Annette M Estes; Alan C Evans; Joseph Piven
Journal:  Am J Psychiatry       Date:  2012-06       Impact factor: 18.112

6.  A framework for the analysis of phantom data in multicenter diffusion tensor imaging studies.

Authors:  Lindsay Walker; Michael Curry; Amritha Nayak; Nicholas Lange; Carlo Pierpaoli
Journal:  Hum Brain Mapp       Date:  2012-03-28       Impact factor: 5.038

7.  Splenium development and early spoken language in human infants.

Authors:  Meghan R Swanson; Jason J Wolff; Jed T Elison; Hongbin Gu; Heather C Hazlett; Kelly Botteron; Martin Styner; Sarah Paterson; Guido Gerig; John Constantino; Stephen Dager; Annette Estes; Clement Vachet; Joseph Piven
Journal:  Dev Sci       Date:  2015-10-21

8.  Longitudinal modeling of appearance and shape and its potential for clinical use.

Authors:  Guido Gerig; James Fishbaugh; Neda Sadeghi
Journal:  Med Image Anal       Date:  2016-06-15       Impact factor: 8.545

9.  Reliability of neuroanatomical measurements in a multisite longitudinal study of youth at risk for psychosis.

Authors:  Tyrone D Cannon; Frank Sun; Sarah Jacobson McEwen; Xenophon Papademetris; George He; Theo G M van Erp; Aron Jacobson; Carrie E Bearden; Elaine Walker; Xiaoping Hu; Lei Zhou; Larry J Seidman; Heidi W Thermenos; Barbara Cornblatt; Doreen M Olvet; Diana Perkins; Aysenil Belger; Kristin Cadenhead; Ming Tsuang; Heline Mirzakhanian; Jean Addington; Richard Frayne; Scott W Woods; Thomas H McGlashan; R Todd Constable; Maolin Qiu; Daniel H Mathalon; Paul Thompson; Arthur W Toga
Journal:  Hum Brain Mapp       Date:  2013-08-24       Impact factor: 5.038

Review 10.  Magnetic resonance imaging striatal volumes: a biomarker for clinical trials in Huntington's disease.

Authors:  Elizabeth H Aylward
Journal:  Mov Disord       Date:  2014-08-27       Impact factor: 10.338

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