Literature DB >> 30446817

Analysis of 21 X-chromosome polymorphisms in urban and rural populations in Salta province (north-western Argentina).

J F Ferragut1, M Bassitta2, V Torrens2, V Albeza3, N Acreche3, J A Castro2, C Ramon2, A Picornell2.   

Abstract

Population genetic data for 21 X-chromosome markers (Alu insertions and STRs) are reported for two populations (rural and urban) in Salta province (north-western Argentina). New variants are described, confirming the complexity and variability of some markers in this set. Results reveal Salta populations harbor a high Native American component, despite their self-recognized European ancestry. Notwithstanding the high genetic similarity of both populations, the rural sample seems to have maintained a larger Amerindian legacy. Data further show these X-linked markers, especially STRs, are highly informative in Salta populations and, therefore, can contribute to the development of a local database for forensic purposes in north-western Argentina.

Keywords:  Alu insertions; Calchaqui Valleys; Investigator Argus X-12 kit; North-western Argentina (NWA); Salta; X-STR; X-chromosome

Mesh:

Year:  2018        PMID: 30446817     DOI: 10.1007/s00414-018-1970-x

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  24 in total

Review 1.  The X chromosome in population genetics.

Authors:  Stephen F Schaffner
Journal:  Nat Rev Genet       Date:  2004-01       Impact factor: 53.242

Review 2.  Use of X-linked markers for forensic purposes.

Authors:  R Szibor; M Krawczak; S Hering; J Edelmann; E Kuhlisch; D Krause
Journal:  Int J Legal Med       Date:  2003-02-15       Impact factor: 2.686

3.  Collaborative genetic mapping of 12 forensic short tandem repeat (STR) loci on the human X chromosome.

Authors:  Michael Nothnagel; Reinhard Szibor; Oliver Vollrath; Christa Augustin; Jeanett Edelmann; Maria Geppert; Cíntia Alves; Leonor Gusmão; Marielle Vennemann; Yiping Hou; Uta-Dorothee Immel; Serena Inturri; Haibo Luo; Sabine Lutz-Bonengel; Carlo Robino; Lutz Roewer; Burkhard Rolf; Juliane Sanft; Kyoung-Jin Shin; Jeong Eun Sim; Peter Wiegand; Christian Winkler; Michael Krawczak; Sandra Hering
Journal:  Forensic Sci Int Genet       Date:  2012-03-27       Impact factor: 4.882

4.  New sequence variants detected at DXS10148, DXS10074 and DXS10134 loci.

Authors:  Iva Gomes; António Brehm; Leonor Gusmão; Peter M Schneider
Journal:  Forensic Sci Int Genet       Date:  2015-10-28       Impact factor: 4.882

5.  DXS10079, DXS10074 and DXS10075 are STRs located within a 280-kb region of Xq12 and provide stable haplotypes useful for complex kinship cases.

Authors:  Sandra Hering; Christa Augustin; Jeanett Edelmann; Micaela Heidel; Jan Dressler; Heike Rodig; Eberhard Kuhlisch; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2005-12-13       Impact factor: 2.686

6.  The STR cluster DXS10148-DXS8378-DXS10135 provides a powerful tool for X-chromosomal haplotyping at Xp22.

Authors:  Tanja Hundertmark; Sandra Hering; Jeanett Edelmann; Christa Augustin; Ines Plate; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2008-08-08       Impact factor: 2.686

7.  DNA Commission of the International Society for Forensic Genetics (ISFG): Guidelines on the use of X-STRs in kinship analysis.

Authors:  Andreas O Tillmar; Daniel Kling; John M Butler; Walther Parson; Mechthild Prinz; Peter M Schneider; Thore Egeland; Leonor Gusmão
Journal:  Forensic Sci Int Genet       Date:  2017-05-13       Impact factor: 4.882

8.  Mitochondrial DNA control region data reveal high prevalence of Native American lineages in Jujuy province, NW Argentina.

Authors:  Sergio Cardoso; Leire Palencia-Madrid; Laura Valverde; Miguel A Alfonso-Sánchez; Luis Gómez-Pérez; Emma Alfaro; Claudio M Bravi; José E Dipierri; José A Peña; Marian M de Pancorbo
Journal:  Forensic Sci Int Genet       Date:  2013-02-20       Impact factor: 4.882

9.  Analysis of uniparental lineages in two villages of Santiago Del Estero, Argentina, seat of Pueblos de Indios in colonial times.

Authors:  Maia Pauro; Angelina García; Rodrigo Nores; Darío A Demarchi
Journal:  Hum Biol       Date:  2013-10       Impact factor: 0.553

10.  Evaluation of DXS9902, DXS7132, DXS6809, DXS7133, and DXS7423 in humans and chimpanzees: sequence variation, repeat structure, and nomenclature.

Authors:  Iva Gomes; Rui Pereira; Wolfgang R Mayr; António Amorim; Angel Carracedo; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2009-06-18       Impact factor: 2.686

View more
  1 in total

1.  Ancestral genetic legacy of the extant population of Argentina as predicted by autosomal and X-chromosomal DIPs.

Authors:  M Caputo; M A Amador; A Sala; A Riveiro Dos Santos; S Santos; D Corach
Journal:  Mol Genet Genomics       Date:  2021-02-13       Impact factor: 3.291

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.