Literature DB >> 35446557

Identification and Characterization of Bifunctional Drimenol Synthases of Marine Bacterial Origin.

Nhu Ngoc Quynh Vo1, Yuhta Nomura2, Kiyomi Kinugasa1,3, Hiroshi Takagi1, Shunji Takahashi1,3.   

Abstract

Natural drimane-type sesquiterpenes, including drimenol, display diverse biological activities. These active compounds are distributed in plants and fungi; however, their accumulation in bacteria remains unknown. Consequently, bacterial drimane-type sesquiterpene synthases remain to be characterized. Here, we report five drimenol synthases (DMSs) of marine bacterial origin, all belonging to the haloacid dehalogenase (HAD)-like hydrolase superfamily with the conserved DDxxE motif typical of class I terpene synthases and the DxDTT motif found in class II diterpene synthases. They catalyze two continuous reactions: the cyclization of farnesyl pyrophosphate (FPP) into drimenyl pyrophosphate and dephosphorylation of drimenyl pyrophosphate into drimenol. Protein structure modeling of the characterized Aquimarina spongiae DMS (AsDMS) suggests that the FPP substrate is located within the interdomain created by the DDxxE motif of N-domain and DxDTT motif of C-domain. Biochemical analysis revealed two aspartate residues of the DDxxE motif that might contribute to the capture of the pyrophosphate moiety of FPP inside the catalytic site of AsDMS, which is essential for efficient cyclization and subsequent dephosphorylation reactions. The middle aspartate residue of the DxDTT motif is also critical for cyclization. Thus, AsDMS utilizes both motifs in the reactions. Remarkably, the unique protein architecture of AsDMS, which is characterized by the fusion of a HAD-like domain (N-domain) and a terpene synthase β domain (C-domain), significantly differentiates this new enzyme. Our findings of the first examples of bacterial DMSs suggest the biosynthesis of drimane sesquiterpenes in bacteria and shed light on the divergence of the structures and functions of terpene synthases.

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Year:  2022        PMID: 35446557      PMCID: PMC9128629          DOI: 10.1021/acschembio.2c00163

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   4.634


  52 in total

1.  Enzyme Mechanisms for Polycyclic Triterpene Formation.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-08-18       Impact factor: 15.336

2.  Activity of drimane antifeedants and related compounds against aphids, and comparative biological effects and chemical reactivity of (-)- and (+)-polygodial.

Authors:  Y Asakawa; G W Dawson; D C Griffiths; J Y Lallemand; S V Ley; K Mori; A Mudd; M Pezechk-Leclaire; J A Pickett; H Watanabe; C M Woodcock; Z Zhong-Ning
Journal:  J Chem Ecol       Date:  1988-10       Impact factor: 2.626

3.  Structure-Activity Relationships of Pentacyclic Triterpenoids as Inhibitors of Cyclooxygenase and Lipoxygenase Enzymes.

Authors:  Nhu Ngoc Quynh Vo; Yuhta Nomura; Toshiya Muranaka; Ery Odette Fukushima
Journal:  J Nat Prod       Date:  2019-11-27       Impact factor: 4.050

4.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

Review 5.  Occurrence, biological activity and synthesis of drimane sesquiterpenoids.

Authors:  B J M Jansen; Ae de Groot
Journal:  Nat Prod Rep       Date:  2004-07-15       Impact factor: 13.423

6.  Higher-order oligomerization of a chimeric αβγ bifunctional diterpene synthase with prenyltransferase and class II cyclase activities is concentration-dependent.

Authors:  Trey A Ronnebaum; Kushol Gupta; David W Christianson
Journal:  J Struct Biol       Date:  2020-01-21       Impact factor: 2.867

Review 7.  Multi-domain terpenoid cyclase architecture and prospects for proximity in bifunctional catalysis.

Authors:  Mengbin Chen; Golda G Harris; Travis A Pemberton; David W Christianson
Journal:  Curr Opin Struct Biol       Date:  2016-06-07       Impact factor: 6.809

8.  Identification of sesquiterpene synthases from Nostoc punctiforme PCC 73102 and Nostoc sp. strain PCC 7120.

Authors:  Sean A Agger; Fernando Lopez-Gallego; Thomas R Hoye; Claudia Schmidt-Dannert
Journal:  J Bacteriol       Date:  2008-07-25       Impact factor: 3.490

9.  A novel pathway for sesquiterpene biosynthesis from Z,Z-farnesyl pyrophosphate in the wild tomato Solanum habrochaites.

Authors:  Christophe Sallaud; Denis Rontein; Sandrine Onillon; Françoise Jabès; Philippe Duffé; Cécile Giacalone; Samuel Thoraval; Camille Escoffier; Gaëtan Herbette; Nathalie Leonhardt; Mathilde Causse; Alain Tissier
Journal:  Plant Cell       Date:  2009-01-20       Impact factor: 11.277

10.  Genome-wide detection of terpene synthase genes in holy basil (Ocimum sanctum L.).

Authors:  Yogesh Kumar; Feroz Khan; Shubhra Rastogi; Ajit Kumar Shasany
Journal:  PLoS One       Date:  2018-11-16       Impact factor: 3.240

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