Literature DB >> 27282766

Potential forensic use of a 33 X-InDel panel in the Argentinean population.

Mariela Caputo1,2, M A Amador3, S Santos3, D Corach4,5.   

Abstract

Polymorphic genetic markers located on the X chromosome might become a complement in particular forensic identification when the biological kinship are deficient. We analyzed forensic statistical parameters of 33 X-chromosome InDel polymorphisms in a sample of 320 individuals from Argentina. The X-chromosome InDel polymorphism (X-InDel) panel was amplified in a single multiplex PCR reaction. Hardy-Weinberg Equilibrium was determined in the female cohort, whereas the male cohort was used to calculate linkage disequilibrium (LD) tested by an extension of Fisher's exact test, D', and Chi-square values. Regarding LD, 15 markers were organized and grouped into six blocks containing two or three linked loci each, namely block I (MID356-MID357), block II (MID448804-MID3703-MID218), block III (MID3705-MID3706-MID304737), block IV (MID197147-MID3754), block V (MID3664-MID284601-MID103547), and block VI (MID3763-MID3728). The haplotype diversity was higher than 0.99 in all cases. Blocks III and VI showed the highest match probability in the studied population, whereas block II showed the lowest. The accumulated power of discrimination was 99.9999991 % in women and 99.9992925 % in men. The mean exclusion chance in trios and duos were 99.9891736 and 99.6099391 %, respectively. Since 15 markers are associated as haplotypic blocks, for a conservative treatment of the data, statistical evaluation should consider their haplotypic frequencies and the remaining 18 markers can be evaluated as independent loci.

Entities:  

Keywords:  Argentina; Forensic analysis; Linkage disequilibrium; X-InDel

Mesh:

Year:  2016        PMID: 27282766     DOI: 10.1007/s00414-016-1399-z

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  41 in total

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  5 in total

1.  Ancestral genetic legacy of the extant population of Argentina as predicted by autosomal and X-chromosomal DIPs.

Authors:  M Caputo; M A Amador; A Sala; A Riveiro Dos Santos; S Santos; D Corach
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2.  Analysis of 21 X-chromosome polymorphisms in urban and rural populations in Salta province (north-western Argentina).

Authors:  J F Ferragut; M Bassitta; V Torrens; V Albeza; N Acreche; J A Castro; C Ramon; A Picornell
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3.  Population Genetic Diversity and Clustering Analysis for Chinese Dongxiang Group With 30 Autosomal InDel Loci Simultaneously Analyzed.

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4.  Systematic Evaluation of a Novel 6-dye Direct and Multiplex PCR-CE-Based InDel Typing System for Forensic Purposes.

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5.  Genetic Structure and Forensic Feature of 38 X-Chromosome InDels in the Henan Han Chinese Population.

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  5 in total

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