Literature DB >> 27282231

A review of the applications of data mining and machine learning for the prediction of biomedical properties of nanoparticles.

David E Jones1, Hamidreza Ghandehari2, Julio C Facelli3.   

Abstract

This article presents a comprehensive review of applications of data mining and machine learning for the prediction of biomedical properties of nanoparticles of medical interest. The papers reviewed here present the results of research using these techniques to predict the biological fate and properties of a variety of nanoparticles relevant to their biomedical applications. These include the influence of particle physicochemical properties on cellular uptake, cytotoxicity, molecular loading, and molecular release in addition to manufacturing properties like nanoparticle size, and polydispersity. Overall, the results are encouraging and suggest that as more systematic data from nanoparticles becomes available, machine learning and data mining would become a powerful aid in the design of nanoparticles for biomedical applications. There is however the challenge of great heterogeneity in nanoparticles, which will make these discoveries more challenging than for traditional small molecule drug design.
Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Data mining; Machine learning; Nanoinformatics; Nanomedicine

Mesh:

Year:  2016        PMID: 27282231      PMCID: PMC4902872          DOI: 10.1016/j.cmpb.2016.04.025

Source DB:  PubMed          Journal:  Comput Methods Programs Biomed        ISSN: 0169-2607            Impact factor:   5.428


  42 in total

1.  Novel variable selection quantitative structure--property relationship approach based on the k-nearest-neighbor principle

Authors: 
Journal:  J Chem Inf Comput Sci       Date:  2000-01

2.  Processing/formulation parameters determining dispersity of chitosan particles: an ANNs study.

Authors:  Elina Esmaeilzadeh-Gharehdaghi; Mohammad Ali Faramarzi; Mohammad Ali Amini; Esmaeil Moazeni; Amir Amani
Journal:  J Microencapsul       Date:  2013-06-24       Impact factor: 3.142

3.  Modeling biological activities of nanoparticles.

Authors:  V Chandana Epa; Frank R Burden; Carlos Tassa; Ralph Weissleder; Stanley Shaw; David A Winkler
Journal:  Nano Lett       Date:  2012-10-09       Impact factor: 11.189

Review 4.  Nano(Q)SAR: Challenges, pitfalls and perspectives.

Authors:  Ratna Tantra; Ceyda Oksel; Tomasz Puzyn; Jian Wang; Kenneth N Robinson; Xue Z Wang; Cai Y Ma; Terry Wilkins
Journal:  Nanotoxicology       Date:  2014-09-11       Impact factor: 5.913

Review 5.  Barriers to drug delivery in solid tumors.

Authors:  R K Jain
Journal:  Sci Am       Date:  1994-07       Impact factor: 2.142

6.  Classification NanoSAR development for cytotoxicity of metal oxide nanoparticles.

Authors:  Rong Liu; Robert Rallo; Saji George; Zhaoxia Ji; Sumitra Nair; André E Nel; Yoram Cohen
Journal:  Small       Date:  2011-03-24       Impact factor: 13.281

Review 7.  State-of-the-art in design rules for drug delivery platforms: lessons learned from FDA-approved nanomedicines.

Authors:  Charlene M Dawidczyk; Chloe Kim; Jea Ho Park; Luisa M Russell; Kwan Hyi Lee; Martin G Pomper; Peter C Searson
Journal:  J Control Release       Date:  2014-05-27       Impact factor: 9.776

8.  [General mechanism of intratumor accumulation of macromolecules: advantage of macromolecular therapeutics].

Authors:  Y Matsumura; T Oda; H Maeda
Journal:  Gan To Kagaku Ryoho       Date:  1987-03

9.  Optimizing particle size for targeting diseased microvasculature: from experiments to artificial neural networks.

Authors:  Daniela P Boso; Sei-Young Lee; Mauro Ferrari; Bernhard A Schrefler; Paolo Decuzzi
Journal:  Int J Nanomedicine       Date:  2011-07-19

10.  Nanoinformatics: a new area of research in nanomedicine.

Authors:  Victor Maojo; Martin Fritts; Diana de la Iglesia; Raul E Cachau; Miguel Garcia-Remesal; Joyce A Mitchell; Casimir Kulikowski
Journal:  Int J Nanomedicine       Date:  2012-07-24
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  11 in total

1.  QSPR modeling of optical rotation of amino acids using specific quantum chemical descriptors.

Authors:  Karina Kapusta; Natalia Sizochenko; Sedat Karabulut; Sergiy Okovytyy; Eugene Voronkov; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2018-02-17       Impact factor: 1.810

2.  Exploiting machine learning for end-to-end drug discovery and development.

Authors:  Sean Ekins; Ana C Puhl; Kimberley M Zorn; Thomas R Lane; Daniel P Russo; Jennifer J Klein; Anthony J Hickey; Alex M Clark
Journal:  Nat Mater       Date:  2019-04-18       Impact factor: 43.841

Review 3.  Digital Innovation Enabled Nanomaterial Manufacturing; Machine Learning Strategies and Green Perspectives.

Authors:  Georgios Konstantopoulos; Elias P Koumoulos; Costas A Charitidis
Journal:  Nanomaterials (Basel)       Date:  2022-08-01       Impact factor: 5.719

Review 4.  Predictive Design and Analysis of Drug Transport by Multiscale Computational Models Under Uncertainty.

Authors:  Ali Aykut Akalın; Barış Dedekargınoğlu; Sae Rome Choi; Bumsoo Han; Altug Ozcelikkale
Journal:  Pharm Res       Date:  2022-06-01       Impact factor: 4.580

Review 5.  Merging data curation and machine learning to improve nanomedicines.

Authors:  Chen Chen; Zvi Yaari; Elana Apfelbaum; Piotr Grodzinski; Yosi Shamay; Daniel A Heller
Journal:  Adv Drug Deliv Rev       Date:  2022-02-18       Impact factor: 17.873

6.  Computational and Experimental Approaches to Investigate Lipid Nanoparticles as Drug and Gene Delivery Systems.

Authors:  Chun Chan; Shi Du; Yizhou Dong; Xiaolin Cheng
Journal:  Curr Top Med Chem       Date:  2021       Impact factor: 3.295

7.  Networks Models of Actin Dynamics during Spermatozoa Postejaculatory Life: A Comparison among Human-Made and Text Mining-Based Models.

Authors:  Nicola Bernabò; Alessandra Ordinelli; Marina Ramal Sanchez; Mauro Mattioli; Barbara Barboni
Journal:  Biomed Res Int       Date:  2016-08-24       Impact factor: 3.411

8.  Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine.

Authors:  Zhao Chen; Yanfeng Cao; Shuaibing He; Yanjiang Qiao
Journal:  Chin Med       Date:  2018-02-27       Impact factor: 5.455

9.  Prediction of Nanoparticle Sizes for Arbitrary Methacrylates Using Artificial Neuronal Networks.

Authors:  Julian Kimmig; Timo Schuett; Antje Vollrath; Stefan Zechel; Ulrich S Schubert
Journal:  Adv Sci (Weinh)       Date:  2021-10-23       Impact factor: 16.806

Review 10.  Enhancing Clinical Translation of Cancer Using Nanoinformatics.

Authors:  Madjid Soltani; Farshad Moradi Kashkooli; Mohammad Souri; Samaneh Zare Harofte; Tina Harati; Atefeh Khadem; Mohammad Haeri Pour; Kaamran Raahemifar
Journal:  Cancers (Basel)       Date:  2021-05-19       Impact factor: 6.639

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