Literature DB >> 27285057

Multi-domain terpenoid cyclase architecture and prospects for proximity in bifunctional catalysis.

Mengbin Chen1, Golda G Harris1, Travis A Pemberton1, David W Christianson2.   

Abstract

Crystal structures of terpenoid cyclases reveal assemblies of three basic domains designated α, β, and γ. While the biosynthesis of cyclic monoterpenes (C10) and sesquiterpenes (C15) most often involves enzymes with α or αβ domain architecture, the biosynthesis of cyclic diterpenes (C20), sesterterpenes (C25), and triterpenes (C30) can involve enzymes with α, αα, βγ, or αβγ domain architecture. Indeed, some enzymes of terpenoid biosynthesis are bifunctional, with distinct active sites that catalyze sequential reactions. Interestingly, some of these enzymes oligomerize to form dimers, tetramers, and hexamers. Not only can such assemblies enable enzyme regulation by allostery, but they can also provide a modest enhancement of terpenoid product flux through proximity channeling or cluster channeling. The mixing and matching of functional terpenoid cyclase domains through tertiary and/or quaternary structure may also comprise an evolutionary strategy for facile product diversification.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27285057      PMCID: PMC5143216          DOI: 10.1016/j.sbi.2016.05.010

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  60 in total

Review 1.  The molecular basis of substrate channeling.

Authors:  E W Miles; S Rhee; D R Davies
Journal:  J Biol Chem       Date:  1999-04-30       Impact factor: 5.157

2.  Enzyme Mechanisms for Polycyclic Triterpene Formation.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-08-18       Impact factor: 15.336

Review 3.  Spatial organization of enzymes for metabolic engineering.

Authors:  Hanson Lee; William C DeLoache; John E Dueber
Journal:  Metab Eng       Date:  2011-09-18       Impact factor: 9.783

4.  Trinuclear Metal Clusters in Catalysis by Terpenoid Synthases.

Authors:  Julie A Aaron; David W Christianson
Journal:  Pure Appl Chem       Date:  2010       Impact factor: 2.453

5.  Properties of Kaurene Synthetase from Marah macrocarpus Endosperm: Evidence for the Participation of Separate but Interacting Enzymes.

Authors:  J D Duncan; C A West
Journal:  Plant Physiol       Date:  1981-11       Impact factor: 8.340

Review 6.  Terpene biosynthesis: modularity rules.

Authors:  Eric Oldfield; Fu-Yang Lin
Journal:  Angew Chem Int Ed Engl       Date:  2011-11-21       Impact factor: 15.336

7.  Fusicoccin-A selectively induces apoptosis in tumor cells after interferon-alpha priming.

Authors:  Ingrid J de Vries-van Leeuwen; Chantal Kortekaas-Thijssen; Jean A Nzigou Mandouckou; Sjors Kas; Antonio Evidente; Albertus H de Boer
Journal:  Cancer Lett       Date:  2010-02-13       Impact factor: 8.679

8.  Identification of ophiobolin F synthase by a genome mining approach: a sesterterpene synthase from Aspergillus clavatus.

Authors:  Ryota Chiba; Atsushi Minami; Katsuya Gomi; Hideaki Oikawa
Journal:  Org Lett       Date:  2013-01-16       Impact factor: 6.005

9.  Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with αα Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.

Authors:  Golda G Harris; Patrick M Lombardi; Travis A Pemberton; Tsutomu Matsui; Thomas M Weiss; Kathryn E Cole; Mustafa Köksal; Frank V Murphy; L Sangeetha Vedula; Wayne K W Chou; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2015-11-24       Impact factor: 3.162

10.  Identification of diterpene biosynthetic gene clusters and functional analysis of labdane-related diterpene cyclases in Phomopsis amygdali.

Authors:  Tomonobu Toyomasu; Rie Niida; Hiromichi Kenmoku; Yuri Kanno; Shigeyoshi Miura; Chiaki Nakano; Yoshihito Shiono; Wataru Mitsuhashi; Hiroaki Toshima; Hideaki Oikawa; Tsutomu Hoshino; Tohru Dairi; Nobuo Kato; Takeshi Sassa
Journal:  Biosci Biotechnol Biochem       Date:  2008-04-07       Impact factor: 2.043

View more
  13 in total

1.  Structure of Sesquisabinene Synthase 1, a Terpenoid Cyclase That Generates a Strained [3.1.0] Bridged-Bicyclic Product.

Authors:  Patrick N Blank; Stephen A Shinsky; David W Christianson
Journal:  ACS Chem Biol       Date:  2019-04-17       Impact factor: 5.100

2.  Exploring the Influence of Domain Architecture on the Catalytic Function of Diterpene Synthases.

Authors:  Travis A Pemberton; Mengbin Chen; Golda G Harris; Wayne K W Chou; Lian Duan; Mustafa Köksal; Alex S Genshaft; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2017-03-31       Impact factor: 3.162

3.  Structure of the Repurposed Fungal Terpene Cyclase FlvF Implicated in the C-N Bond-Forming Reaction of Flavunoidine Biosynthesis.

Authors:  Margarita A Tararina; Danielle A Yee; Yi Tang; David W Christianson
Journal:  Biochemistry       Date:  2022-08-29       Impact factor: 3.321

4.  Discovery of non-squalene triterpenes.

Authors:  Hui Tao; Lukas Lauterbach; Guangkai Bian; Rong Chen; Anwei Hou; Takahiro Mori; Shu Cheng; Ben Hu; Li Lu; Xin Mu; Min Li; Naruhiko Adachi; Masato Kawasaki; Toshio Moriya; Toshiya Senda; Xinghuan Wang; Zixin Deng; Ikuro Abe; Jeroen S Dickschat; Tiangang Liu
Journal:  Nature       Date:  2022-06-01       Impact factor: 69.504

5.  Identification and Characterization of Bifunctional Drimenol Synthases of Marine Bacterial Origin.

Authors:  Nhu Ngoc Quynh Vo; Yuhta Nomura; Kiyomi Kinugasa; Hiroshi Takagi; Shunji Takahashi
Journal:  ACS Chem Biol       Date:  2022-04-21       Impact factor: 4.634

6.  Crystal Structure of Cucumene Synthase, a Terpenoid Cyclase That Generates a Linear Triquinane Sesquiterpene.

Authors:  Patrick N Blank; Travis A Pemberton; Jeng-Yeong Chow; C Dale Poulter; David W Christianson
Journal:  Biochemistry       Date:  2018-10-22       Impact factor: 3.162

7.  Higher-order oligomerization of a chimeric αβγ bifunctional diterpene synthase with prenyltransferase and class II cyclase activities is concentration-dependent.

Authors:  Trey A Ronnebaum; Kushol Gupta; David W Christianson
Journal:  J Struct Biol       Date:  2020-01-21       Impact factor: 2.867

8.  Substitution of Aromatic Residues with Polar Residues in the Active Site Pocket of epi-Isozizaene Synthase Leads to the Generation of New Cyclic Sesquiterpenes.

Authors:  Patrick N Blank; Golda H Barrow; Wayne K W Chou; Lian Duan; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2017-10-17       Impact factor: 3.162

9.  Structural insight on assembly-line catalysis in terpene biosynthesis.

Authors:  Jacque L Faylo; Trevor van Eeuwen; Hee Jong Kim; Jose J Gorbea Colón; Benjamin A Garcia; Kenji Murakami; David W Christianson
Journal:  Nat Commun       Date:  2021-06-09       Impact factor: 14.919

Review 10.  Assembly-Line Catalysis in Bifunctional Terpene Synthases.

Authors:  Jacque L Faylo; Trey A Ronnebaum; David W Christianson
Journal:  Acc Chem Res       Date:  2021-07-13       Impact factor: 24.466

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.