| Literature DB >> 27272641 |
Xueli Chen1,2, Yuhong Chen1, Janey L Wiggs2, Louis R Pasquale2,3, Xinghuai Sun1,4,5, Bao Jian Fan2.
Abstract
Shorter axial length observed in patients with primary angle closure glaucoma (PACG) might be due to altered matrix metalloproteinase-9 (MMP9) activity resulting in ECM remodeling during eye growth and development. This study aimed to evaluate common variants in MMP9 for association with PACG. Six tag SNPs of MMP9 were genotyped in a Chinese sample of 1,030 cases, including 572 PACG and 458 primary angle closure (PAC), and 499 controls. None of 6 SNPs were significantly associated with overall PAC/PACG (P > 0.07) or with PAC/PACG subgroups (Pc > 0.18). Meta-analysis of two non-Chinese studies revealed significant association between rs17576 and PACG (ORs = 0.56, P < 0.0001); however, meta-analysis of our dataset with 4 Chinese datasets did not replicate this association (ORs = 1.23, P = 0.29). Prior significant association for rs3918249 in one Caucasian study (OR = 0.63, P = 0.006) was not replicated in meta-analysis of 3 Chinese studies including this study (ORs = 0.91, P = 0.13). Significant heterogeneity between non-Chinese and Chinese datasets precluded overall meta-analysis for rs17576 and rs3918249 (Q = 0.001 and 0.04 respectively). rs17577 was nominally associated with PACG in one Caucasian study (OR = 1.71, P = 0.02), but not in 3 Chinese studies including our study (ORs = 1.20, P = 0.07). Overall meta-analysis revealed nominal association for rs17577 and PAC/PACG (ORs = 1.26, Pc = 0.05). Meta-analysis did not show significant association between the other SNPs and PAC/PACG (P > 0.47). The largest association study to date did not find significant association between MMP9 and PAC/PACG in Chinese; meta-analysis with other Chinese datasets did not produce significant association. In most instances combination with non-Chinese datasets was not possible except for one variant showing nominally significant association. More work is needed to define the role of MMP9 variants in PACG.Entities:
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Year: 2016 PMID: 27272641 PMCID: PMC4896618 DOI: 10.1371/journal.pone.0157093
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Demographic and clinical features of cases and controls in this study.
| PAC | PACG | Acute PAC/PACG | Chronic PAC/PACG | Overall PAC/PACG | Controls | |
|---|---|---|---|---|---|---|
| 458 | 572 | 492 | 496 | 1030b | 499 | |
| 74.7 | 57.3c | 75.2 | 53.8c | 65.1c | 70.5 | |
| 57.9±11.1d | 57.8±11.8d | 58.0±11.5d | 57.9±11.7d | 57.8±11.5d | 56.0±12.7 | |
| 28.7±15.7 | 29.3±13.3 | 31.2±16.7 | 27.5±11.6 | 29.0±14.4 | N.A. | |
| 31.4±16.2d | 33.1±14.1d | 34.3±17.0d | 31.1±12.9d | 32.4±15.1d | 14.7±2.9 | |
| 0.43±0.12d | 0.88±0.09d | 0.61±0.24d | 0.80±0.20d | 0.69±0.24d | 0.35±0.11 | |
| 2.43±0.58 | 2.55±0.73 | 2.53±0.84 | 2.48±0.44 | 2.50±0.67 | N.A. | |
| 22.1±1.0d | 22.3±1.0d | 22.0±1.0d | 22.4±1.0d | 22.2±1.0d | 24.2±1.7 | |
| 552.2±36.1d | 536.9±34.0d | 548.6±37.7d | 538.8±33.3d | 543.7±35.8d | 528.8±33.6 |
All data were presented as (mean±standard deviation) except gender which was presented as percentage.
Abbreviations: IOP, intraocular pressure; N.A., not available; PAC, primary angle closure; PACG, primary angle closure glaucoma.
a Age at diagnosis for cases and age at enrollment for controls.
b Including 42 patients who were not able to be classified into either acute or chronic PAC/PACG.
c P < 0.05 compared to controls according to Chi-squared test.
d P < 0.05 compared to controls according to Mann-Whitney U test.
Single-SNP association analysis of MMP9 tag SNPs with PACG in this study.
| MAF | PAC | PACG | Overall PAC/PACG | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP | MA | PAC | PACG | Overall PAC/PACG | Controls | OR (95%CI) | OR (95%CI) | OR (95%CI) | |||
| rs4810482 | T | 0.27 | 0.29 | 0.28 | 0.31 | 0.80 (0.65–0.98) | 0.03 | 0.94 (0.78–1.14) | 0.51 | 0.86 (0.73–1.02) | 0.11 |
| rs3918249 | T | 0.27 | 0.29 | 0.28 | 0.31 | 0.81 (0.66–0.99) | 0.04 | 0.94 (0.78–1.14) | 0.53 | 0.87 (0.74–1.03) | 0.14 |
| rs17576 | A | 0.28 | 0.30 | 0.29 | 0.31 | 0.85 (0.70–1.04) | 0.12 | 0.96 (0.80–1.16) | 0.68 | 0.90 (0.76–1.06) | 0.27 |
| rs3918254 | T | 0.19 | 0.18 | 0.19 | 0.16 | 1.24 (0.98–1.57) | 0.08 | 1.16 (0.93–1.45) | 0.19 | 1.21 (0.99–1.48) | 0.08 |
| rs3787268 | A | 0.40 | 0.38 | 0.39 | 0.41 | 0.96 (0.79–1.15) | 0.65 | 0.86 (0.72–1.02) | 0.08 | 0.90 (0.77–1.05) | 0.17 |
| rs17577 | A | 0.15 | 0.15 | 0.15 | 0.12 | 1.22 (0.93–1.60) | 0.16 | 1.23 (0.95–1.59) | 0.11 | 1.23 (0.98–1.55) | 0.07 |
Abbreviation: MA, minor allele; MAF, minor allele frequency; PAC, primary angle closure; PACG, primary angle closure glaucoma. The Bonferroni corrected significance level was set as 0.008 (0.05/6).