Literature DB >> 28362483

Exploring the Influence of Domain Architecture on the Catalytic Function of Diterpene Synthases.

Travis A Pemberton1, Mengbin Chen1, Golda G Harris1, Wayne K W Chou2, Lian Duan2, Mustafa Köksal1, Alex S Genshaft1, David E Cane2, David W Christianson1.   

Abstract

Terpenoid synthases catalyze isoprenoid cyclization reactions underlying the generation of more than 80,000 natural products. Such dramatic chemodiversity belies the fact that these enzymes generally consist of only three domain folds designated as α, β, and γ. Catalysis by class I terpenoid synthases occurs exclusively in the α domain, which is found with α, αα, αβ, and αβγ domain architectures. Here, we explore the influence of domain architecture on catalysis by taxadiene synthase from Taxus brevifolia (TbTS, αβγ), fusicoccadiene synthase from Phomopsis amygdali (PaFS, (αα)6), and ophiobolin F synthase from Aspergillus clavatus (AcOS, αα). We show that the cyclization fidelity and catalytic efficiency of the α domain of TbTS are severely compromised by deletion of the βγ domains; however, retention of the β domain preserves significant cyclization fidelity. In PaFS, we previously demonstrated that one α domain similarly influences catalysis by the other α domain [ Chen , M. , Chou , W. K. W. , Toyomasu , T. , Cane , D. E. , and Christianson , D. W. ( 2016 ) ACS Chem. Biol. 11 , 889 - 899 ]. Here, we show that the hexameric quaternary structure of PaFS enables cluster channeling. We also show that the α domains of PaFS and AcOS can be swapped so as to make functional chimeric αα synthases. Notably, both cyclization fidelity and catalytic efficiency are altered in all chimeric synthases. Twelve newly formed and uncharacterized C20 diterpene products and three C25 sesterterpene products are generated by these chimeras. Thus, engineered αβγ and αα terpenoid cyclases promise to generate chemodiversity in the greater family of terpenoid natural products.

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Year:  2017        PMID: 28362483      PMCID: PMC5474940          DOI: 10.1021/acs.biochem.7b00137

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  59 in total

1.  Bifunctional abietadiene synthase: mutual structural dependence of the active sites for protonation-initiated and ionization-initiated cyclizations.

Authors:  Reuben J Peters; Ora A Carter; Yan Zhang; Brian W Matthews; Rodney B Croteau
Journal:  Biochemistry       Date:  2003-03-11       Impact factor: 3.162

Review 2.  Why do plants produce so many terpenoid compounds?

Authors:  Eran Pichersky; Robert A Raguso
Journal:  New Phytol       Date:  2016-09-08       Impact factor: 10.151

Review 3.  Terpene synthases and the regulation, diversity and biological roles of terpene metabolism.

Authors:  Dorothea Tholl
Journal:  Curr Opin Plant Biol       Date:  2006-04-04       Impact factor: 7.834

4.  Fusicoccin-A selectively induces apoptosis in tumor cells after interferon-alpha priming.

Authors:  Ingrid J de Vries-van Leeuwen; Chantal Kortekaas-Thijssen; Jean A Nzigou Mandouckou; Sjors Kas; Antonio Evidente; Albertus H de Boer
Journal:  Cancer Lett       Date:  2010-02-13       Impact factor: 8.679

5.  Identification of ophiobolin F synthase by a genome mining approach: a sesterterpene synthase from Aspergillus clavatus.

Authors:  Ryota Chiba; Atsushi Minami; Katsuya Gomi; Hideaki Oikawa
Journal:  Org Lett       Date:  2013-01-16       Impact factor: 6.005

6.  Structural Studies of Geosmin Synthase, a Bifunctional Sesquiterpene Synthase with αα Domain Architecture That Catalyzes a Unique Cyclization-Fragmentation Reaction Sequence.

Authors:  Golda G Harris; Patrick M Lombardi; Travis A Pemberton; Tsutomu Matsui; Thomas M Weiss; Kathryn E Cole; Mustafa Köksal; Frank V Murphy; L Sangeetha Vedula; Wayne K W Chou; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2015-11-24       Impact factor: 3.162

7.  Transannular proton transfer in the cyclization of geranylgeranyl diphosphate to fusicoccadiene, a biosynthetic intermediate of fusicoccins.

Authors:  Tomonobu Toyomasu; Mai Tsukahara; Hiromichi Kenmoku; Masahide Anada; Hajime Nitta; Junko Ohkanda; Wataru Mitsuhashi; Takeshi Sassa; Nobuo Kato
Journal:  Org Lett       Date:  2009-07-16       Impact factor: 6.005

8.  Alternative termination chemistries utilized by monoterpene cyclases: chimeric analysis of bornyl diphosphate, 1,8-cineole, and sabinene synthases.

Authors:  Reuben J Peters; Rodney B Croteau
Journal:  Arch Biochem Biophys       Date:  2003-09-15       Impact factor: 4.013

9.  Purification and characterization of taxa-4(5),11(12)-diene synthase from Pacific yew (Taxus brevifolia) that catalyzes the first committed step of taxol biosynthesis.

Authors:  M Hezari; N G Lewis; R Croteau
Journal:  Arch Biochem Biophys       Date:  1995-10-01       Impact factor: 4.013

10.  Functional plasticity of paralogous diterpene synthases involved in conifer defense.

Authors:  Christopher I Keeling; Sabrina Weisshaar; Roy P C Lin; Jörg Bohlmann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-15       Impact factor: 11.205

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  12 in total

Review 1.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

Review 2.  Engineering plant family TPS into cyanobacterial host for terpenoids production.

Authors:  Akhil Rautela; Sanjay Kumar
Journal:  Plant Cell Rep       Date:  2022-07-05       Impact factor: 4.964

3.  Discovery of non-squalene triterpenes.

Authors:  Hui Tao; Lukas Lauterbach; Guangkai Bian; Rong Chen; Anwei Hou; Takahiro Mori; Shu Cheng; Ben Hu; Li Lu; Xin Mu; Min Li; Naruhiko Adachi; Masato Kawasaki; Toshio Moriya; Toshiya Senda; Xinghuan Wang; Zixin Deng; Ikuro Abe; Jeroen S Dickschat; Tiangang Liu
Journal:  Nature       Date:  2022-06-01       Impact factor: 69.504

4.  Structural insight on assembly-line catalysis in terpene biosynthesis.

Authors:  Jacque L Faylo; Trevor van Eeuwen; Hee Jong Kim; Jose J Gorbea Colón; Benjamin A Garcia; Kenji Murakami; David W Christianson
Journal:  Nat Commun       Date:  2021-06-09       Impact factor: 14.919

5.  Toxicity, Pharmacokinetics, and Gut Microbiome of Oral Administration of Sesterterpene MHO7 Derived from a Marine Fungus.

Authors:  Wei Tian; Liang Yang; Di Wu; Zixin Deng; Kui Hong
Journal:  Mar Drugs       Date:  2019-11-26       Impact factor: 5.118

6.  Heterologous Production of β-Caryophyllene and Evaluation of Its Activity against Plant Pathogenic Fungi.

Authors:  Fabienne Hilgers; Samer S Habash; Anita Loeschcke; Yannic Sebastian Ackermann; Stefan Neumann; Achim Heck; Oliver Klaus; Jennifer Hage-Hülsmann; Florian M W Grundler; Karl-Erich Jaeger; A Sylvia S Schleker; Thomas Drepper
Journal:  Microorganisms       Date:  2021-01-14

Review 7.  Assembly-Line Catalysis in Bifunctional Terpene Synthases.

Authors:  Jacque L Faylo; Trey A Ronnebaum; David W Christianson
Journal:  Acc Chem Res       Date:  2021-07-13       Impact factor: 24.466

8.  Genome mining in Trichoderma viride J1-030: discovery and identification of novel sesquiterpene synthase and its products.

Authors:  Xiang Sun; You-Sheng Cai; Yujie Yuan; Guangkai Bian; Ziling Ye; Zixin Deng; Tiangang Liu
Journal:  Beilstein J Org Chem       Date:  2019-08-28       Impact factor: 2.883

Review 9.  Diterpenes Specially Produced by Fungi: Structures, Biological Activities, and Biosynthesis (2010-2020).

Authors:  Fa-Lei Zhang; Tao Feng
Journal:  J Fungi (Basel)       Date:  2022-02-28

10.  Systematic mining of fungal chimeric terpene synthases using an efficient precursor-providing yeast chassis.

Authors:  Rong Chen; Qidong Jia; Xin Mu; Ben Hu; Xiang Sun; Zixin Deng; Feng Chen; Guangkai Bian; Tiangang Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-20       Impact factor: 11.205

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