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Literature DB >> 27247238

XPA: A key scaffold for human nucleotide excision repair.

Norie Sugitani¹, Robert M Sivley¹, Kelly E Perry¹, John A Capra¹, Walter J Chazin².

Abstract

Nucleotide excision repair (NER) is essential for removing many types of DNA lesions from the genome, yet the mechanisms of NER in humans remain poorly understood. This review summarizes our current understanding of the structure, biochemistry, interaction partners, mechanisms, and disease-associated mutations of one of the critical NER proteins, XPA.

Entities: Chemical Disease Gene Mutation Species

Keywords: DNA repair; NER; XPA; Xeroderma pigmentosum.

Mesh：

Substances：

Year: 2016 PMID： 27247238 PMCID： PMC4958585 DOI： 10.1016/j.dnarep.2016.05.018

Source DB: PubMed Journal: DNA Repair (Amst) ISSN： 1568-7856

126 in total

1. Solution structure of the N-terminal domain of the human TFIIH MAT1 subunit: new insights into the RING finger family.

Authors: V Gervais; D Busso; E Wasielewski; A Poterszman; J M Egly; J C Thierry; B Kieffer
Journal: J Biol Chem Date: 2000-10-30 Impact factor: 5.157

2. A novel 5 nucleotide deletion in XPA gene is associated with severe neurological abnormalities.

Authors: Soudeh Ghafouri-Fard; Majid Fardaei; Mohammad Miryounesi
Journal: Gene Date: 2015-08-21 Impact factor: 3.688

Review 3. Molecular mechanisms of mammalian global genome nucleotide excision repair.

Authors: Ludovic C J Gillet; Orlando D Schärer
Journal: Chem Rev Date: 2006-02 Impact factor: 60.622

4. Coordination of dual incision and repair synthesis in human nucleotide excision repair.

Authors: Lidija Staresincic; Adebanke F Fagbemi; Jacqueline H Enzlin; Audrey M Gourdin; Nils Wijgers; Isabelle Dunand-Sauthier; Giuseppina Giglia-Mari; Stuart G Clarkson; Wim Vermeulen; Orlando D Schärer
Journal: EMBO J Date: 2009-03-12 Impact factor: 11.598

Review 5. Nucleotide excision repair in eukaryotes.

Authors: Orlando D Schärer
Journal: Cold Spring Harb Perspect Biol Date: 2013-10-01 Impact factor: 10.005

Review 6. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism.

Authors: M S Wold
Journal: Annu Rev Biochem Date: 1997 Impact factor: 23.643

7. Genotype-phenotype correlation of xeroderma pigmentosum in a Chinese Han population.

Authors: Z Sun; J Zhang; Y Guo; C Ni; J Liang; R Cheng; M Li; Z Yao
Journal: Br J Dermatol Date: 2015-02-27 Impact factor: 9.302

8. Characterization of DNA recognition by the human UV-damaged DNA-binding protein.

Authors: Y Fujiwara; C Masutani; T Mizukoshi; J Kondo; F Hanaoka; S Iwai
Journal: J Biol Chem Date: 1999-07-09 Impact factor: 5.157

9. Mechanism of early biphasic activation of poly(ADP-ribose) polymerase-1 in response to ultraviolet B radiation.

Authors: Momchil D Vodenicharov; Medini M Ghodgaonkar; Sabina S Halappanavar; Rashmi G Shah; Girish M Shah
Journal: J Cell Sci Date: 2005-01-18 Impact factor: 5.285

10. Menin localizes to chromatin through an ATR-CHK1 mediated pathway after UV-induced DNA damage.

Authors: Steven M Farley; Gao Chen; Sydney Guo; Min Wang; Jingbo A; Felix Lee; Frank Lee; Mark Sawicki
Journal: J Surg Res Date: 2006-06-01 Impact factor: 2.192

47 in total

1. Alcohol Effects on Colon Epithelium are Time-Dependent.

Authors: Faraz Bishehsari; Lijuan Zhang; Robin M Voigt; Natalie Maltby; Bita Semsarieh; Eyas Zorub; Maliha Shaikh; Sherry Wilber; Andrew R Armstrong; Seyed Sina Mirbagheri; Nailliw Z Preite; Peter Song; Alessia Stornetta; Silvia Balbo; Christopher B Forsyth; Ali Keshavarzian
Journal: Alcohol Clin Exp Res Date: 2019-07-22 Impact factor: 3.455

Review 2. Molecular Mechanisms of Arsenic-Induced Disruption of DNA Repair.

Authors: Lok Ming Tam; Nathan E Price; Yinsheng Wang
Journal: Chem Res Toxicol Date: 2020-02-07 Impact factor: 3.739

Review 3. The capacity of oocytes for DNA repair.

Authors: Jessica M Stringer; Amy Winship; Seng H Liew; Karla Hutt
Journal: Cell Mol Life Sci Date: 2018-05-10 Impact factor: 9.261

Review 4. Molecular basis for damage recognition and verification by XPC-RAD23B and TFIIH in nucleotide excision repair.

Authors: Hong Mu; Nicholas E Geacintov; Suse Broyde; Jung-Eun Yeo; Orlando D Schärer
Journal: DNA Repair (Amst) Date: 2018-08-23

5. Design and Structure-Guided Development of Novel Inhibitors of the Xeroderma Pigmentosum Group A (XPA) Protein-DNA Interaction.

Authors: Navnath S Gavande; Pamela VanderVere-Carozza; Akaash K Mishra; Tyler L Vernon; Katherine S Pawelczak; John J Turchi
Journal: J Med Chem Date: 2017-09-21 Impact factor: 7.446

6. Emerging roles of RNA modifications in genome integrity.

Authors: Seo Yun Lee; Jae Jin Kim; Kyle M Miller
Journal: Brief Funct Genomics Date: 2021-03-27 Impact factor: 4.241

7. Analysis of DNA binding by human factor xeroderma pigmentosum complementation group A (XPA) provides insight into its interactions with nucleotide excision repair substrates.

Authors: Norie Sugitani; Markus W Voehler; Michelle S Roh; Agnieszka M Topolska-Woś; Walter J Chazin
Journal: J Biol Chem Date: 2017-08-31 Impact factor: 5.157

XPA: A key scaffold for human nucleotide excision repair.

1. Solution structure of the N-terminal domain of the human TFIIH MAT1 subunit: new insights into the RING finger family.

2. A novel 5 nucleotide deletion in XPA gene is associated with severe neurological abnormalities.

Review 3. Molecular mechanisms of mammalian global genome nucleotide excision repair.

4. Coordination of dual incision and repair synthesis in human nucleotide excision repair.

Review 5. Nucleotide excision repair in eukaryotes.

Review 6. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism.

7. Genotype-phenotype correlation of xeroderma pigmentosum in a Chinese Han population.

8. Characterization of DNA recognition by the human UV-damaged DNA-binding protein.

9. Mechanism of early biphasic activation of poly(ADP-ribose) polymerase-1 in response to ultraviolet B radiation.

10. Menin localizes to chromatin through an ATR-CHK1 mediated pathway after UV-induced DNA damage.

1. Alcohol Effects on Colon Epithelium are Time-Dependent.

Review 2. Molecular Mechanisms of Arsenic-Induced Disruption of DNA Repair.

Review 3. The capacity of oocytes for DNA repair.

Review 4. Molecular basis for damage recognition and verification by XPC-RAD23B and TFIIH in nucleotide excision repair.

5. Design and Structure-Guided Development of Novel Inhibitors of the Xeroderma Pigmentosum Group A (XPA) Protein-DNA Interaction.

6. Emerging roles of RNA modifications in genome integrity.

7. Analysis of DNA binding by human factor xeroderma pigmentosum complementation group A (XPA) provides insight into its interactions with nucleotide excision repair substrates.

Review 8. Dynamic action of DNA repair proteins as revealed by single molecule techniques: Seeing is believing.

9. Mapping p38α mitogen-activated protein kinase signaling by proximity-dependent labeling.

Review 10. NAD⁺ in Aging: Molecular Mechanisms and Translational Implications.

Review 3. Molecular mechanisms of mammalian global genome nucleotide excision repair.

Review 5. Nucleotide excision repair in eukaryotes.

Review 6. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism.

Review 2. Molecular Mechanisms of Arsenic-Induced Disruption of DNA Repair.

Review 3. The capacity of oocytes for DNA repair.

Review 4. Molecular basis for damage recognition and verification by XPC-RAD23B and TFIIH in nucleotide excision repair.

Review 8. Dynamic action of DNA repair proteins as revealed by single molecule techniques: Seeing is believing.

Review 10. NAD+ in Aging: Molecular Mechanisms and Translational Implications.

Review 10. NAD⁺ in Aging: Molecular Mechanisms and Translational Implications.