Literature DB >> 36037799

Structure of the Repurposed Fungal Terpene Cyclase FlvF Implicated in the C-N Bond-Forming Reaction of Flavunoidine Biosynthesis.

Margarita A Tararina1, Danielle A Yee2, Yi Tang2,3, David W Christianson1.   

Abstract

The fungal species Aspergillus flavus produces an alkaloid terpenoid, flavunoidine, through a hybrid biosynthetic pathway combining both terpene cyclase and nonribosomal peptide synthetase enzymes. Flavunoidine consists of a tetracyclic, oxygenated sesquiterpene core decorated with dimethyl cadaverine and 5,5-dimethyl-l-pipecolate moieties. Unique to the flavunoidine biosynthetic pathway is FlvF, a putative enzyme implicated in stereospecific C-N bond formation as dimethyl cadaverine is linked to the sesquiterpene core to generate pre-flavunoidine. Here, we report the 2.6 Å resolution crystal structure of FlvF, which adopts the α-helical fold of a class I terpene synthase. However, FlvF is not a terpene synthase, as indicated by its lack of enzymatic activity with farnesyl diphosphate and its lack of signature metal ion binding motifs that would coordinate to catalytic Mg2+ ions. Thus, FlvF is the first example of a protein that adopts a terpene synthase fold but is not a terpene synthase. Two Bis-Tris molecules bind in the active site of FlvF, and the binding of these ligands guided the docking of pre-flavunoidine to generate a model of the enzyme-product complex. Phylogenetic analysis of FlvF and related fungal homologues reveals conservation of residues that interact with the tetracyclic sesquiterpene in this model, but less conservation of residues interacting with the pendant amino moiety. This may hint toward the possibility that alternative amino substrates can be linked to a common sesquiterpene core by FlvF homologues to generate flavunoidine congeners, such as the phospholipase C inhibitor hispidospermidin.

Entities:  

Mesh:

Substances:

Year:  2022        PMID: 36037799      PMCID: PMC9489668          DOI: 10.1021/acs.biochem.2c00335

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.321


  48 in total

1.  Natural Products as Sources of New Drugs over the Nearly Four Decades from 01/1981 to 09/2019.

Authors:  David J Newman; Gordon M Cragg
Journal:  J Nat Prod       Date:  2020-03-12       Impact factor: 4.050

2.  Chemistry of fungal meroterpenoid cyclases.

Authors:  Lena Barra; Ikuro Abe
Journal:  Nat Prod Rep       Date:  2020-10-01       Impact factor: 13.423

3.  Compartmentalized biosynthesis of mycophenolic acid.

Authors:  Wei Zhang; Lei Du; Zepeng Qu; Xingwang Zhang; Fengwei Li; Zhong Li; Feifei Qi; Xiao Wang; Yuanyuan Jiang; Ping Men; Jingran Sun; Shaona Cao; Ce Geng; Fengxia Qi; Xiaobo Wan; Changning Liu; Shengying Li
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-17       Impact factor: 11.205

4.  Reconstitution of a fungal meroterpenoid biosynthesis reveals the involvement of a novel family of terpene cyclases.

Authors:  Takayuki Itoh; Kinya Tokunaga; Yudai Matsuda; Isao Fujii; Ikuro Abe; Yutaka Ebizuka; Tetsuo Kushiro
Journal:  Nat Chem       Date:  2010-08-01       Impact factor: 24.427

5.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

6.  ColabFold: making protein folding accessible to all.

Authors:  Milot Mirdita; Sergey Ovchinnikov; Martin Steinegger; Konstantin Schütze; Yoshitaka Moriwaki; Lim Heo
Journal:  Nat Methods       Date:  2022-05-30       Impact factor: 47.990

Review 7.  Multi-domain terpenoid cyclase architecture and prospects for proximity in bifunctional catalysis.

Authors:  Mengbin Chen; Golda G Harris; Travis A Pemberton; David W Christianson
Journal:  Curr Opin Struct Biol       Date:  2016-06-07       Impact factor: 6.809

8.  Genome Mining of Alkaloidal Terpenoids from a Hybrid Terpene and Nonribosomal Peptide Biosynthetic Pathway.

Authors:  Danielle A Yee; Thomas B Kakule; Wei Cheng; Mengbin Chen; Christine T Y Chong; Yang Hai; Leibniz F Hang; Yiu-Sun Hung; Nicholas Liu; Masao Ohashi; Ikechukwu C Okorafor; Yongxiang Song; Mancheng Tang; Zhuan Zhang; Yi Tang
Journal:  J Am Chem Soc       Date:  2020-01-03       Impact factor: 15.419

Review 9.  Reconstitution of Polyketide-Derived Meroterpenoid Biosynthetic Pathway in Aspergillus oryzae.

Authors:  Takayoshi Awakawa; Ikuro Abe
Journal:  J Fungi (Basel)       Date:  2021-06-16

10.  Quantitative sequence-function relationships in proteins based on gene ontology.

Authors:  Vineet Sangar; Daniel J Blankenberg; Naomi Altman; Arthur M Lesk
Journal:  BMC Bioinformatics       Date:  2007-08-08       Impact factor: 3.169

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.